RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 CYFIP1Q7L576 1253 aa14.46□□□□□ -0.09
CTSD-208ENST00000636843 MYOCDQ8IZQ8 938 aa14.46□□□□□ -0.09
CTSD-208ENST00000636843 CTCFLQ8NI51 663 aaPredicted RBP14.46□□□□□ -0.09
CTSD-208ENST00000636843 SMARCC2Q8TAQ2 1214 aa14.46□□□□□ -0.09
CTSD-208ENST00000636843 PIBF1Q8WXW3 757 aa14.46□□□□□ -0.09
CTSD-208ENST00000636843 SEPT8Q92599 483 aa14.46□□□□□ -0.09
CTSD-208ENST00000636843 INTS4Q96HW7 963 aaKnown RBP14.46□□□□□ -0.09
CTSD-208ENST00000636843 TMX3Q96JJ7 454 aa14.46□□□□□ -0.09
CTSD-208ENST00000636843 GPR20Q99678 358 aa14.46□□□□□ -0.09
CTSD-208ENST00000636843 LZTS2Q9BRK4 669 aa14.46□□□□□ -0.09
CTSD-208ENST00000636843 C1QTNF1Q9BXJ1 281 aa14.46□□□□□ -0.09
CTSD-208ENST00000636843 BCAS3Q9H6U6 928 aa14.46□□□□□ -0.09
CTSD-208ENST00000636843 ZNF215Q9UL58 517 aaPredicted RBP14.46□□□□□ -0.09
CTSD-208ENST00000636843 REV3LO60673 3130 aa14.46□□□□□ -0.09
CTSD-208ENST00000636843 TCF20Q9UGU0 1960 aaKnown RBP14.46□□□□□ -0.09
CTSD-208ENST00000636843 PIK3CDO00329 1044 aa14.46□□□□□ -0.1
CTSD-208ENST00000636843 TREHO43280 583 aa14.46□□□□□ -0.1
CTSD-208ENST00000636843 GNAQP50148 359 aa14.46□□□□□ -0.1
CTSD-208ENST00000636843 HTRA4P83105 476 aaPredicted RBP14.46□□□□□ -0.1
CTSD-208ENST00000636843 PCNX4Q63HM2 1172 aa14.46□□□□□ -0.1
CTSD-208ENST00000636843 TMTC2Q8N394 836 aa14.46□□□□□ -0.1
CTSD-208ENST00000636843 TM6SF1Q9BZW5 370 aa14.46□□□□□ -0.1
CTSD-208ENST00000636843 LY9Q9HBG7 655 aa14.46□□□□□ -0.1
CTSD-208ENST00000636843 RTEL1Q9NZ71 1219 aa14.46□□□□□ -0.1
CTSD-208ENST00000636843 SEC63Q9UGP8 760 aaKnown RBP14.46□□□□□ -0.1
CTSD-208ENST00000636843 MTUS1Q9ULD2 1270 aa14.46□□□□□ -0.1
CTSD-208ENST00000636843 NLRX1Q86UT6 975 aa14.45□□□□□ -0.1
CTSD-208ENST00000636843 ZNF654Q8IZM8 581 aa14.45□□□□□ -0.1
CTSD-208ENST00000636843 GIMAP8Q8ND71 665 aaPredicted RBP14.45□□□□□ -0.1
CTSD-208ENST00000636843 FBXO22Q8NEZ5 403 aa14.45□□□□□ -0.1
CTSD-208ENST00000636843 SP7Q8TDD2 431 aaPredicted RBP14.45□□□□□ -0.1
CTSD-208ENST00000636843 SAMD11Q96NU1 681 aa14.45□□□□□ -0.1
CTSD-208ENST00000636843 RBM8AQ9Y5S9 174 aaKnown RBP14.45□□□□□ -0.1
CTSD-208ENST00000636843 XIRP2A4UGR9 3374 aa14.45□□□□□ -0.1
CTSD-208ENST00000636843 MEIS2O14770 477 aa14.44□□□□□ -0.1
CTSD-208ENST00000636843 NECTIN1Q15223 517 aa14.44□□□□□ -0.1
CTSD-208ENST00000636843 USP17L6PQ6QN14 398 aa14.44□□□□□ -0.1
CTSD-208ENST00000636843 APBB2Q92870 758 aa14.44□□□□□ -0.1
CTSD-208ENST00000636843 SETD4Q9NVD3 440 aa14.44□□□□□ -0.1
CTSD-208ENST00000636843 CTSHP09668 335 aa14.43□□□□□ -0.1
CTSD-208ENST00000636843 MCM5P33992 734 aa14.43□□□□□ -0.1
CTSD-208ENST00000636843 ADAM17P78536 824 aa14.43□□□□□ -0.1
CTSD-208ENST00000636843 FAM26DQ5JW98 314 aa14.43□□□□□ -0.1
CTSD-208ENST00000636843 UTP14CQ5TAP6 766 aaKnown RBP14.43□□□□□ -0.1
CTSD-208ENST00000636843 RNF20Q5VTR2 975 aa14.43□□□□□ -0.1
CTSD-208ENST00000636843 TRIM50Q86XT4 487 aa14.43□□□□□ -0.1
CTSD-208ENST00000636843 TOP1MTQ969P6 601 aa14.43□□□□□ -0.1
CTSD-208ENST00000636843 GPRASP2Q96D09 838 aa14.43□□□□□ -0.1
CTSD-208ENST00000636843 CDHR1Q96JP9 859 aa14.43□□□□□ -0.1
CTSD-208ENST00000636843 TMEM87BQ96K49 555 aa14.43□□□□□ -0.1
CTSD-208ENST00000636843 C17orf80Q9BSJ5 609 aa14.43□□□□□ -0.1
CTSD-208ENST00000636843 NRCAMQ92823 1304 aa14.43□□□□□ -0.1
CTSD-208ENST00000636843 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.42□□□□□ -0.1
CTSD-208ENST00000636843 GOLGA6L22H0YM25 854 aa14.42□□□□□ -0.1
CTSD-208ENST00000636843 PRC1O43663 620 aa14.42□□□□□ -0.1
CTSD-208ENST00000636843 ARHGAP4P98171 946 aa14.42□□□□□ -0.1
CTSD-208ENST00000636843 PTPROQ16827 1216 aa14.42□□□□□ -0.1
CTSD-208ENST00000636843 NFXL1Q6ZNB6 911 aa14.42□□□□□ -0.1
CTSD-208ENST00000636843 RPAINQ86UA6 219 aa14.42□□□□□ -0.1
CTSD-208ENST00000636843 RASEFQ8IZ41 740 aa14.42□□□□□ -0.1
CTSD-208ENST00000636843 MRPL38Q96DV4 380 aaKnown RBP14.42□□□□□ -0.1
CTSD-208ENST00000636843 YME1L1Q96TA2 773 aa14.42□□□□□ -0.1
CTSD-208ENST00000636843 MYL10Q9BUA6 226 aa14.42□□□□□ -0.1
CTSD-208ENST00000636843 UPF3BQ9BZI7 483 aaKnown RBP14.42□□□□□ -0.1
CTSD-208ENST00000636843 UBE2ZQ9H832 354 aaPredicted RBP14.42□□□□□ -0.1
CTSD-208ENST00000636843 PSTPIP2Q9H939 334 aa14.42□□□□□ -0.1
CTSD-208ENST00000636843 BRWD1Q9NSI6 2320 aa14.42□□□□□ -0.1
CTSD-208ENST00000636843 COL4A4P53420 1690 aaPredicted RBP14.41□□□□□ -0.1
CTSD-208ENST00000636843 CCDC69A6NI79 296 aa14.41□□□□□ -0.1
CTSD-208ENST00000636843 CALM1P0DP23 149 aa14.41□□□□□ -0.1
CTSD-208ENST00000636843 CALM2P0DP24 149 aa14.41□□□□□ -0.1
CTSD-208ENST00000636843 CALM3P0DP25 149 aa14.41□□□□□ -0.1
CTSD-208ENST00000636843 PSMA5P28066 241 aa14.41□□□□□ -0.1
CTSD-208ENST00000636843 LIFRP42702 1097 aa14.41□□□□□ -0.1
CTSD-208ENST00000636843 SP4Q02446 784 aa14.41□□□□□ -0.1
CTSD-208ENST00000636843 SKOR2Q2VWA4 1001 aaPredicted RBP14.41□□□□□ -0.1
CTSD-208ENST00000636843 EPC2Q52LR7 807 aa14.41□□□□□ -0.1
CTSD-208ENST00000636843 SRBD1Q8N5C6 995 aaKnown RBP14.41□□□□□ -0.1
CTSD-208ENST00000636843 LMBR1Q8WVP7 490 aa14.41□□□□□ -0.1
CTSD-208ENST00000636843 MICAL3Q7RTP6 2002 aa14.41□□□□□ -0.1
CTSD-208ENST00000636843 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.41□□□□□ -0.1
CTSD-208ENST00000636843 SH2B2O14492 632 aaPredicted RBP14.41□□□□□ -0.1
CTSD-208ENST00000636843 UPP2O95045 317 aa14.41□□□□□ -0.1
CTSD-208ENST00000636843 PLEKHA8P1O95397 391 aa14.41□□□□□ -0.1
CTSD-208ENST00000636843 TCF7P36402 384 aaPredicted RBP14.41□□□□□ -0.1
CTSD-208ENST00000636843 LEXMQ3ZCV2 418 aa14.41□□□□□ -0.1
CTSD-208ENST00000636843 CREB3L3Q68CJ9 461 aa14.41□□□□□ -0.1
CTSD-208ENST00000636843 TAF2Q6P1X5 1199 aa14.41□□□□□ -0.1
CTSD-208ENST00000636843 SEPT1Q8WYJ6 367 aa14.41□□□□□ -0.1
CTSD-208ENST00000636843 IFIH1Q9BYX4 1025 aaKnown RBP14.41□□□□□ -0.1
CTSD-208ENST00000636843 OSBPL7Q9BZF2 842 aa14.41□□□□□ -0.1
CTSD-208ENST00000636843 ZSWIM6Q9HCJ5 1215 aa14.41□□□□□ -0.1
CTSD-208ENST00000636843 RAPGEFL1Q9UHV5 662 aa14.41□□□□□ -0.1
CTSD-208ENST00000636843 TELO2Q9Y4R8 837 aa14.41□□□□□ -0.1
CTSD-208ENST00000636843 CYP46A1Q9Y6A2 500 aa14.41□□□□□ -0.1
CTSD-208ENST00000636843 SIP14410 1827 aa14.4□□□□□ -0.1
CTSD-208ENST00000636843 H3BNC9 293 aa14.4□□□□□ -0.1
CTSD-208ENST00000636843 MAFGO15525 162 aa14.4□□□□□ -0.1
CTSD-208ENST00000636843 TRAK2O60296 914 aa14.4□□□□□ -0.1
CTSD-208ENST00000636843 KCNA2P16389 499 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms