RNA–Protein interactions for RNA: ENST00000633109.1

LINC01002-221, Transcript of long intergenic non-protein coding RNA 1002, humanhuman

TSL 3

Gene LINC01002, Length 523 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01002-221ENST00000633109 RIPK3Q9Y572 518 aa4.34□□□□□ -1.71
LINC01002-221ENST00000633109 PCDHB9Q9Y5E1 797 aa4.34□□□□□ -1.71
LINC01002-221ENST00000633109 NCOR2Q9Y618 2525 aa4.34□□□□□ -1.72
LINC01002-221ENST00000633109 KMT2BQ9UMN6 2715 aaPredicted RBP4.34□□□□□ -1.72
LINC01002-221ENST00000633109 SCN10AQ9Y5Y9 1956 aa4.33□□□□□ -1.72
LINC01002-221ENST00000633109 ZNF536O15090 1300 aa4.33□□□□□ -1.72
LINC01002-221ENST00000633109 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.33□□□□□ -1.72
LINC01002-221ENST00000633109 A0A1W2PRU2 124 aa4.33□□□□□ -1.72
LINC01002-221ENST00000633109 ASB14A6NK59 587 aa4.33□□□□□ -1.72
LINC01002-221ENST00000633109 SPDYE3A6NKU9 549 aa4.33□□□□□ -1.72
LINC01002-221ENST00000633109 USP17L12C9JPN9 530 aa4.33□□□□□ -1.72
LINC01002-221ENST00000633109 USP17L21D6R901 530 aa4.33□□□□□ -1.72
LINC01002-221ENST00000633109 F5H6K3 240 aa4.33□□□□□ -1.72
LINC01002-221ENST00000633109 ZEB2O60315 1214 aa4.33□□□□□ -1.72
LINC01002-221ENST00000633109 PLA2G6O60733 806 aa4.33□□□□□ -1.72
LINC01002-221ENST00000633109 SURF6O75683 361 aaKnown RBP4.33□□□□□ -1.72
LINC01002-221ENST00000633109 MBD4O95243 580 aa4.33□□□□□ -1.72
LINC01002-221ENST00000633109 RASA1P20936 1047 aa4.33□□□□□ -1.72
LINC01002-221ENST00000633109 FGFR3P22607 806 aa4.33□□□□□ -1.72
LINC01002-221ENST00000633109 PURAQ00577 322 aaKnown RBP4.33□□□□□ -1.72
LINC01002-221ENST00000633109 NHLH1Q02575 133 aa4.33□□□□□ -1.72
LINC01002-221ENST00000633109 TNFAIP2Q03169 654 aa4.33□□□□□ -1.72
LINC01002-221ENST00000633109 KLRC3Q07444 240 aa4.33□□□□□ -1.72
LINC01002-221ENST00000633109 GRB10Q13322 594 aa4.33□□□□□ -1.72
LINC01002-221ENST00000633109 OS9Q13438 667 aaPredicted RBP4.33□□□□□ -1.72
LINC01002-221ENST00000633109 MCM6Q14566 821 aa4.33□□□□□ -1.72
LINC01002-221ENST00000633109 TTLL4Q14679 1199 aa4.33□□□□□ -1.72
LINC01002-221ENST00000633109 LRRFIP1Q32MZ4 808 aaKnown RBP4.33□□□□□ -1.72
LINC01002-221ENST00000633109 TKFCQ3LXA3 575 aa4.33□□□□□ -1.72
LINC01002-221ENST00000633109 LEXMQ3ZCV2 418 aa4.33□□□□□ -1.72
LINC01002-221ENST00000633109 DUSP28Q4G0W2 176 aa4.33□□□□□ -1.72
LINC01002-221ENST00000633109 SBK1Q52WX2 424 aa4.33□□□□□ -1.72
LINC01002-221ENST00000633109 CEP85Q6P2H3 762 aa4.33□□□□□ -1.72
LINC01002-221ENST00000633109 GIMAP6Q6P9H5 292 aa4.33□□□□□ -1.72
LINC01002-221ENST00000633109 CYP2U1Q7Z449 544 aa4.33□□□□□ -1.72
LINC01002-221ENST00000633109 AACSQ86V21 672 aa4.33□□□□□ -1.72
LINC01002-221ENST00000633109 HERC6Q8IVU3 1022 aa4.33□□□□□ -1.72
LINC01002-221ENST00000633109 FAM178BQ8IXR5 827 aa4.33□□□□□ -1.72
LINC01002-221ENST00000633109 AMOTL1Q8IY63 956 aa4.33□□□□□ -1.72
LINC01002-221ENST00000633109 ANKRD35Q8N283 1001 aa4.33□□□□□ -1.72
LINC01002-221ENST00000633109 PHTF2Q8N3S3 785 aa4.33□□□□□ -1.72
LINC01002-221ENST00000633109 TMEM57Q8N5G2 664 aa4.33□□□□□ -1.72
LINC01002-221ENST00000633109 MKL1Q969V6 931 aa4.33□□□□□ -1.72
LINC01002-221ENST00000633109 DDX11Q96FC9 970 aa4.33□□□□□ -1.72
LINC01002-221ENST00000633109 ABHD17AQ96GS6 310 aa4.33□□□□□ -1.72
LINC01002-221ENST00000633109 NUP88Q99567 741 aaPredicted RBP4.33□□□□□ -1.72
LINC01002-221ENST00000633109 CCDC8Q9H0W5 538 aaPredicted RBP4.33□□□□□ -1.72
LINC01002-221ENST00000633109 TRPV6Q9H1D0 765 aa4.33□□□□□ -1.72
LINC01002-221ENST00000633109 ACAD9Q9H845 621 aa4.33□□□□□ -1.72
LINC01002-221ENST00000633109 VTA1Q9NP79 307 aa4.33□□□□□ -1.72
LINC01002-221ENST00000633109 CD320Q9NPF0 282 aa4.33□□□□□ -1.72
LINC01002-221ENST00000633109 A1CFQ9NQ94 594 aaKnown RBP4.33□□□□□ -1.72
LINC01002-221ENST00000633109 FEM1BQ9UK73 627 aa4.33□□□□□ -1.72
LINC01002-221ENST00000633109 ATXN7L1Q9ULK2 861 aaPredicted RBP4.33□□□□□ -1.72
LINC01002-221ENST00000633109 TNNQ9UQP3 1299 aa4.33□□□□□ -1.72
LINC01002-221ENST00000633109 CFAP47Q6ZTR5 3102 aa4.33□□□□□ -1.72
LINC01002-221ENST00000633109 MYH8P13535 1937 aa4.33□□□□□ -1.72
LINC01002-221ENST00000633109 CEP295Q9C0D2 2601 aa4.32□□□□□ -1.72
LINC01002-221ENST00000633109 RIF1Q5UIP0 2472 aaKnown RBP4.32□□□□□ -1.72
LINC01002-221ENST00000633109 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.32□□□□□ -1.72
LINC01002-221ENST00000633109 RBM47A0AV96 593 aaKnown RBP4.32□□□□□ -1.72
LINC01002-221ENST00000633109 FAM86C2PA6NEL3 165 aa4.32□□□□□ -1.72
LINC01002-221ENST00000633109 SPATA31C2B4DYI2 1134 aa4.32□□□□□ -1.72
LINC01002-221ENST00000633109 SMIM22K7EJ46 135 aa4.32□□□□□ -1.72
LINC01002-221ENST00000633109 GOLIM4O00461 696 aa4.32□□□□□ -1.72
LINC01002-221ENST00000633109 ZBED4O75132 1171 aa4.32□□□□□ -1.72
LINC01002-221ENST00000633109 BCAR3O75815 825 aa4.32□□□□□ -1.72
LINC01002-221ENST00000633109 CXCL10P02778 98 aa4.32□□□□□ -1.72
LINC01002-221ENST00000633109 ACTN1P12814 892 aa4.32□□□□□ -1.72
LINC01002-221ENST00000633109 ALADP13716 330 aa4.32□□□□□ -1.72
LINC01002-221ENST00000633109 ATP5JP18859 108 aa4.32□□□□□ -1.72
LINC01002-221ENST00000633109 EDNRBP24530 442 aa4.32□□□□□ -1.72
LINC01002-221ENST00000633109 SCTRP47872 440 aa4.32□□□□□ -1.72
LINC01002-221ENST00000633109 MRE11P49959 708 aa4.32□□□□□ -1.72
LINC01002-221ENST00000633109 CPT1AP50416 773 aa4.32□□□□□ -1.72
LINC01002-221ENST00000633109 CCL23P55773 120 aa4.32□□□□□ -1.72
LINC01002-221ENST00000633109 BEX3Q00994 111 aa4.32□□□□□ -1.72
LINC01002-221ENST00000633109 CNTN2Q02246 1040 aa4.32□□□□□ -1.72
LINC01002-221ENST00000633109 PTPN11Q06124 597 aaPredicted RBP4.32□□□□□ -1.72
LINC01002-221ENST00000633109 CLN3Q13286 438 aa4.32□□□□□ -1.72
LINC01002-221ENST00000633109 UBE3CQ15386 1083 aa4.32□□□□□ -1.72
LINC01002-221ENST00000633109 HSP90AB4PQ58FF6 505 aa4.32□□□□□ -1.72
LINC01002-221ENST00000633109 EFHC2Q5JST6 749 aa4.32□□□□□ -1.72
LINC01002-221ENST00000633109 KRT40Q6A162 431 aa4.32□□□□□ -1.72
LINC01002-221ENST00000633109 IQSEC1Q6DN90 963 aa4.32□□□□□ -1.72
LINC01002-221ENST00000633109 TAPT1Q6NXT6 567 aa4.32□□□□□ -1.72
LINC01002-221ENST00000633109 NFRKBQ6P4R8 1299 aa4.32□□□□□ -1.72
LINC01002-221ENST00000633109 CTR9Q6PD62 1173 aa4.32□□□□□ -1.72
LINC01002-221ENST00000633109 SESTD1Q86VW0 696 aa4.32□□□□□ -1.72
LINC01002-221ENST00000633109 MICALL1Q8N3F8 863 aa4.32□□□□□ -1.72
LINC01002-221ENST00000633109 CAGE1Q8TC20 777 aa4.32□□□□□ -1.72
LINC01002-221ENST00000633109 NEK9Q8TD19 979 aa4.32□□□□□ -1.72
LINC01002-221ENST00000633109 CEP95Q96GE4 821 aa4.32□□□□□ -1.72
LINC01002-221ENST00000633109 SCLYQ96I15 445 aa4.32□□□□□ -1.72
LINC01002-221ENST00000633109 CTAGE1Q96RT6 745 aa4.32□□□□□ -1.72
LINC01002-221ENST00000633109 GRIP2Q9C0E4 1043 aa4.32□□□□□ -1.72
LINC01002-221ENST00000633109 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.32□□□□□ -1.723e-6■□□□□ 9.7
LINC01002-221ENST00000633109 UBE2ZQ9H832 354 aaPredicted RBP4.32□□□□□ -1.72
LINC01002-221ENST00000633109 ARMT1Q9H993 441 aa4.32□□□□□ -1.72
LINC01002-221ENST00000633109 TRMT13Q9NUP7 481 aaKnown RBP4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms