RNA–Protein interactions for RNA: ENST00000627665.1

SCN8A-210, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-210ENST00000627665 CATSPERZQ9NTU4 200 aa3.56□□□□□ -1.84
SCN8A-210ENST00000627665 B4GALT6Q9UBX8 382 aa3.56□□□□□ -1.84
SCN8A-210ENST00000627665 KCNG1Q9UIX4 513 aa3.56□□□□□ -1.84
SCN8A-210ENST00000627665 PNMA8BQ9ULN7 279 aaPredicted RBP3.56□□□□□ -1.84
SCN8A-210ENST00000627665 GIT1Q9Y2X7 761 aa3.56□□□□□ -1.84
SCN8A-210ENST00000627665 LUC7L2Q9Y383 392 aaKnown RBP3.56□□□□□ -1.84
SCN8A-210ENST00000627665 NUB1Q9Y5A7 615 aa3.56□□□□□ -1.84
SCN8A-210ENST00000627665 NPFFR2Q9Y5X5 522 aa3.56□□□□□ -1.84
SCN8A-210ENST00000627665 CCDC144AA2RUR9 1427 aa3.55□□□□□ -1.84
SCN8A-210ENST00000627665 CHD4Q14839 1912 aa3.55□□□□□ -1.84
SCN8A-210ENST00000627665 PTPDC1A2A3K4 754 aa3.55□□□□□ -1.84
SCN8A-210ENST00000627665 H0Y8X5 98 aa3.55□□□□□ -1.84
SCN8A-210ENST00000627665 H7C1D1 291 aa3.55□□□□□ -1.84
SCN8A-210ENST00000627665 K7ESF4 209 aa3.55□□□□□ -1.84
SCN8A-210ENST00000627665 IGF2BP3O00425 579 aaKnown RBP eCLIP3.55□□□□□ -1.84
SCN8A-210ENST00000627665 ERC2O15083 957 aa3.55□□□□□ -1.84
SCN8A-210ENST00000627665 GLRX3O76003 335 aaKnown RBP3.55□□□□□ -1.84
SCN8A-210ENST00000627665 SPATA31C1P0DKV0 1188 aa3.55□□□□□ -1.84
SCN8A-210ENST00000627665 MYBL2P10244 700 aa3.55□□□□□ -1.84
SCN8A-210ENST00000627665 BMP3P12645 472 aa3.55□□□□□ -1.84
SCN8A-210ENST00000627665 PLS3P13797 630 aa3.55□□□□□ -1.84
SCN8A-210ENST00000627665 GRK2P25098 689 aa3.55□□□□□ -1.84
SCN8A-210ENST00000627665 MAP4P27816 1152 aaKnown RBP3.55□□□□□ -1.84
SCN8A-210ENST00000627665 CYP2C19P33261 490 aa3.55□□□□□ -1.84
SCN8A-210ENST00000627665 BMP8BP34820 402 aa3.55□□□□□ -1.84
SCN8A-210ENST00000627665 PREPP48147 710 aa3.55□□□□□ -1.84
SCN8A-210ENST00000627665 DNM2P50570 870 aa3.55□□□□□ -1.84
SCN8A-210ENST00000627665 PURAQ00577 322 aaKnown RBP3.55□□□□□ -1.84
SCN8A-210ENST00000627665 KLF1Q13351 362 aaPredicted RBP3.55□□□□□ -1.84
SCN8A-210ENST00000627665 GTF2H3Q13889 308 aa3.55□□□□□ -1.84
SCN8A-210ENST00000627665 NFKBIBQ15653 356 aa3.55□□□□□ -1.84
SCN8A-210ENST00000627665 DDB1Q16531 1140 aa3.55□□□□□ -1.84
SCN8A-210ENST00000627665 PRSS53Q2L4Q9 553 aa3.55□□□□□ -1.84
SCN8A-210ENST00000627665 TMEM177Q53S58 311 aa3.55□□□□□ -1.84
SCN8A-210ENST00000627665 HSP90AB4PQ58FF6 505 aa3.55□□□□□ -1.84
SCN8A-210ENST00000627665 GPAT2Q6NUI2 795 aa3.55□□□□□ -1.84
SCN8A-210ENST00000627665 KCNT2Q6UVM3 1135 aa3.55□□□□□ -1.84
SCN8A-210ENST00000627665 PPP1R3FQ6ZSY5 799 aaPredicted RBP3.55□□□□□ -1.84
SCN8A-210ENST00000627665 TSHZ1Q6ZSZ6 1077 aa3.55□□□□□ -1.84
SCN8A-210ENST00000627665 C22orf34Q6ZV56 151 aa3.55□□□□□ -1.84
SCN8A-210ENST00000627665 C16orf59Q7L2K0 433 aa3.55□□□□□ -1.84
SCN8A-210ENST00000627665 KRT28Q7Z3Y7 464 aa3.55□□□□□ -1.84
SCN8A-210ENST00000627665 TMC3Q7Z5M5 1100 aa3.55□□□□□ -1.84
SCN8A-210ENST00000627665 C11orf96Q7Z7L8 435 aa3.55□□□□□ -1.84
SCN8A-210ENST00000627665 C14orf80Q86SX3 495 aa3.55□□□□□ -1.84
SCN8A-210ENST00000627665 RAVER1Q8IY67 606 aaKnown RBP3.55□□□□□ -1.84
SCN8A-210ENST00000627665 MFSD4AQ8N468 514 aa3.55□□□□□ -1.84
SCN8A-210ENST00000627665 MAGEB6Q8N7X4 407 aa3.55□□□□□ -1.84
SCN8A-210ENST00000627665 NAT16Q8N8M0 369 aa3.55□□□□□ -1.84
SCN8A-210ENST00000627665 DTWD2Q8NBA8 298 aa3.55□□□□□ -1.84
SCN8A-210ENST00000627665 KREMEN2Q8NCW0 462 aa3.55□□□□□ -1.84
SCN8A-210ENST00000627665 ZNF526Q8TF50 670 aaPredicted RBP3.55□□□□□ -1.84
SCN8A-210ENST00000627665 LENG1Q96BZ8 264 aaPredicted RBP3.55□□□□□ -1.84
SCN8A-210ENST00000627665 C1orf159Q96HA4 380 aa3.55□□□□□ -1.84
SCN8A-210ENST00000627665 MMP19Q99542 508 aa3.55□□□□□ -1.84
SCN8A-210ENST00000627665 DUSP23Q9BVJ7 150 aa3.55□□□□□ -1.84
SCN8A-210ENST00000627665 PDGFDQ9GZP0 370 aaPredicted RBP3.55□□□□□ -1.84
SCN8A-210ENST00000627665 THG1LQ9NWX6 298 aaKnown RBP3.55□□□□□ -1.84
SCN8A-210ENST00000627665 IP6K2Q9UHH9 426 aa3.55□□□□□ -1.84
SCN8A-210ENST00000627665 NOB1Q9ULX3 412 aaKnown RBP3.55□□□□□ -1.84
SCN8A-210ENST00000627665 NUP188Q5SRE5 1749 aa3.55□□□□□ -1.84
SCN8A-210ENST00000627665 NWD2Q9ULI1 1742 aa3.55□□□□□ -1.84
SCN8A-210ENST00000627665 MYOM1P52179 1685 aa3.55□□□□□ -1.84
SCN8A-210ENST00000627665 RREB1Q92766 1687 aa3.55□□□□□ -1.84
SCN8A-210ENST00000627665 NEXMIFQ5QGS0 1516 aa3.54□□□□□ -1.84
SCN8A-210ENST00000627665 HFM1A2PYH4 1435 aa3.54□□□□□ -1.84
SCN8A-210ENST00000627665 ABCC5O15440 1437 aa3.54□□□□□ -1.84
SCN8A-210ENST00000627665 TNS3Q68CZ2 1445 aa3.54□□□□□ -1.84
SCN8A-210ENST00000627665 ATP10DQ9P241 1426 aa3.54□□□□□ -1.84
SCN8A-210ENST00000627665 ARHGEF10O15013 1369 aa3.54□□□□□ -1.84
SCN8A-210ENST00000627665 MAP3K5Q99683 1374 aa3.54□□□□□ -1.84
SCN8A-210ENST00000627665 ANKRD30AQ9BXX3 1397 aa3.54□□□□□ -1.84
SCN8A-210ENST00000627665 MYO5BQ9ULV0 1848 aa3.54□□□□□ -1.84
SCN8A-210ENST00000627665 SHANK3Q9BYB0 1731 aa3.54□□□□□ -1.84
SCN8A-210ENST00000627665 CCDC66A2RUB6 948 aa3.54□□□□□ -1.84
SCN8A-210ENST00000627665 WDR64B1ANS9 1081 aa3.54□□□□□ -1.84
SCN8A-210ENST00000627665 GABRDO14764 452 aa3.54□□□□□ -1.84
SCN8A-210ENST00000627665 DHX15O43143 795 aaKnown RBP3.54□□□□□ -1.84
SCN8A-210ENST00000627665 HIP1RO75146 1068 aa3.54□□□□□ -1.84
SCN8A-210ENST00000627665 LRRN2O75325 713 aa3.54□□□□□ -1.84
SCN8A-210ENST00000627665 ABLIM3O94929 683 aa3.54□□□□□ -1.84
SCN8A-210ENST00000627665 SOD2P04179 222 aa3.54□□□□□ -1.84
SCN8A-210ENST00000627665 GSTM1P09488 218 aa3.54□□□□□ -1.84
SCN8A-210ENST00000627665 IFIT2P09913 472 aaKnown RBP3.54□□□□□ -1.84
SCN8A-210ENST00000627665 VAV1P15498 845 aa3.54□□□□□ -1.84
SCN8A-210ENST00000627665 LSP1P33241 339 aa3.54□□□□□ -1.84
SCN8A-210ENST00000627665 ADCYAP1R1P41586 468 aa3.54□□□□□ -1.84
SCN8A-210ENST00000627665 RPL11P62913 178 aaKnown RBP3.54□□□□□ -1.84
SCN8A-210ENST00000627665 KRT85P78386 507 aa3.54□□□□□ -1.84
SCN8A-210ENST00000627665 DSG1Q02413 1049 aa3.54□□□□□ -1.84
SCN8A-210ENST00000627665 SPIRE1Q08AE8 756 aa3.54□□□□□ -1.84
SCN8A-210ENST00000627665 LSAMPQ13449 338 aa3.54□□□□□ -1.84
SCN8A-210ENST00000627665 PICALMQ13492 652 aa3.54□□□□□ -1.84
SCN8A-210ENST00000627665 SNW1Q13573 536 aaKnown RBP3.54□□□□□ -1.84
SCN8A-210ENST00000627665 LRRC41Q15345 812 aa3.54□□□□□ -1.84
SCN8A-210ENST00000627665 DUSP27Q5VZP5 1158 aa3.54□□□□□ -1.84
SCN8A-210ENST00000627665 CDPF1Q6NVV7 123 aa3.54□□□□□ -1.84
SCN8A-210ENST00000627665 PGM2L1Q6PCE3 622 aa3.54□□□□□ -1.84
SCN8A-210ENST00000627665 LYPD4Q6UWN0 246 aa3.54□□□□□ -1.84
SCN8A-210ENST00000627665 CYP2R1Q6VVX0 501 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms