RNA–Protein interactions for RNA: ENST00000629277.1

MECP2-218, Transcript of methyl-CpG binding protein 2, humanhuman

Gene MECP2, Length 2,558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-218ENST00000629277 BCCIPQ9P287 314 aaKnown RBP eCLIP20.56■□□□□ 0.88
MECP2-218ENST00000629277 LOC102724159A0A0B4J2E5 919 aa20.55■□□□□ 0.88
MECP2-218ENST00000629277 HSPA9P38646 679 aaKnown RBP20.55■□□□□ 0.88
MECP2-218ENST00000629277 PSMD2Q13200 908 aa20.55■□□□□ 0.88
MECP2-218ENST00000629277 PDIA5Q14554 519 aa20.55■□□□□ 0.88
MECP2-218ENST00000629277 PWP2Q15269 919 aaKnown RBP20.55■□□□□ 0.88
MECP2-218ENST00000629277 ASIC2Q16515 512 aa20.55■□□□□ 0.88
MECP2-218ENST00000629277 SCFD1Q8WVM8 642 aa20.55■□□□□ 0.88
MECP2-218ENST00000629277 DDX47Q9H0S4 455 aaKnown RBP20.55■□□□□ 0.88
MECP2-218ENST00000629277 TMEM59LQ9UK28 342 aa20.55■□□□□ 0.88
MECP2-218ENST00000629277 GOLGB1Q14789 3259 aaKnown RBP20.55■□□□□ 0.88
MECP2-218ENST00000629277 MYBP10242 640 aa20.55■□□□□ 0.88
MECP2-218ENST00000629277 RPS6KA1Q15418 735 aa20.55■□□□□ 0.88
MECP2-218ENST00000629277 HERC4Q5GLZ8 1057 aaPredicted RBP20.55■□□□□ 0.88
MECP2-218ENST00000629277 SETDB2Q96T68 719 aa20.55■□□□□ 0.88
MECP2-218ENST00000629277 RAB34Q9BZG1 259 aa20.55■□□□□ 0.88
MECP2-218ENST00000629277 GANQ9H2C0 597 aa20.55■□□□□ 0.88
MECP2-218ENST00000629277 RIOX1Q9H6W3 641 aa20.55■□□□□ 0.88
MECP2-218ENST00000629277 TMBIM4Q9HC24 238 aa20.55■□□□□ 0.88
MECP2-218ENST00000629277 KIAA1024Q9UPX6 916 aa20.55■□□□□ 0.88
MECP2-218ENST00000629277 DCDC2CA8MYV0 355 aa20.54■□□□□ 0.88
MECP2-218ENST00000629277 ITGA4P13612 1032 aa20.54■□□□□ 0.88
MECP2-218ENST00000629277 TNNC1P63316 161 aa20.54■□□□□ 0.88
MECP2-218ENST00000629277 ADAM9Q13443 819 aa20.54■□□□□ 0.88
MECP2-218ENST00000629277 TEX11Q8IYF3 940 aa20.54■□□□□ 0.88
MECP2-218ENST00000629277 WDR66Q8TBY9 1149 aa20.54■□□□□ 0.88
MECP2-218ENST00000629277 TAF4BQ92750 862 aa20.54■□□□□ 0.88
MECP2-218ENST00000629277 CEP89Q96ST8 783 aa20.54■□□□□ 0.88
MECP2-218ENST00000629277 YY1AP1Q9H869 796 aa20.54■□□□□ 0.88
MECP2-218ENST00000629277 DDX25Q9UHL0 483 aaKnown RBP20.54■□□□□ 0.88
MECP2-218ENST00000629277 PCDHA2Q9Y5H9 948 aa20.54■□□□□ 0.88
MECP2-218ENST00000629277 A6NNZ2 444 aa20.54■□□□□ 0.88
MECP2-218ENST00000629277 MARCH6O60337 910 aa20.54■□□□□ 0.88
MECP2-218ENST00000629277 PPP1R11O60927 126 aaPredicted RBP20.54■□□□□ 0.88
MECP2-218ENST00000629277 EPS15P42566 896 aa20.54■□□□□ 0.88
MECP2-218ENST00000629277 CASP5P51878 434 aa20.54■□□□□ 0.88
MECP2-218ENST00000629277 KCNH2Q12809 1159 aa20.54■□□□□ 0.88
MECP2-218ENST00000629277 SPRED3Q2MJR0 410 aa20.54■□□□□ 0.88
MECP2-218ENST00000629277 TUBB8Q3ZCM7 444 aa20.54■□□□□ 0.88
MECP2-218ENST00000629277 ISCUQ9H1K1 167 aa20.54■□□□□ 0.88
MECP2-218ENST00000629277 LUC7LQ9NQ29 371 aaKnown RBP20.54■□□□□ 0.88
MECP2-218ENST00000629277 AIPL1Q9NZN9 384 aa20.54■□□□□ 0.88
MECP2-218ENST00000629277 POTEB3A0JP26 581 aa20.53■□□□□ 0.88
MECP2-218ENST00000629277 HMGB1P1B2RPK0 211 aaPredicted RBP20.53■□□□□ 0.88
MECP2-218ENST00000629277 POTECB2RU33 542 aa20.53■□□□□ 0.88
MECP2-218ENST00000629277 H0YGN5 161 aa20.53■□□□□ 0.88
MECP2-218ENST00000629277 FSBPO95073 299 aa20.53■□□□□ 0.88
MECP2-218ENST00000629277 KIF4AO95239 1232 aa20.53■□□□□ 0.88
MECP2-218ENST00000629277 PPP4CP60510 307 aa20.53■□□□□ 0.88
MECP2-218ENST00000629277 SWT1Q5T5J6 900 aaKnown RBP20.53■□□□□ 0.88
MECP2-218ENST00000629277 POTEBQ6S5H4 581 aa20.53■□□□□ 0.88
MECP2-218ENST00000629277 PTF1AQ7RTS3 328 aa20.53■□□□□ 0.88
MECP2-218ENST00000629277 NUCKS1Q9H1E3 243 aaKnown RBP20.53■□□□□ 0.88
MECP2-218ENST00000629277 NFS1Q9Y697 457 aa20.53■□□□□ 0.88
MECP2-218ENST00000629277 ESYT2A0FGR8 921 aa20.53■□□□□ 0.88
MECP2-218ENST00000629277 SART1O43290 800 aaKnown RBP20.53■□□□□ 0.88
MECP2-218ENST00000629277 CTNNA1P35221 906 aaKnown RBP20.53■□□□□ 0.88
MECP2-218ENST00000629277 ZNF844Q08AG5 666 aa20.53■□□□□ 0.88
MECP2-218ENST00000629277 SF3B2Q13435 895 aaKnown RBP20.53■□□□□ 0.88
MECP2-218ENST00000629277 QPCTQ16769 361 aa20.53■□□□□ 0.88
MECP2-218ENST00000629277 EMC10Q5UCC4 262 aa20.53■□□□□ 0.88
MECP2-218ENST00000629277 IRF2BP2Q7Z5L9 587 aa20.53■□□□□ 0.88
MECP2-218ENST00000629277 TEX2Q8IWB9 1127 aa20.53■□□□□ 0.88
MECP2-218ENST00000629277 KCTD10Q9H3F6 313 aa20.53■□□□□ 0.88
MECP2-218ENST00000629277 CD248Q9HCU0 757 aa20.53■□□□□ 0.88
MECP2-218ENST00000629277 GCOM1H8Y6P7 765 aaPredicted RBP20.52■□□□□ 0.88
MECP2-218ENST00000629277 FAM107AO95990 144 aa20.52■□□□□ 0.88
MECP2-218ENST00000629277 MYZAPP0CAP1 466 aa20.52■□□□□ 0.88
MECP2-218ENST00000629277 STAT3P40763 770 aa20.52■□□□□ 0.88
MECP2-218ENST00000629277 AMACRQ9UHK6 382 aa20.52■□□□□ 0.88
MECP2-218ENST00000629277 SLC16A2P36021 539 aa20.52■□□□□ 0.88
MECP2-218ENST00000629277 TTBK2Q6IQ55 1244 aa20.52■□□□□ 0.88
MECP2-218ENST00000629277 CHADLQ6NUI6 762 aa20.52■□□□□ 0.88
MECP2-218ENST00000629277 AMIGO3Q86WK7 504 aa20.52■□□□□ 0.88
MECP2-218ENST00000629277 RBM46Q8TBY0 533 aaKnown RBP20.52■□□□□ 0.88
MECP2-218ENST00000629277 UBLCP1Q8WVY7 318 aaPredicted RBP20.52■□□□□ 0.88
MECP2-218ENST00000629277 CYFIP2Q96F07 1278 aa20.52■□□□□ 0.88
MECP2-218ENST00000629277 CABS1Q96KC9 395 aa20.52■□□□□ 0.88
MECP2-218ENST00000629277 PLCB1Q9NQ66 1216 aa20.52■□□□□ 0.88
MECP2-218ENST00000629277 EMILIN3Q9NT22 766 aa20.52■□□□□ 0.88
MECP2-218ENST00000629277 CNOT8Q9UFF9 292 aaKnown RBP20.52■□□□□ 0.88
MECP2-218ENST00000629277 AJAP1Q9UKB5 411 aaPredicted RBP20.52■□□□□ 0.88
MECP2-218ENST00000629277 PCDHA12Q9UN75 941 aa20.52■□□□□ 0.88
MECP2-218ENST00000629277 GOLGA6L10A6NI86 522 aa20.51■□□□□ 0.87
MECP2-218ENST00000629277 TMCO5BA8MYB1 307 aa20.51■□□□□ 0.87
MECP2-218ENST00000629277 GPBP1Q86WP2 473 aa20.51■□□□□ 0.87
MECP2-218ENST00000629277 METTL13Q8N6R0 699 aa20.51■□□□□ 0.87
MECP2-218ENST00000629277 SCFD2Q8WU76 684 aa20.51■□□□□ 0.87
MECP2-218ENST00000629277 NCAPGQ9BPX3 1015 aa20.51■□□□□ 0.87
MECP2-218ENST00000629277 JPH2Q9BR39 696 aaPredicted RBP20.51■□□□□ 0.87
MECP2-218ENST00000629277 CELF4Q9BZC1 486 aaKnown RBP20.51■□□□□ 0.87
MECP2-218ENST00000629277 BCAS3Q9H6U6 928 aa20.51■□□□□ 0.87
MECP2-218ENST00000629277 FBXL5Q9UKA1 691 aa20.51■□□□□ 0.87
MECP2-218ENST00000629277 DAPK3O43293 454 aa20.51■□□□□ 0.87
MECP2-218ENST00000629277 PLA2G4BP0C869 781 aa20.51■□□□□ 0.87
MECP2-218ENST00000629277 USP11P51784 963 aa20.51■□□□□ 0.87
MECP2-218ENST00000629277 GSTO1P78417 241 aa20.51■□□□□ 0.87
MECP2-218ENST00000629277 ORC2Q13416 577 aaPredicted RBP20.51■□□□□ 0.87
MECP2-218ENST00000629277 CCDC13Q8IYE1 715 aa20.51■□□□□ 0.87
MECP2-218ENST00000629277 LRRC57Q8N9N7 239 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms