RNA–Protein interactions for RNA: ENST00000635251.1

PSPC1-207, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 2,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-207ENST00000635251 CYP11B2P19099 503 aa11.78□□□□□ -0.52
PSPC1-207ENST00000635251 KLRC1P26715 233 aa11.78□□□□□ -0.52
PSPC1-207ENST00000635251 SHMT1P34896 483 aa11.78□□□□□ -0.52
PSPC1-207ENST00000635251 STAT3P40763 770 aa11.78□□□□□ -0.52
PSPC1-207ENST00000635251 PPFIA1Q13136 1202 aa11.78□□□□□ -0.52
PSPC1-207ENST00000635251 NAB2Q15742 525 aa11.78□□□□□ -0.52
PSPC1-207ENST00000635251 SLC18A3Q16572 532 aa11.78□□□□□ -0.52
PSPC1-207ENST00000635251 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.78□□□□□ -0.52
PSPC1-207ENST00000635251 IFT20Q8IY31 132 aa11.78□□□□□ -0.52
PSPC1-207ENST00000635251 SCFD1Q8WVM8 642 aa11.78□□□□□ -0.52
PSPC1-207ENST00000635251 ADAMTS1Q9UHI8 967 aa11.78□□□□□ -0.52
PSPC1-207ENST00000635251 PCDHA1Q9Y5I3 950 aa11.78□□□□□ -0.52
PSPC1-207ENST00000635251 PPEF1O14829 653 aaPredicted RBP11.77□□□□□ -0.52
PSPC1-207ENST00000635251 GYS1P13807 737 aa11.77□□□□□ -0.52
PSPC1-207ENST00000635251 ADRA2BP18089 450 aa11.77□□□□□ -0.52
PSPC1-207ENST00000635251 KIAA0753Q2KHM9 967 aa11.77□□□□□ -0.52
PSPC1-207ENST00000635251 QRICH1Q2TAL8 776 aa11.77□□□□□ -0.52
PSPC1-207ENST00000635251 IFT81Q8WYA0 676 aa11.77□□□□□ -0.52
PSPC1-207ENST00000635251 ANO3Q9BYT9 981 aa11.77□□□□□ -0.52
PSPC1-207ENST00000635251 COA1Q9GZY4 146 aa11.77□□□□□ -0.52
PSPC1-207ENST00000635251 GLT8D2Q9H1C3 349 aa11.77□□□□□ -0.52
PSPC1-207ENST00000635251 ATF5Q9Y2D1 282 aaPredicted RBP11.77□□□□□ -0.52
PSPC1-207ENST00000635251 PCDHA2Q9Y5H9 948 aa11.77□□□□□ -0.52
PSPC1-207ENST00000635251 A0A087X0T9 212 aa11.77□□□□□ -0.53
PSPC1-207ENST00000635251 G3V3G9 751 aa11.77□□□□□ -0.53
PSPC1-207ENST00000635251 MED24O75448 989 aa11.77□□□□□ -0.53
PSPC1-207ENST00000635251 HEXIM1O94992 359 aaKnown RBP11.77□□□□□ -0.53
PSPC1-207ENST00000635251 FAM228BP0C875 321 aa11.77□□□□□ -0.53
PSPC1-207ENST00000635251 NR2F2P24468 414 aa11.77□□□□□ -0.53
PSPC1-207ENST00000635251 MARSP56192 900 aaKnown RBP11.77□□□□□ -0.53
PSPC1-207ENST00000635251 RNASE9P60153 205 aaKnown RBP11.77□□□□□ -0.53
PSPC1-207ENST00000635251 KCNH2Q12809 1159 aa11.77□□□□□ -0.53
PSPC1-207ENST00000635251 DCAF8Q5TAQ9 597 aa11.77□□□□□ -0.53
PSPC1-207ENST00000635251 ALS2CLQ60I27 953 aa11.77□□□□□ -0.53
PSPC1-207ENST00000635251 PAXIP1Q6ZW49 1069 aaPredicted RBP11.77□□□□□ -0.53
PSPC1-207ENST00000635251 TSEN2Q8NCE0 465 aaKnown RBP11.77□□□□□ -0.53
PSPC1-207ENST00000635251 TAF4BQ92750 862 aa11.77□□□□□ -0.53
PSPC1-207ENST00000635251 SPAG5Q96R06 1193 aa11.77□□□□□ -0.53
PSPC1-207ENST00000635251 MXD3Q9BW11 206 aa11.77□□□□□ -0.53
PSPC1-207ENST00000635251 CAPS2Q9BXY5 557 aa11.77□□□□□ -0.53
PSPC1-207ENST00000635251 KCTD10Q9H3F6 313 aa11.77□□□□□ -0.53
PSPC1-207ENST00000635251 EPB41L5Q9HCM4 733 aa11.77□□□□□ -0.53
PSPC1-207ENST00000635251 USP21Q9UK80 565 aa11.77□□□□□ -0.53
PSPC1-207ENST00000635251 HDAC9Q9UKV0 1011 aa11.77□□□□□ -0.53
PSPC1-207ENST00000635251 PACSIN2Q9UNF0 486 aaPredicted RBP11.77□□□□□ -0.53
PSPC1-207ENST00000635251 MYO3BQ8WXR4 1341 aa11.77□□□□□ -0.53
PSPC1-207ENST00000635251 TAF1LQ8IZX4 1826 aa11.77□□□□□ -0.53
PSPC1-207ENST00000635251 POTEFA5A3E0 1075 aa11.76□□□□□ -0.53
PSPC1-207ENST00000635251 POTEIP0CG38 1075 aa11.76□□□□□ -0.53
PSPC1-207ENST00000635251 TNFRSF8P28908 595 aa11.76□□□□□ -0.53
PSPC1-207ENST00000635251 USP11P51784 963 aa11.76□□□□□ -0.53
PSPC1-207ENST00000635251 GUCY2DQ02846 1103 aa11.76□□□□□ -0.53
PSPC1-207ENST00000635251 CDC37Q16543 378 aaPredicted RBP11.76□□□□□ -0.53
PSPC1-207ENST00000635251 POTEGQ6S5H5 508 aa11.76□□□□□ -0.53
PSPC1-207ENST00000635251 POTEEQ6S8J3 1075 aa11.76□□□□□ -0.53
PSPC1-207ENST00000635251 PPP4R3CPQ6ZMV5 832 aa11.76□□□□□ -0.53
PSPC1-207ENST00000635251 SLFN12Q8IYM2 578 aa11.76□□□□□ -0.53
PSPC1-207ENST00000635251 ERMNQ8TAM6 284 aa11.76□□□□□ -0.53
PSPC1-207ENST00000635251 CAVIN3Q969G5 261 aa11.76□□□□□ -0.53
PSPC1-207ENST00000635251 CRAMP1Q96RY5 1269 aa11.76□□□□□ -0.53
PSPC1-207ENST00000635251 PACSIN1Q9BY11 444 aa11.76□□□□□ -0.53
PSPC1-207ENST00000635251 ZC3H12CQ9C0D7 883 aaKnown RBP11.76□□□□□ -0.53
PSPC1-207ENST00000635251 DHX36Q9H2U1 1008 aaKnown RBP11.76□□□□□ -0.53
PSPC1-207ENST00000635251 SUGT1Q9Y2Z0 365 aa11.76□□□□□ -0.53
PSPC1-207ENST00000635251 GLI1P08151 1106 aa11.76□□□□□ -0.53
PSPC1-207ENST00000635251 SLURP2P0DP57 97 aa11.76□□□□□ -0.53
PSPC1-207ENST00000635251 ACTN1P12814 892 aa11.76□□□□□ -0.53
PSPC1-207ENST00000635251 SLC20A2Q08357 652 aa11.76□□□□□ -0.53
PSPC1-207ENST00000635251 PAK2Q13177 524 aa11.76□□□□□ -0.53
PSPC1-207ENST00000635251 DOK7Q18PE1 504 aa11.76□□□□□ -0.53
PSPC1-207ENST00000635251 EDRF1Q3B7T1 1238 aa11.76□□□□□ -0.53
PSPC1-207ENST00000635251 DNAJC21Q5F1R6 531 aaKnown RBP11.76□□□□□ -0.53
PSPC1-207ENST00000635251 MEI1Q5TIA1 1274 aa11.76□□□□□ -0.53
PSPC1-207ENST00000635251 CDC42EP5Q6NZY7 148 aa11.76□□□□□ -0.53
PSPC1-207ENST00000635251 GBP6Q6ZN66 633 aa11.76□□□□□ -0.53
PSPC1-207ENST00000635251 CERS5Q8N5B7 392 aa11.76□□□□□ -0.53
PSPC1-207ENST00000635251 KRT12Q99456 494 aa11.76□□□□□ -0.53
PSPC1-207ENST00000635251 KCNMB3Q9NPA1 279 aa11.76□□□□□ -0.53
PSPC1-207ENST00000635251 LRRC4BQ9NT99 713 aa11.76□□□□□ -0.53
PSPC1-207ENST00000635251 AIPL1Q9NZN9 384 aa11.76□□□□□ -0.53
PSPC1-207ENST00000635251 NFU1Q9UMS0 254 aa11.76□□□□□ -0.53
PSPC1-207ENST00000635251 FOCADQ5VW36 1801 aa11.75□□□□□ -0.53
PSPC1-207ENST00000635251 ESYT3A0FGR9 886 aa11.75□□□□□ -0.53
PSPC1-207ENST00000635251 GRID2IPA4D2P6 1211 aa11.75□□□□□ -0.53
PSPC1-207ENST00000635251 MEIS1O00470 390 aa11.75□□□□□ -0.53
PSPC1-207ENST00000635251 SHOX2O60902 331 aaPredicted RBP11.75□□□□□ -0.53
PSPC1-207ENST00000635251 HOXA10P31260 410 aaPredicted RBP11.75□□□□□ -0.53
PSPC1-207ENST00000635251 CARSP49589 748 aaKnown RBP11.75□□□□□ -0.53
PSPC1-207ENST00000635251 IRAK1P51617 712 aa11.75□□□□□ -0.53
PSPC1-207ENST00000635251 SLC12A3P55017 1021 aa11.75□□□□□ -0.53
PSPC1-207ENST00000635251 GNGT1P63211 74 aa11.75□□□□□ -0.53
PSPC1-207ENST00000635251 PABPC4Q13310 644 aaKnown RBP eCLIP11.75□□□□□ -0.53
PSPC1-207ENST00000635251 PRR16Q569H4 304 aa11.75□□□□□ -0.53
PSPC1-207ENST00000635251 SP8Q8IXZ3 490 aa11.75□□□□□ -0.53
PSPC1-207ENST00000635251 CCDC43Q96MW1 224 aaKnown RBP11.75□□□□□ -0.53
PSPC1-207ENST00000635251 ZIM3Q96PE6 472 aa11.75□□□□□ -0.53
PSPC1-207ENST00000635251 SH3GL2Q99962 352 aa11.75□□□□□ -0.53
PSPC1-207ENST00000635251 GANQ9H2C0 597 aa11.75□□□□□ -0.53
PSPC1-207ENST00000635251 ARMCX3Q9UH62 379 aaPredicted RBP11.75□□□□□ -0.53
PSPC1-207ENST00000635251 DNM3Q9UQ16 869 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms