RNA–Protein interactions for RNA: ENST00000635742.1

CACNA1A-216, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,910 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-216ENST00000635742 STK4Q13043 487 aa11.15□□□□□ -0.62
CACNA1A-216ENST00000635742 PAK1Q13153 545 aa11.15□□□□□ -0.62
CACNA1A-216ENST00000635742 SPC24Q8NBT2 197 aa11.15□□□□□ -0.62
CACNA1A-216ENST00000635742 NELFBQ8WX92 580 aa11.15□□□□□ -0.62
CACNA1A-216ENST00000635742 GPRASP2Q96D09 838 aa11.15□□□□□ -0.62
CACNA1A-216ENST00000635742 TRIM44Q96DX7 344 aaPredicted RBP11.15□□□□□ -0.62
CACNA1A-216ENST00000635742 LRRC27Q9C0I9 530 aa11.15□□□□□ -0.62
CACNA1A-216ENST00000635742 SAMSN1Q9NSI8 373 aaKnown RBP11.15□□□□□ -0.62
CACNA1A-216ENST00000635742 PNMA3Q9UL41 463 aa11.15□□□□□ -0.62
CACNA1A-216ENST00000635742 LOXHD1Q8IVV2 1947 aa11.14□□□□□ -0.63
CACNA1A-216ENST00000635742 PLXNB2O15031 1838 aa11.14□□□□□ -0.63
CACNA1A-216ENST00000635742 PVALEFA0A1B0GWK0 134 aa11.14□□□□□ -0.63
CACNA1A-216ENST00000635742 TRIM49BA6NDI0 452 aa11.14□□□□□ -0.63
CACNA1A-216ENST00000635742 SOWAHBA6NEL2 793 aa11.14□□□□□ -0.63
CACNA1A-216ENST00000635742 PDHXO00330 501 aa11.14□□□□□ -0.63
CACNA1A-216ENST00000635742 SLC25A27O95847 323 aa11.14□□□□□ -0.63
CACNA1A-216ENST00000635742 FANCCQ00597 558 aa11.14□□□□□ -0.63
CACNA1A-216ENST00000635742 RAD51AP2Q09MP3 1159 aa11.14□□□□□ -0.63
CACNA1A-216ENST00000635742 COASYQ13057 564 aa11.14□□□□□ -0.63
CACNA1A-216ENST00000635742 ARSHQ5FYA8 562 aa11.14□□□□□ -0.63
CACNA1A-216ENST00000635742 SPATA1Q5VX52 437 aa11.14□□□□□ -0.63
CACNA1A-216ENST00000635742 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.14□□□□□ -0.63
CACNA1A-216ENST00000635742 MIER3Q7Z3K6 550 aa11.14□□□□□ -0.63
CACNA1A-216ENST00000635742 TPH2Q8IWU9 490 aa11.14□□□□□ -0.63
CACNA1A-216ENST00000635742 FAM133AQ8N9E0 248 aa11.14□□□□□ -0.63
CACNA1A-216ENST00000635742 BANK1Q8NDB2 785 aa11.14□□□□□ -0.63
CACNA1A-216ENST00000635742 CCDC47Q96A33 483 aaKnown RBP11.14□□□□□ -0.63
CACNA1A-216ENST00000635742 MRFAP1L1Q96HT8 127 aa11.14□□□□□ -0.63
CACNA1A-216ENST00000635742 LXNQ9BS40 222 aa11.14□□□□□ -0.63
CACNA1A-216ENST00000635742 IFNKQ9P0W0 207 aa11.14□□□□□ -0.63
CACNA1A-216ENST00000635742 RWDD2AQ9UIY3 292 aa11.14□□□□□ -0.63
CACNA1A-216ENST00000635742 DNM3Q9UQ16 869 aa11.14□□□□□ -0.63
CACNA1A-216ENST00000635742 WDR81Q562E7 1941 aa11.13□□□□□ -0.63
CACNA1A-216ENST00000635742 POTEB2H3BUK9 544 aa11.13□□□□□ -0.63
CACNA1A-216ENST00000635742 ZBTB39O15060 712 aa11.13□□□□□ -0.63
CACNA1A-216ENST00000635742 EYA4O95677 639 aa11.13□□□□□ -0.63
CACNA1A-216ENST00000635742 CCNE2O96020 404 aa11.13□□□□□ -0.63
CACNA1A-216ENST00000635742 PTMAP06454 111 aaKnown RBP11.13□□□□□ -0.63
CACNA1A-216ENST00000635742 ZBTB48P10074 688 aaPredicted RBP11.13□□□□□ -0.63
CACNA1A-216ENST00000635742 KCNA2P16389 499 aa11.13□□□□□ -0.63
CACNA1A-216ENST00000635742 CDC25BP30305 580 aa11.13□□□□□ -0.63
CACNA1A-216ENST00000635742 PMS1P54277 932 aaKnown RBP11.13□□□□□ -0.63
CACNA1A-216ENST00000635742 HUNKP57058 714 aa11.13□□□□□ -0.63
CACNA1A-216ENST00000635742 ERVK-9P63128 1117 aa11.13□□□□□ -0.63
CACNA1A-216ENST00000635742 ERVK-24P63145 666 aa11.13□□□□□ -0.63
CACNA1A-216ENST00000635742 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.13□□□□□ -0.63
CACNA1A-216ENST00000635742 ANKRD23Q86SG2 305 aa11.13□□□□□ -0.63
CACNA1A-216ENST00000635742 NLRX1Q86UT6 975 aa11.13□□□□□ -0.63
CACNA1A-216ENST00000635742 FAM43AQ8N2R8 423 aa11.13□□□□□ -0.63
CACNA1A-216ENST00000635742 SYT2Q8N9I0 419 aaPredicted RBP11.13□□□□□ -0.63
CACNA1A-216ENST00000635742 DNERQ8NFT8 737 aa11.13□□□□□ -0.63
CACNA1A-216ENST00000635742 PIGOQ8TEQ8 1089 aa11.13□□□□□ -0.63
CACNA1A-216ENST00000635742 FGD4Q96M96 766 aa11.13□□□□□ -0.63
CACNA1A-216ENST00000635742 XPO4Q9C0E2 1151 aaKnown RBP11.13□□□□□ -0.63
CACNA1A-216ENST00000635742 BHMT2Q9H2M3 363 aa11.13□□□□□ -0.63
CACNA1A-216ENST00000635742 SLC39A2Q9NP94 309 aa11.13□□□□□ -0.63
CACNA1A-216ENST00000635742 TBC1D22BQ9NU19 505 aa11.13□□□□□ -0.63
CACNA1A-216ENST00000635742 SLC45A1Q9Y2W3 748 aa11.13□□□□□ -0.63
CACNA1A-216ENST00000635742 DCAF8L1A6NGE4 600 aa11.13□□□□□ -0.63
CACNA1A-216ENST00000635742 PGK2P07205 417 aa11.13□□□□□ -0.63
CACNA1A-216ENST00000635742 COPB2P35606 906 aa11.13□□□□□ -0.63
CACNA1A-216ENST00000635742 GLIS3Q8NEA6 775 aa11.13□□□□□ -0.63
CACNA1A-216ENST00000635742 NEK9Q8TD19 979 aa11.13□□□□□ -0.63
CACNA1A-216ENST00000635742 SMCR8Q8TEV9 937 aaPredicted RBP11.13□□□□□ -0.63
CACNA1A-216ENST00000635742 IWS1Q96ST2 819 aa11.13□□□□□ -0.63
CACNA1A-216ENST00000635742 RUSC1Q9BVN2 902 aa11.13□□□□□ -0.63
CACNA1A-216ENST00000635742 PORCNQ9H237 461 aa11.13□□□□□ -0.63
CACNA1A-216ENST00000635742 BCAS3Q9H6U6 928 aa11.13□□□□□ -0.63
CACNA1A-216ENST00000635742 PANK4Q9NVE7 773 aa11.13□□□□□ -0.63
CACNA1A-216ENST00000635742 TELO2Q9Y4R8 837 aa11.13□□□□□ -0.63
CACNA1A-216ENST00000635742 ZNFX1Q9P2E3 1918 aaKnown RBP11.13□□□□□ -0.63
CACNA1A-216ENST00000635742 FRMD3A2A2Y4 597 aa11.12□□□□□ -0.63
CACNA1A-216ENST00000635742 STAM2O75886 525 aa11.12□□□□□ -0.63
CACNA1A-216ENST00000635742 MUTP22033 750 aa11.12□□□□□ -0.63
CACNA1A-216ENST00000635742 EDNRBP24530 442 aa11.12□□□□□ -0.63
CACNA1A-216ENST00000635742 GIT2Q14161 759 aa11.12□□□□□ -0.63
CACNA1A-216ENST00000635742 COBLL1Q53SF7 1204 aa11.12□□□□□ -0.63
CACNA1A-216ENST00000635742 WDR78Q5VTH9 848 aa11.12□□□□□ -0.63
CACNA1A-216ENST00000635742 CDKAL1Q5VV42 579 aa11.12□□□□□ -0.63
CACNA1A-216ENST00000635742 RASAL3Q86YV0 1011 aa11.12□□□□□ -0.63
CACNA1A-216ENST00000635742 GTF3C2Q8WUA4 911 aaPredicted RBP11.12□□□□□ -0.63
CACNA1A-216ENST00000635742 MMP19Q99542 508 aa11.12□□□□□ -0.63
CACNA1A-216ENST00000635742 PTPN18Q99952 460 aa11.12□□□□□ -0.63
CACNA1A-216ENST00000635742 REEP2Q9BRK0 252 aa11.12□□□□□ -0.63
CACNA1A-216ENST00000635742 FGFBP2Q9BYJ0 223 aa11.12□□□□□ -0.63
CACNA1A-216ENST00000635742 EFCC1Q9HA90 598 aa11.12□□□□□ -0.63
CACNA1A-216ENST00000635742 MCM3APO60318 1980 aa11.12□□□□□ -0.63
CACNA1A-216ENST00000635742 PLXNA1Q9UIW2 1896 aa11.12□□□□□ -0.63
CACNA1A-216ENST00000635742 SPATA31C2B4DYI2 1134 aa11.11□□□□□ -0.63
CACNA1A-216ENST00000635742 PSMA7O14818 248 aa11.11□□□□□ -0.63
CACNA1A-216ENST00000635742 SORBS3O60504 671 aa11.11□□□□□ -0.63
CACNA1A-216ENST00000635742 KRT18P05783 430 aaKnown RBP11.11□□□□□ -0.63
CACNA1A-216ENST00000635742 KRT76Q01546 638 aa11.11□□□□□ -0.63
CACNA1A-216ENST00000635742 STIM1Q13586 685 aa11.11□□□□□ -0.63
CACNA1A-216ENST00000635742 STXBP2Q15833 593 aa11.11□□□□□ -0.63
CACNA1A-216ENST00000635742 UGCGQ16739 394 aa11.11□□□□□ -0.63
CACNA1A-216ENST00000635742 CCDC144BQ3MJ40 725 aa11.11□□□□□ -0.63
CACNA1A-216ENST00000635742 FAM26FQ5R3K3 315 aa11.11□□□□□ -0.63
CACNA1A-216ENST00000635742 TTI2Q6NXR4 508 aa11.11□□□□□ -0.63
CACNA1A-216ENST00000635742 DRC7Q8IY82 874 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms