RNA–Protein interactions for RNA: ENST00000629047.1

SPTAN1-216, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-216ENST00000629047 BRD3Q15059 726 aa2.35□□□□□ -2.03
SPTAN1-216ENST00000629047 ELF2Q15723 593 aa2.35□□□□□ -2.03
SPTAN1-216ENST00000629047 ENOX2Q16206 610 aaKnown RBP2.35□□□□□ -2.03
SPTAN1-216ENST00000629047 KRTAP15-1Q3LI76 137 aa2.35□□□□□ -2.03
SPTAN1-216ENST00000629047 LRRC23Q53EV4 343 aaPredicted RBP2.35□□□□□ -2.03
SPTAN1-216ENST00000629047 BMP2KLQ5H9B9 411 aa2.35□□□□□ -2.03
SPTAN1-216ENST00000629047 SH2D4BQ5SQS7 431 aa2.35□□□□□ -2.03
SPTAN1-216ENST00000629047 C20orf194Q5TEA3 1177 aa2.35□□□□□ -2.03
SPTAN1-216ENST00000629047 WDR78Q5VTH9 848 aa2.35□□□□□ -2.03
SPTAN1-216ENST00000629047 ZC3H14Q6PJT7 736 aaKnown RBP2.35□□□□□ -2.03
SPTAN1-216ENST00000629047 RNF111Q6ZNA4 994 aa2.35□□□□□ -2.03
SPTAN1-216ENST00000629047 EP400NLQ6ZTU2 488 aa2.35□□□□□ -2.03
SPTAN1-216ENST00000629047 ANKRD23Q86SG2 305 aa2.35□□□□□ -2.03
SPTAN1-216ENST00000629047 SDCCAG8Q86SQ7 713 aaPredicted RBP2.35□□□□□ -2.03
SPTAN1-216ENST00000629047 TAX1BP1Q86VP1 789 aa2.35□□□□□ -2.03
SPTAN1-216ENST00000629047 MCATQ8IVS2 390 aaKnown RBP2.35□□□□□ -2.03
SPTAN1-216ENST00000629047 FAM114A1Q8IWE2 563 aa2.35□□□□□ -2.03
SPTAN1-216ENST00000629047 NLGN1Q8N2Q7 840 aa2.35□□□□□ -2.03
SPTAN1-216ENST00000629047 CCDC150Q8NCX0 1101 aa2.35□□□□□ -2.03
SPTAN1-216ENST00000629047 WDR66Q8TBY9 1149 aa2.35□□□□□ -2.03
SPTAN1-216ENST00000629047 BICD2Q8TD16 824 aa2.35□□□□□ -2.03
SPTAN1-216ENST00000629047 ADAMTS17Q8TE56 1095 aa2.35□□□□□ -2.03
SPTAN1-216ENST00000629047 GOLGA1Q92805 767 aa2.35□□□□□ -2.03
SPTAN1-216ENST00000629047 SMARCC1Q92922 1105 aaPredicted RBP2.35□□□□□ -2.03
SPTAN1-216ENST00000629047 SAAL1Q96ER3 474 aa2.35□□□□□ -2.03
SPTAN1-216ENST00000629047 CFAP53Q96M91 514 aa2.35□□□□□ -2.03
SPTAN1-216ENST00000629047 JMJD8Q96S16 334 aa2.35□□□□□ -2.03
SPTAN1-216ENST00000629047 RUFY1Q96T51 708 aa2.35□□□□□ -2.03
SPTAN1-216ENST00000629047 KIF2CQ99661 725 aa2.35□□□□□ -2.03
SPTAN1-216ENST00000629047 OSBPL7Q9BZF2 842 aa2.35□□□□□ -2.03
SPTAN1-216ENST00000629047 PRDM16Q9HAZ2 1276 aa2.35□□□□□ -2.03
SPTAN1-216ENST00000629047 A1CFQ9NQ94 594 aaKnown RBP2.35□□□□□ -2.03
SPTAN1-216ENST00000629047 STK26Q9P289 416 aa2.35□□□□□ -2.03
SPTAN1-216ENST00000629047 ODF2LQ9ULJ1 636 aa2.35□□□□□ -2.03
SPTAN1-216ENST00000629047 CUX1P39880 1505 aa2.35□□□□□ -2.03
SPTAN1-216ENST00000629047 EIF4G1Q04637 1599 aaKnown RBP2.35□□□□□ -2.03
SPTAN1-216ENST00000629047 RAD54L2Q9Y4B4 1467 aa2.34□□□□□ -2.03
SPTAN1-216ENST00000629047 ERC2O15083 957 aa2.34□□□□□ -2.03
SPTAN1-216ENST00000629047 CEP104O60308 925 aa2.34□□□□□ -2.03
SPTAN1-216ENST00000629047 HMMRO75330 724 aa2.34□□□□□ -2.03
SPTAN1-216ENST00000629047 IGHDP01880 384 aa2.34□□□□□ -2.03
SPTAN1-216ENST00000629047 ASGR2P07307 311 aa2.34□□□□□ -2.03
SPTAN1-216ENST00000629047 DBHP09172 617 aa2.34□□□□□ -2.03
SPTAN1-216ENST00000629047 PECAM1P16284 738 aaPredicted RBP2.34□□□□□ -2.03
SPTAN1-216ENST00000629047 YY1P25490 414 aa2.34□□□□□ -2.03
SPTAN1-216ENST00000629047 POLD1P28340 1107 aa2.34□□□□□ -2.03
SPTAN1-216ENST00000629047 MAGEA8P43361 318 aa2.34□□□□□ -2.03
SPTAN1-216ENST00000629047 GYS2P54840 703 aa2.34□□□□□ -2.03
SPTAN1-216ENST00000629047 SLC8A3P57103 927 aa2.34□□□□□ -2.03
SPTAN1-216ENST00000629047 SESN3P58005 492 aa2.34□□□□□ -2.03
SPTAN1-216ENST00000629047 TMF1P82094 1093 aa2.34□□□□□ -2.03
SPTAN1-216ENST00000629047 MVKQ03426 396 aa2.34□□□□□ -2.03
SPTAN1-216ENST00000629047 SLFN5Q08AF3 891 aa2.34□□□□□ -2.03
SPTAN1-216ENST00000629047 PSMD2Q13200 908 aa2.34□□□□□ -2.03
SPTAN1-216ENST00000629047 DYNC1I2Q13409 638 aaKnown RBP2.34□□□□□ -2.03
SPTAN1-216ENST00000629047 SMAD4Q13485 552 aaKnown RBP2.34□□□□□ -2.03
SPTAN1-216ENST00000629047 R3HDM1Q15032 1099 aaKnown RBP2.34□□□□□ -2.03
SPTAN1-216ENST00000629047 MAP3K11Q16584 847 aa2.34□□□□□ -2.03
SPTAN1-216ENST00000629047 CCDC27Q2M243 656 aa2.34□□□□□ -2.03
SPTAN1-216ENST00000629047 CCDC57Q2TAC2 916 aa2.34□□□□□ -2.03
SPTAN1-216ENST00000629047 LRRFIP1Q32MZ4 808 aaKnown RBP2.34□□□□□ -2.03
SPTAN1-216ENST00000629047 CCDC92Q53HC0 331 aaPredicted RBP2.34□□□□□ -2.03
SPTAN1-216ENST00000629047 CEP85LQ5SZL2 805 aa2.34□□□□□ -2.03
SPTAN1-216ENST00000629047 ZKSCAN2Q63HK3 967 aa2.34□□□□□ -2.03
SPTAN1-216ENST00000629047 GALNT18Q6P9A2 607 aa2.34□□□□□ -2.03
SPTAN1-216ENST00000629047 FBXO38Q6PIJ6 1188 aa2.34□□□□□ -2.03
SPTAN1-216ENST00000629047 SKAP1Q86WV1 359 aa2.34□□□□□ -2.03
SPTAN1-216ENST00000629047 IQCA1Q86XH1 822 aa2.34□□□□□ -2.03
SPTAN1-216ENST00000629047 GLYCTKQ8IVS8 523 aa2.34□□□□□ -2.03
SPTAN1-216ENST00000629047 EXOC8Q8IYI6 725 aa2.34□□□□□ -2.03
SPTAN1-216ENST00000629047 CCDC170Q8IYT3 715 aa2.34□□□□□ -2.03
SPTAN1-216ENST00000629047 TMEM52Q8NDY8 209 aa2.34□□□□□ -2.03
SPTAN1-216ENST00000629047 FAM13CQ8NE31 585 aa2.34□□□□□ -2.03
SPTAN1-216ENST00000629047 FAM71BQ8TC56 605 aa2.34□□□□□ -2.03
SPTAN1-216ENST00000629047 LZICQ8WZA0 190 aa2.34□□□□□ -2.03
SPTAN1-216ENST00000629047 MKL1Q969V6 931 aa2.34□□□□□ -2.03
SPTAN1-216ENST00000629047 MIEF2Q96C03 454 aa2.34□□□□□ -2.03
SPTAN1-216ENST00000629047 GCC1Q96CN9 775 aa2.34□□□□□ -2.03
SPTAN1-216ENST00000629047 MRFAP1L1Q96HT8 127 aa2.34□□□□□ -2.03
SPTAN1-216ENST00000629047 CCDC114Q96M63 670 aa2.34□□□□□ -2.03
SPTAN1-216ENST00000629047 WWC2-AS2Q96NR7 200 aa2.34□□□□□ -2.03
SPTAN1-216ENST00000629047 TSPAN18Q96SJ8 248 aa2.34□□□□□ -2.03
SPTAN1-216ENST00000629047 MPHOSPH9Q99550 1183 aa2.34□□□□□ -2.03
SPTAN1-216ENST00000629047 JPH2Q9BR39 696 aaPredicted RBP2.34□□□□□ -2.03
SPTAN1-216ENST00000629047 TCHPQ9BT92 498 aa2.34□□□□□ -2.03
SPTAN1-216ENST00000629047 THUMPD2Q9BTF0 503 aaKnown RBP2.34□□□□□ -2.03
SPTAN1-216ENST00000629047 ZNF341Q9BYN7 854 aa2.34□□□□□ -2.03
SPTAN1-216ENST00000629047 LRRCC1Q9C099 1032 aa2.34□□□□□ -2.03
SPTAN1-216ENST00000629047 CEP44Q9C0F1 390 aa2.34□□□□□ -2.03
SPTAN1-216ENST00000629047 PDRG1Q9NUG6 133 aa2.34□□□□□ -2.03
SPTAN1-216ENST00000629047 ZNHIT6Q9NWK9 470 aaKnown RBP2.34□□□□□ -2.03
SPTAN1-216ENST00000629047 ERVK13-1Q9NX77 482 aa2.34□□□□□ -2.03
SPTAN1-216ENST00000629047 PPP4R1LQ9P1A2 415 aa2.34□□□□□ -2.03
SPTAN1-216ENST00000629047 VPS18Q9P253 973 aa2.34□□□□□ -2.03
SPTAN1-216ENST00000629047 DNAI1Q9UI46 699 aa2.34□□□□□ -2.03
SPTAN1-216ENST00000629047 ITGB1BP2Q9UKP3 347 aa2.34□□□□□ -2.03
SPTAN1-216ENST00000629047 ZNF215Q9UL58 517 aaPredicted RBP2.34□□□□□ -2.03
SPTAN1-216ENST00000629047 SMC3Q9UQE7 1217 aa2.34□□□□□ -2.03
SPTAN1-216ENST00000629047 FRMD4BQ9Y2L6 1034 aa2.34□□□□□ -2.03
SPTAN1-216ENST00000629047 REREQ9P2R6 1566 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms