RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 ADAM17P78536 824 aa21.19■□□□□ 0.98
CLN6-212ENST00000636020 ALX1Q15699 326 aa21.19■□□□□ 0.98
CLN6-212ENST00000636020 KLHL23Q8NBE8 558 aa21.19■□□□□ 0.98
CLN6-212ENST00000636020 POF1BQ8WVV4 589 aa21.19■□□□□ 0.98
CLN6-212ENST00000636020 PDCD2LQ9BRP1 358 aa21.19■□□□□ 0.98
CLN6-212ENST00000636020 MRPL11Q9Y3B7 192 aaKnown RBP21.19■□□□□ 0.98
CLN6-212ENST00000636020 CACNA1BQ00975 2339 aa21.19■□□□□ 0.98
CLN6-212ENST00000636020 GHRP10912 638 aa21.18■□□□□ 0.98
CLN6-212ENST00000636020 MYCLP12524 364 aaPredicted RBP21.18■□□□□ 0.98
CLN6-212ENST00000636020 ATP8B4Q8TF62 1192 aa21.18■□□□□ 0.98
CLN6-212ENST00000636020 NKD2Q969F2 451 aaPredicted RBP21.18■□□□□ 0.98
CLN6-212ENST00000636020 MLXIPQ9HAP2 919 aa21.18■□□□□ 0.98
CLN6-212ENST00000636020 CCER2I3L3R5 266 aa21.17■□□□□ 0.98
CLN6-212ENST00000636020 CFBP00751 764 aa21.17■□□□□ 0.98
CLN6-212ENST00000636020 HSD17B4P51659 736 aa21.17■□□□□ 0.98
CLN6-212ENST00000636020 FRMD5Q7Z6J6 570 aa21.17■□□□□ 0.98
CLN6-212ENST00000636020 VSIG10LQ86VR7 867 aa21.17■□□□□ 0.98
CLN6-212ENST00000636020 CMTR2Q8IYT2 770 aaKnown RBP21.17■□□□□ 0.98
CLN6-212ENST00000636020 ADGRF4Q8IZF3 695 aa21.17■□□□□ 0.98
CLN6-212ENST00000636020 ADSSL1Q8N142 457 aa21.17■□□□□ 0.98
CLN6-212ENST00000636020 TMEM105Q8N8V8 129 aa21.17■□□□□ 0.98
CLN6-212ENST00000636020 BCAS3Q9H6U6 928 aa21.17■□□□□ 0.98
CLN6-212ENST00000636020 TLE6Q9H808 572 aa21.17■□□□□ 0.98
CLN6-212ENST00000636020 PCDHGC5Q9Y5F6 944 aa21.17■□□□□ 0.98
CLN6-212ENST00000636020 RBM10P98175 930 aaKnown RBP21.16■□□□□ 0.98
CLN6-212ENST00000636020 GHRHRQ02643 423 aa21.16■□□□□ 0.98
CLN6-212ENST00000636020 LPIN1Q14693 890 aa21.16■□□□□ 0.98
CLN6-212ENST00000636020 QRICH1Q2TAL8 776 aa21.16■□□□□ 0.98
CLN6-212ENST00000636020 CRIPAKQ8N1N5 446 aa21.16■□□□□ 0.98
CLN6-212ENST00000636020 VN1R2Q8NFZ6 395 aa21.16■□□□□ 0.98
CLN6-212ENST00000636020 GPKOWQ92917 476 aaPredicted RBP eCLIP21.16■□□□□ 0.98
CLN6-212ENST00000636020 USP26Q9BXU7 913 aa21.16■□□□□ 0.98
CLN6-212ENST00000636020 ZNF292O60281 2723 aa21.15■□□□□ 0.98
CLN6-212ENST00000636020 CCDC171Q6TFL3 1326 aa21.15■□□□□ 0.98
CLN6-212ENST00000636020 OPLAHO14841 1288 aa21.15■□□□□ 0.98
CLN6-212ENST00000636020 STOX1Q6ZVD7 989 aa21.15■□□□□ 0.98
CLN6-212ENST00000636020 ZBTB33Q86T24 672 aa21.15■□□□□ 0.98
CLN6-212ENST00000636020 CHMP4BQ9H444 224 aaKnown RBP21.15■□□□□ 0.98
CLN6-212ENST00000636020 SUPT16HQ9Y5B9 1047 aaKnown RBP21.15■□□□□ 0.98
CLN6-212ENST00000636020 KIAA1671Q9BY89 1806 aa21.14■□□□□ 0.97
CLN6-212ENST00000636020 PER2O15055 1255 aa21.14■□□□□ 0.97
CLN6-212ENST00000636020 FGAP02671 866 aa21.14■□□□□ 0.97
CLN6-212ENST00000636020 ARHGAP4P98171 946 aa21.14■□□□□ 0.97
CLN6-212ENST00000636020 MGAT3Q09327 533 aa21.14■□□□□ 0.97
CLN6-212ENST00000636020 PGM5Q15124 567 aa21.14■□□□□ 0.97
CLN6-212ENST00000636020 KREMEN2Q8NCW0 462 aa21.14■□□□□ 0.97
CLN6-212ENST00000636020 IL31RAQ8NI17 732 aa21.14■□□□□ 0.97
CLN6-212ENST00000636020 PI4K2BQ8TCG2 481 aa21.14■□□□□ 0.97
CLN6-212ENST00000636020 LMBR1Q8WVP7 490 aa21.14■□□□□ 0.97
CLN6-212ENST00000636020 S1PR5Q9H228 398 aa21.14■□□□□ 0.97
CLN6-212ENST00000636020 DNAH14Q0VDD8 3507 aa21.14■□□□□ 0.97
CLN6-212ENST00000636020 MYO10Q9HD67 2058 aa21.14■□□□□ 0.97
CLN6-212ENST00000636020 TTC41PQ6P2S7 1318 aa21.13■□□□□ 0.97
CLN6-212ENST00000636020 LINC01599Q8WXQ3 324 aa21.13■□□□□ 0.97
CLN6-212ENST00000636020 EP300Q09472 2414 aaPredicted RBP21.13■□□□□ 0.97
CLN6-212ENST00000636020 NOP56O00567 594 aaKnown RBP21.12■□□□□ 0.97
CLN6-212ENST00000636020 DUSP6Q16828 381 aa21.12■□□□□ 0.97
CLN6-212ENST00000636020 FBXO47Q5MNV8 452 aa21.12■□□□□ 0.97
CLN6-212ENST00000636020 MCTP2Q6DN12 878 aa21.12■□□□□ 0.97
CLN6-212ENST00000636020 RUFY4Q6ZNE9 571 aa21.12■□□□□ 0.97
CLN6-212ENST00000636020 RTN4RL1Q86UN2 441 aaPredicted RBP21.12■□□□□ 0.97
CLN6-212ENST00000636020 TRIM50Q86XT4 487 aa21.12■□□□□ 0.97
CLN6-212ENST00000636020 UBALD2Q8IYN6 164 aa21.12■□□□□ 0.97
CLN6-212ENST00000636020 MICAL1Q8TDZ2 1067 aa21.12■□□□□ 0.97
CLN6-212ENST00000636020 ZFP91Q96JP5 570 aaPredicted RBP21.12■□□□□ 0.97
CLN6-212ENST00000636020 NEK1Q96PY6 1258 aa21.12■□□□□ 0.97
CLN6-212ENST00000636020 DCTPP1Q9H773 170 aa21.12■□□□□ 0.97
CLN6-212ENST00000636020 JMJD4Q9H9V9 463 aa21.12■□□□□ 0.97
CLN6-212ENST00000636020 MAP3K20Q9NYL2 800 aaKnown RBP21.12■□□□□ 0.97
CLN6-212ENST00000636020 MED19A0JLT2 244 aaPredicted RBP21.11■□□□□ 0.97
CLN6-212ENST00000636020 PPFIA3O75145 1194 aa21.11■□□□□ 0.97
CLN6-212ENST00000636020 PAN2Q504Q3 1202 aaKnown RBP21.11■□□□□ 0.97
CLN6-212ENST00000636020 NPAS4Q8IUM7 802 aa21.11■□□□□ 0.97
CLN6-212ENST00000636020 CDCA3Q99618 268 aaPredicted RBP21.11■□□□□ 0.97
CLN6-212ENST00000636020 GPR20Q99678 358 aa21.11■□□□□ 0.97
CLN6-212ENST00000636020 MYH6P13533 1939 aa21.11■□□□□ 0.97
CLN6-212ENST00000636020 NRCAMQ92823 1304 aa21.1■□□□□ 0.97
CLN6-212ENST00000636020 PLXNA4Q9HCM2 1894 aa21.1■□□□□ 0.97
CLN6-212ENST00000636020 FSD2A1L4K1 749 aa21.1■□□□□ 0.97
CLN6-212ENST00000636020 BRD1O95696 1058 aa21.1■□□□□ 0.97
CLN6-212ENST00000636020 CCND2P30279 289 aa21.1■□□□□ 0.97
CLN6-212ENST00000636020 ASTLQ6HA08 431 aaPredicted RBP21.1■□□□□ 0.97
CLN6-212ENST00000636020 TAF2Q6P1X5 1199 aa21.1■□□□□ 0.97
CLN6-212ENST00000636020 TMEM184AQ6ZMB5 413 aa21.1■□□□□ 0.97
CLN6-212ENST00000636020 TSHZ1Q6ZSZ6 1077 aa21.1■□□□□ 0.97
CLN6-212ENST00000636020 DGKHQ86XP1 1220 aa21.1■□□□□ 0.97
CLN6-212ENST00000636020 PNMA1Q8ND90 353 aa21.1■□□□□ 0.97
CLN6-212ENST00000636020 VAT1LQ9HCJ6 419 aa21.1■□□□□ 0.97
CLN6-212ENST00000636020 ZNF215Q9UL58 517 aaPredicted RBP21.1■□□□□ 0.97
CLN6-212ENST00000636020 SORCS3Q9UPU3 1222 aa21.1■□□□□ 0.97
CLN6-212ENST00000636020 FRYLO94915 3013 aa21.1■□□□□ 0.97
CLN6-212ENST00000636020 KAT6AQ92794 2004 aa21.1■□□□□ 0.97
CLN6-212ENST00000636020 EPG5Q9HCE0 2579 aa21.1■□□□□ 0.97
CLN6-212ENST00000636020 PCP11498 1178 aaKnown RBP21.09■□□□□ 0.97
CLN6-212ENST00000636020 HOXA13P31271 388 aaPredicted RBP21.09■□□□□ 0.97
CLN6-212ENST00000636020 UBE3AQ05086 875 aa21.09■□□□□ 0.97
CLN6-212ENST00000636020 MTMR3Q13615 1198 aa21.09■□□□□ 0.97
CLN6-212ENST00000636020 KCNC3Q14003 757 aa21.09■□□□□ 0.97
CLN6-212ENST00000636020 ANKRD54Q6NXT1 300 aa21.09■□□□□ 0.97
CLN6-212ENST00000636020 SYCE2Q6PIF2 218 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms