RNA–Protein interactions for RNA: ENST00000632421.1

PHACTR4-206, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 2

Gene PHACTR4, Length 3,375 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-206ENST00000632421 GIT2Q14161 759 aa13.53□□□□□ -0.24
PHACTR4-206ENST00000632421 PLAGL2Q9UPG8 496 aa13.53□□□□□ -0.24
PHACTR4-206ENST00000632421 BAG6P46379 1132 aa13.52□□□□□ -0.24
PHACTR4-206ENST00000632421 CHMP4BP1P59074 171 aa13.52□□□□□ -0.24
PHACTR4-206ENST00000632421 CYP4A11Q02928 519 aa13.52□□□□□ -0.24
PHACTR4-206ENST00000632421 PPP4R3CPQ6ZMV5 832 aa13.52□□□□□ -0.24
PHACTR4-206ENST00000632421 TBC1D5Q92609 795 aa13.52□□□□□ -0.24
PHACTR4-206ENST00000632421 JAKMIP2Q96AA8 810 aa13.52□□□□□ -0.24
PHACTR4-206ENST00000632421 EIF2AK1Q9BQI3 630 aaKnown RBP13.52□□□□□ -0.24
PHACTR4-206ENST00000632421 EHMT1Q9H9B1 1298 aa13.52□□□□□ -0.24
PHACTR4-206ENST00000632421 ZNF446Q9NWS9 450 aa13.52□□□□□ -0.24
PHACTR4-206ENST00000632421 FEM1BQ9UK73 627 aa13.52□□□□□ -0.24
PHACTR4-206ENST00000632421 KRT86O43790 486 aa13.52□□□□□ -0.25
PHACTR4-206ENST00000632421 SF3B2Q13435 895 aaKnown RBP13.52□□□□□ -0.25
PHACTR4-206ENST00000632421 EHBP1Q8NDI1 1231 aa13.52□□□□□ -0.25
PHACTR4-206ENST00000632421 NEK11Q8NG66 645 aa13.52□□□□□ -0.25
PHACTR4-206ENST00000632421 CCDC42Q96M95 316 aa13.52□□□□□ -0.25
PHACTR4-206ENST00000632421 REEP2Q9BRK0 252 aa13.52□□□□□ -0.25
PHACTR4-206ENST00000632421 CXCL9Q07325 125 aa13.52□□□□□ -0.25
PHACTR4-206ENST00000632421 SAMD1Q6SPF0 538 aaPredicted RBP13.52□□□□□ -0.25
PHACTR4-206ENST00000632421 KCTD17Q8N5Z5 321 aa13.52□□□□□ -0.25
PHACTR4-206ENST00000632421 SLC16A10Q8TF71 515 aa13.52□□□□□ -0.25
PHACTR4-206ENST00000632421 WDR18Q9BV38 432 aa13.52□□□□□ -0.25
PHACTR4-206ENST00000632421 EML1O00423 815 aa13.51□□□□□ -0.25
PHACTR4-206ENST00000632421 EDRF1Q3B7T1 1238 aa13.51□□□□□ -0.25
PHACTR4-206ENST00000632421 ZBED3Q96IU2 234 aaPredicted RBP13.51□□□□□ -0.25
PHACTR4-206ENST00000632421 EDEM3Q9BZQ6 932 aa13.51□□□□□ -0.25
PHACTR4-206ENST00000632421 ZSWIM4Q9H7M6 989 aa13.51□□□□□ -0.25
PHACTR4-206ENST00000632421 PUF60Q9UHX1 559 aaKnown RBP13.51□□□□□ -0.25
PHACTR4-206ENST00000632421 RABGAP1Q9Y3P9 1069 aa13.51□□□□□ -0.25
PHACTR4-206ENST00000632421 WNT10BO00744 389 aa13.51□□□□□ -0.25
PHACTR4-206ENST00000632421 EYA4O95677 639 aa13.51□□□□□ -0.25
PHACTR4-206ENST00000632421 ASNSP08243 561 aa13.51□□□□□ -0.25
PHACTR4-206ENST00000632421 MARSP56192 900 aaKnown RBP13.51□□□□□ -0.25
PHACTR4-206ENST00000632421 SPA17Q15506 151 aa13.51□□□□□ -0.25
PHACTR4-206ENST00000632421 WHAMMP3Q1A5X7 153 aa13.51□□□□□ -0.25
PHACTR4-206ENST00000632421 LRCH2Q5VUJ6 765 aa13.51□□□□□ -0.25
PHACTR4-206ENST00000632421 TMCO3Q6UWJ1 677 aa13.51□□□□□ -0.25
PHACTR4-206ENST00000632421 DEFB132Q7Z7B7 95 aa13.51□□□□□ -0.25
PHACTR4-206ENST00000632421 SFR1Q86XK3 245 aa13.51□□□□□ -0.25
PHACTR4-206ENST00000632421 ZC3H3Q8IXZ2 948 aaKnown RBP13.51□□□□□ -0.25
PHACTR4-206ENST00000632421 BHMT2Q9H2M3 363 aa13.51□□□□□ -0.25
PHACTR4-206ENST00000632421 NBPF9Q3BBW0 867 aa13.51□□□□□ -0.25
PHACTR4-206ENST00000632421 RRAGAQ7L523 313 aa13.51□□□□□ -0.25
PHACTR4-206ENST00000632421 TRIM59Q8IWR1 403 aa13.51□□□□□ -0.25
PHACTR4-206ENST00000632421 SMCR8Q8TEV9 937 aaPredicted RBP13.51□□□□□ -0.25
PHACTR4-206ENST00000632421 ZBTB9Q96C00 473 aa13.51□□□□□ -0.25
PHACTR4-206ENST00000632421 GLIS2Q9BZE0 524 aaPredicted RBP13.51□□□□□ -0.25
PHACTR4-206ENST00000632421 EPC1Q9H2F5 836 aa13.51□□□□□ -0.25
PHACTR4-206ENST00000632421 RGL1Q9NZL6 768 aa13.51□□□□□ -0.25
PHACTR4-206ENST00000632421 PGAP2Q9UHJ9 254 aa13.51□□□□□ -0.25
PHACTR4-206ENST00000632421 TFR2Q9UP52 801 aa13.51□□□□□ -0.25
PHACTR4-206ENST00000632421 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.51□□□□□ -0.25
PHACTR4-206ENST00000632421 CETN3O15182 167 aa13.5□□□□□ -0.25
PHACTR4-206ENST00000632421 CASP5P51878 434 aa13.5□□□□□ -0.25
PHACTR4-206ENST00000632421 MAP3K10Q02779 954 aa13.5□□□□□ -0.25
PHACTR4-206ENST00000632421 ADAM9Q13443 819 aa13.5□□□□□ -0.25
PHACTR4-206ENST00000632421 OTOP1Q7RTM1 612 aa13.5□□□□□ -0.25
PHACTR4-206ENST00000632421 CACNA2D4Q7Z3S7 1137 aa13.5□□□□□ -0.25
PHACTR4-206ENST00000632421 LDHDQ86WU2 507 aa13.5□□□□□ -0.25
PHACTR4-206ENST00000632421 SLC5A5Q92911 643 aa13.5□□□□□ -0.25
PHACTR4-206ENST00000632421 TUFT1Q9NNX1 390 aa13.5□□□□□ -0.25
PHACTR4-206ENST00000632421 FBXO28Q9NVF7 368 aa13.5□□□□□ -0.25
PHACTR4-206ENST00000632421 MYO6Q9UM54 1294 aa13.5□□□□□ -0.25
PHACTR4-206ENST00000632421 LRRC53A6NM62 1247 aa13.5□□□□□ -0.25
PHACTR4-206ENST00000632421 TBCAO75347 108 aaKnown RBP13.5□□□□□ -0.25
PHACTR4-206ENST00000632421 PSMD10O75832 226 aa13.5□□□□□ -0.25
PHACTR4-206ENST00000632421 PLEKP08567 350 aaPredicted RBP13.5□□□□□ -0.25
PHACTR4-206ENST00000632421 CYP27A1Q02318 531 aa13.5□□□□□ -0.25
PHACTR4-206ENST00000632421 BMS1Q14692 1282 aaKnown RBP13.5□□□□□ -0.25
PHACTR4-206ENST00000632421 CIAPIN1Q6FI81 312 aa13.5□□□□□ -0.25
PHACTR4-206ENST00000632421 ARHGAP27Q6ZUM4 889 aa13.5□□□□□ -0.25
PHACTR4-206ENST00000632421 CCDC155Q8N6L0 562 aa13.5□□□□□ -0.25
PHACTR4-206ENST00000632421 BAP1Q92560 729 aa13.5□□□□□ -0.25
PHACTR4-206ENST00000632421 TSGA10Q9BZW7 698 aa13.5□□□□□ -0.25
PHACTR4-206ENST00000632421 LACRTQ9GZZ8 138 aa13.5□□□□□ -0.25
PHACTR4-206ENST00000632421 MYOZ2Q9NPC6 264 aa13.5□□□□□ -0.25
PHACTR4-206ENST00000632421 PIM2Q9P1W9 311 aa13.5□□□□□ -0.25
PHACTR4-206ENST00000632421 ARHGAP20Q9P2F6 1191 aa13.5□□□□□ -0.25
PHACTR4-206ENST00000632421 FAM184BQ9ULE4 1060 aa13.5□□□□□ -0.25
PHACTR4-206ENST00000632421 VAV2P52735 878 aa13.49□□□□□ -0.25
PHACTR4-206ENST00000632421 TUBB4BP68371 445 aa13.49□□□□□ -0.25
PHACTR4-206ENST00000632421 UBXN2AP68543 259 aa13.49□□□□□ -0.25
PHACTR4-206ENST00000632421 AMPD2Q01433 879 aa13.49□□□□□ -0.25
PHACTR4-206ENST00000632421 KCNMA1Q12791 1236 aa13.49□□□□□ -0.25
PHACTR4-206ENST00000632421 PPP2R5CQ13362 524 aa13.49□□□□□ -0.25
PHACTR4-206ENST00000632421 CEP55Q53EZ4 464 aa13.49□□□□□ -0.25
PHACTR4-206ENST00000632421 PDXDC1Q6P996 788 aa13.49□□□□□ -0.25
PHACTR4-206ENST00000632421 EPM2AIP1Q7L775 607 aaPredicted RBP13.49□□□□□ -0.25
PHACTR4-206ENST00000632421 KRT222Q8N1A0 295 aa13.49□□□□□ -0.25
PHACTR4-206ENST00000632421 HSD17B14Q9BPX1 270 aa13.49□□□□□ -0.25
PHACTR4-206ENST00000632421 RUSC1Q9BVN2 902 aa13.49□□□□□ -0.25
PHACTR4-206ENST00000632421 DEF6Q9H4E7 631 aa13.49□□□□□ -0.25
PHACTR4-206ENST00000632421 RCCD1A6NED2 376 aa13.49□□□□□ -0.25
PHACTR4-206ENST00000632421 NR2F2P24468 414 aa13.49□□□□□ -0.25
PHACTR4-206ENST00000632421 KIF5AQ12840 1032 aa13.49□□□□□ -0.25
PHACTR4-206ENST00000632421 KNOP1Q1ED39 458 aaKnown RBP13.49□□□□□ -0.25
PHACTR4-206ENST00000632421 ZNF341Q9BYN7 854 aa13.49□□□□□ -0.25
PHACTR4-206ENST00000632421 TRAF3IP3Q9Y228 551 aa13.49□□□□□ -0.25
PHACTR4-206ENST00000632421 CHMP2AO43633 222 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms