RNA–Protein interactions for RNA: ENST00000629104.1

CHD2-216, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-216ENST00000629104 UIMC1Q96RL1 719 aa10.06□□□□□ -0.8
CHD2-216ENST00000629104 PDLIM7Q9NR12 457 aa10.06□□□□□ -0.8
CHD2-216ENST00000629104 TBC1D22BQ9NU19 505 aa10.06□□□□□ -0.8
CHD2-216ENST00000629104 DDX25Q9UHL0 483 aaKnown RBP10.06□□□□□ -0.8
CHD2-216ENST00000629104 ZMYND8Q9ULU4 1186 aaPredicted RBP10.06□□□□□ -0.8
CHD2-216ENST00000629104 SMC3Q9UQE7 1217 aa10.06□□□□□ -0.8
CHD2-216ENST00000629104 MYH9P35579 1960 aaKnown RBP10.06□□□□□ -0.8
CHD2-216ENST00000629104 TRIP12Q14669 1992 aaPredicted RBP10.06□□□□□ -0.8
CHD2-216ENST00000629104 KAT6AQ92794 2004 aa10.06□□□□□ -0.8
CHD2-216ENST00000629104 H3BRB1 525 aa10.05□□□□□ -0.8
CHD2-216ENST00000629104 DDX39AO00148 427 aaKnown RBP10.05□□□□□ -0.8
CHD2-216ENST00000629104 TLR3O15455 904 aaKnown RBP10.05□□□□□ -0.8
CHD2-216ENST00000629104 SLC37A4O43826 429 aa10.05□□□□□ -0.8
CHD2-216ENST00000629104 B4GALT4O60513 344 aa10.05□□□□□ -0.8
CHD2-216ENST00000629104 CCNT1O60563 726 aaKnown RBP10.05□□□□□ -0.8
CHD2-216ENST00000629104 CCNE2O96020 404 aa10.05□□□□□ -0.8
CHD2-216ENST00000629104 GCFC2P16383 781 aaKnown RBP10.05□□□□□ -0.8
CHD2-216ENST00000629104 CHMP4BP1P59074 171 aa10.05□□□□□ -0.8
CHD2-216ENST00000629104 ACTR2P61160 394 aa10.05□□□□□ -0.8
CHD2-216ENST00000629104 PTPN11Q06124 597 aaPredicted RBP10.05□□□□□ -0.8
CHD2-216ENST00000629104 KIAA0753Q2KHM9 967 aa10.05□□□□□ -0.8
CHD2-216ENST00000629104 FAM47CQ5HY64 1035 aa10.05□□□□□ -0.8
CHD2-216ENST00000629104 UTP14CQ5TAP6 766 aaKnown RBP10.05□□□□□ -0.8
CHD2-216ENST00000629104 SH3RF1Q7Z6J0 888 aa10.05□□□□□ -0.8
CHD2-216ENST00000629104 SESTD1Q86VW0 696 aa10.05□□□□□ -0.8
CHD2-216ENST00000629104 TRIM50Q86XT4 487 aa10.05□□□□□ -0.8
CHD2-216ENST00000629104 SLC5A5Q92911 643 aa10.05□□□□□ -0.8
CHD2-216ENST00000629104 NAP1L4Q99733 375 aaKnown RBP10.05□□□□□ -0.8
CHD2-216ENST00000629104 FOXP1Q9H334 677 aaPredicted RBP10.05□□□□□ -0.8
CHD2-216ENST00000629104 TUT1Q9H6E5 874 aaKnown RBP10.05□□□□□ -0.8
CHD2-216ENST00000629104 PRDM5Q9NQX1 630 aaPredicted RBP10.05□□□□□ -0.8
CHD2-216ENST00000629104 PRKAG2Q9UGJ0 569 aa10.05□□□□□ -0.8
CHD2-216ENST00000629104 ZNF215Q9UL58 517 aaPredicted RBP10.05□□□□□ -0.8
CHD2-216ENST00000629104 EMSYQ7Z589 1322 aa10.05□□□□□ -0.8
CHD2-216ENST00000629104 TRIM43BA6NCK2 446 aa10.04□□□□□ -0.8
CHD2-216ENST00000629104 KIF28PB7ZC32 967 aa10.04□□□□□ -0.8
CHD2-216ENST00000629104 KIAA0355O15063 1070 aa10.04□□□□□ -0.8
CHD2-216ENST00000629104 LGR5O75473 907 aa10.04□□□□□ -0.8
CHD2-216ENST00000629104 ATG7O95352 703 aa10.04□□□□□ -0.8
CHD2-216ENST00000629104 KRT76Q01546 638 aa10.04□□□□□ -0.8
CHD2-216ENST00000629104 ZNF746Q6NUN9 644 aaPredicted RBP10.04□□□□□ -0.8
CHD2-216ENST00000629104 CHRDL2Q6WN34 429 aa10.04□□□□□ -0.8
CHD2-216ENST00000629104 C7orf31Q8N865 590 aa10.04□□□□□ -0.8
CHD2-216ENST00000629104 ETNPPLQ8TBG4 499 aa10.04□□□□□ -0.8
CHD2-216ENST00000629104 TRIM43Q96BQ3 446 aaPredicted RBP10.04□□□□□ -0.8
CHD2-216ENST00000629104 INTS4Q96HW7 963 aaKnown RBP10.04□□□□□ -0.8
CHD2-216ENST00000629104 PCYT2Q99447 389 aa10.04□□□□□ -0.8
CHD2-216ENST00000629104 RIT2Q99578 217 aa10.04□□□□□ -0.8
CHD2-216ENST00000629104 TRPV6Q9H1D0 765 aa10.04□□□□□ -0.8
CHD2-216ENST00000629104 TRMT13Q9NUP7 481 aaKnown RBP10.04□□□□□ -0.8
CHD2-216ENST00000629104 TMEM39AQ9NV64 488 aa10.04□□□□□ -0.8
CHD2-216ENST00000629104 PCDH10Q9P2E7 1040 aa10.04□□□□□ -0.8
CHD2-216ENST00000629104 HDAC6Q9UBN7 1215 aa10.04□□□□□ -0.8
CHD2-216ENST00000629104 GTF2IRD1Q9UHL9 959 aa10.04□□□□□ -0.8
CHD2-216ENST00000629104 TBX21Q9UL17 535 aa10.04□□□□□ -0.8
CHD2-216ENST00000629104 TANC1Q9C0D5 1861 aa10.04□□□□□ -0.8
CHD2-216ENST00000629104 IGKV6D-21A0A0A0MT36 114 aa10.03□□□□□ -0.8
CHD2-216ENST00000629104 WNT7AO00755 349 aa10.03□□□□□ -0.8
CHD2-216ENST00000629104 CEP290O15078 2479 aa10.03□□□□□ -0.8
CHD2-216ENST00000629104 GAS7O60861 476 aa10.03□□□□□ -0.8
CHD2-216ENST00000629104 PSMD10O75832 226 aa10.03□□□□□ -0.8
CHD2-216ENST00000629104 SUPT20HL2P0C7V6 817 aa10.03□□□□□ -0.8
CHD2-216ENST00000629104 ITGB8P26012 769 aa10.03□□□□□ -0.8
CHD2-216ENST00000629104 U2AF2P26368 475 aaKnown RBP eCLIP10.03□□□□□ -0.89e-11■■■□□ 16.2
CHD2-216ENST00000629104 GNL2Q13823 731 aaKnown RBP10.03□□□□□ -0.8
CHD2-216ENST00000629104 LRCH2Q5VUJ6 765 aa10.03□□□□□ -0.8
CHD2-216ENST00000629104 GDF6Q6KF10 455 aaPredicted RBP10.03□□□□□ -0.8
CHD2-216ENST00000629104 MIS18BP1Q6P0N0 1132 aa10.03□□□□□ -0.8
CHD2-216ENST00000629104 ABHD15Q6UXT9 468 aa10.03□□□□□ -0.8
CHD2-216ENST00000629104 NOSTRINQ8IVI9 506 aa10.03□□□□□ -0.8
CHD2-216ENST00000629104 HSCBQ8IWL3 235 aa10.03□□□□□ -0.8
CHD2-216ENST00000629104 SMAP1Q8IYB5 467 aaPredicted RBP10.03□□□□□ -0.8
CHD2-216ENST00000629104 GLG1Q92896 1179 aa10.03□□□□□ -0.8
CHD2-216ENST00000629104 GJA10Q969M2 543 aa10.03□□□□□ -0.8
CHD2-216ENST00000629104 TEKT3Q9BXF9 490 aa10.03□□□□□ -0.8
CHD2-216ENST00000629104 SMARCAD1Q9H4L7 1026 aa10.03□□□□□ -0.8
CHD2-216ENST00000629104 KCNMB3Q9NPA1 279 aa10.03□□□□□ -0.8
CHD2-216ENST00000629104 ERAP1Q9NZ08 941 aa10.03□□□□□ -0.8
CHD2-216ENST00000629104 TCEAL9Q9UHQ7 104 aa10.03□□□□□ -0.8
CHD2-216ENST00000629104 WDR64B1ANS9 1081 aa10.02□□□□□ -0.81
CHD2-216ENST00000629104 H3BQV1 296 aa10.02□□□□□ -0.81
CHD2-216ENST00000629104 TBX3O15119 743 aa10.02□□□□□ -0.81
CHD2-216ENST00000629104 SMIM10L2AP0DMW4 78 aa10.02□□□□□ -0.81
CHD2-216ENST00000629104 SMIM10L2BP0DMW5 78 aa10.02□□□□□ -0.81
CHD2-216ENST00000629104 RAG1P15918 1043 aa10.02□□□□□ -0.81
CHD2-216ENST00000629104 MARK3P27448 753 aa10.02□□□□□ -0.81
CHD2-216ENST00000629104 HOXC8P31273 242 aa10.02□□□□□ -0.81
CHD2-216ENST00000629104 MAGEA10P43363 369 aaPredicted RBP10.02□□□□□ -0.81
CHD2-216ENST00000629104 STAT5BP51692 787 aa10.02□□□□□ -0.81
CHD2-216ENST00000629104 HIC1Q14526 733 aa10.02□□□□□ -0.81
CHD2-216ENST00000629104 PTGISQ16647 500 aa10.02□□□□□ -0.81
CHD2-216ENST00000629104 LARP1BQ659C4 914 aaKnown RBP10.02□□□□□ -0.81
CHD2-216ENST00000629104 B3GNT9Q6UX72 402 aa10.02□□□□□ -0.81
CHD2-216ENST00000629104 PLPPR4Q7Z2D5 763 aa10.02□□□□□ -0.81
CHD2-216ENST00000629104 CCDC60Q8IWA6 550 aaPredicted RBP10.02□□□□□ -0.81
CHD2-216ENST00000629104 AFAP1L1Q8TED9 768 aa10.02□□□□□ -0.81
CHD2-216ENST00000629104 HAS1Q92839 578 aa10.02□□□□□ -0.81
CHD2-216ENST00000629104 FAM20AQ96MK3 541 aa10.02□□□□□ -0.81
CHD2-216ENST00000629104 CTAGE1Q96RT6 745 aa10.02□□□□□ -0.81
CHD2-216ENST00000629104 GDF15Q99988 308 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms