RNA–Protein interactions for RNA: ENST00000627282.2

CNOT9-209, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 2 BASIC

Gene CNOT9, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-209ENST00000627282 CDHR1Q96JP9 859 aa21.57■■□□□ 1.04
CNOT9-209ENST00000627282 PPP1R9BQ96SB3 815 aa21.57■■□□□ 1.04
CNOT9-209ENST00000627282 DDX25Q9UHL0 483 aaKnown RBP21.57■■□□□ 1.04
CNOT9-209ENST00000627282 CTAGE5O15320 804 aa21.56■■□□□ 1.04
CNOT9-209ENST00000627282 MAFGO15525 162 aa21.56■■□□□ 1.04
CNOT9-209ENST00000627282 GCFC2P16383 781 aaKnown RBP21.56■■□□□ 1.04
CNOT9-209ENST00000627282 KCNA2P16389 499 aa21.56■■□□□ 1.04
CNOT9-209ENST00000627282 SETQ01105 290 aaPredicted RBP21.56■■□□□ 1.04
CNOT9-209ENST00000627282 RILPL1Q5EBL4 403 aa21.56■■□□□ 1.04
CNOT9-209ENST00000627282 AXDND1Q5T1B0 1012 aaPredicted RBP21.56■■□□□ 1.04
CNOT9-209ENST00000627282 RNF214Q8ND24 703 aa21.56■■□□□ 1.04
CNOT9-209ENST00000627282 UIMC1Q96RL1 719 aa21.56■■□□□ 1.04
CNOT9-209ENST00000627282 SENP6Q9GZR1 1112 aaPredicted RBP21.56■■□□□ 1.04
CNOT9-209ENST00000627282 AGO4Q9HCK5 861 aaKnown RBP21.56■■□□□ 1.04
CNOT9-209ENST00000627282 PKD2L1Q9P0L9 805 aa21.56■■□□□ 1.04
CNOT9-209ENST00000627282 PGK1P00558 417 aa21.55■■□□□ 1.04
CNOT9-209ENST00000627282 MYCNP04198 464 aaPredicted RBP21.55■■□□□ 1.04
CNOT9-209ENST00000627282 TRAPPC10P48553 1259 aa21.55■■□□□ 1.04
CNOT9-209ENST00000627282 IRX5P78411 483 aaPredicted RBP21.55■■□□□ 1.04
CNOT9-209ENST00000627282 TLK2Q86UE8 772 aa21.55■■□□□ 1.04
CNOT9-209ENST00000627282 FMR1NBQ8N0W7 255 aaPredicted RBP21.55■■□□□ 1.04
CNOT9-209ENST00000627282 SENP7Q9BQF6 1050 aa21.55■■□□□ 1.04
CNOT9-209ENST00000627282 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.55■■□□□ 1.04
CNOT9-209ENST00000627282 NKRFO15226 690 aaKnown RBP eCLIP21.55■■□□□ 1.04
CNOT9-209ENST00000627282 MSH4O15457 936 aa21.55■■□□□ 1.04
CNOT9-209ENST00000627282 ARHGAP1Q07960 439 aa21.55■■□□□ 1.04
CNOT9-209ENST00000627282 ITGB3BPQ13352 177 aaPredicted RBP21.55■■□□□ 1.04
CNOT9-209ENST00000627282 TTC38Q5R3I4 469 aa21.55■■□□□ 1.04
CNOT9-209ENST00000627282 RNF180Q86T96 592 aa21.55■■□□□ 1.04
CNOT9-209ENST00000627282 NAP1L4Q99733 375 aaKnown RBP21.55■■□□□ 1.04
CNOT9-209ENST00000627282 NOL7Q9UMY1 257 aaKnown RBP21.55■■□□□ 1.04
CNOT9-209ENST00000627282 DNAH12Q6ZR08 3092 aa21.54■■□□□ 1.04
CNOT9-209ENST00000627282 SYNRGQ9UMZ2 1314 aa21.54■■□□□ 1.04
CNOT9-209ENST00000627282 DYNC1LI2O43237 492 aaPredicted RBP21.54■■□□□ 1.04
CNOT9-209ENST00000627282 SORBS3O60504 671 aa21.54■■□□□ 1.04
CNOT9-209ENST00000627282 KINO60870 393 aaKnown RBP21.54■■□□□ 1.04
CNOT9-209ENST00000627282 ADAMTS4O75173 837 aa21.54■■□□□ 1.04
CNOT9-209ENST00000627282 GGPS1O95749 300 aa21.54■■□□□ 1.04
CNOT9-209ENST00000627282 CMA1P23946 247 aa21.54■■□□□ 1.04
CNOT9-209ENST00000627282 LRRC26Q2I0M4 334 aa21.54■■□□□ 1.04
CNOT9-209ENST00000627282 CELF3Q5SZQ8 465 aaKnown RBP21.54■■□□□ 1.04
CNOT9-209ENST00000627282 POTEDQ86YR6 584 aa21.54■■□□□ 1.04
CNOT9-209ENST00000627282 C7orf61Q8IZ16 206 aa21.54■■□□□ 1.04
CNOT9-209ENST00000627282 ETNPPLQ8TBG4 499 aa21.54■■□□□ 1.04
CNOT9-209ENST00000627282 UPF3AQ9H1J1 476 aaKnown RBP21.54■■□□□ 1.04
CNOT9-209ENST00000627282 Q9Y3F1 56 aa21.54■■□□□ 1.04
CNOT9-209ENST00000627282 DOCK5Q9H7D0 1870 aa21.53■■□□□ 1.04
CNOT9-209ENST00000627282 MYADML2A6NDP7 307 aa21.53■■□□□ 1.04
CNOT9-209ENST00000627282 IPO5O00410 1097 aaKnown RBP21.53■■□□□ 1.04
CNOT9-209ENST00000627282 GH1P01241 217 aa21.53■■□□□ 1.04
CNOT9-209ENST00000627282 MCM7P33993 719 aa21.53■■□□□ 1.04
CNOT9-209ENST00000627282 GJA9P57773 515 aa21.53■■□□□ 1.04
CNOT9-209ENST00000627282 TYRO3Q06418 890 aa21.53■■□□□ 1.04
CNOT9-209ENST00000627282 ZNF174Q15697 407 aa21.53■■□□□ 1.04
CNOT9-209ENST00000627282 CKAP2LQ8IYA6 745 aa21.53■■□□□ 1.04
CNOT9-209ENST00000627282 GJA10Q969M2 543 aa21.53■■□□□ 1.04
CNOT9-209ENST00000627282 ZNF577Q9BSK1 485 aa21.53■■□□□ 1.04
CNOT9-209ENST00000627282 KCNMB3Q9NPA1 279 aa21.53■■□□□ 1.04
CNOT9-209ENST00000627282 PHF24Q9UPV7 400 aa21.53■■□□□ 1.04
CNOT9-209ENST00000627282 PCDHB6Q9Y5E3 794 aa21.53■■□□□ 1.04
CNOT9-209ENST00000627282 DHX15O43143 795 aaKnown RBP21.52■■□□□ 1.04
CNOT9-209ENST00000627282 NEDD9Q14511 834 aa21.52■■□□□ 1.04
CNOT9-209ENST00000627282 CYFIP1Q7L576 1253 aa21.52■■□□□ 1.04
CNOT9-209ENST00000627282 OR6J1Q8NGC5 347 aa21.52■■□□□ 1.04
CNOT9-209ENST00000627282 EMID1Q96A84 441 aaPredicted RBP21.52■■□□□ 1.04
CNOT9-209ENST00000627282 TELO2Q9Y4R8 837 aa21.52■■□□□ 1.04
CNOT9-209ENST00000627282 A0A1B0GVL5 298 aa21.51■■□□□ 1.03
CNOT9-209ENST00000627282 CUTAO60888 179 aa21.51■■□□□ 1.03
CNOT9-209ENST00000627282 MARCKSP29966 332 aaPredicted RBP21.51■■□□□ 1.03
CNOT9-209ENST00000627282 NDUFA8P51970 172 aa21.51■■□□□ 1.03
CNOT9-209ENST00000627282 NKX3-2P78367 333 aa21.51■■□□□ 1.03
CNOT9-209ENST00000627282 METTL7BQ6UX53 244 aa21.51■■□□□ 1.03
CNOT9-209ENST00000627282 DHX37Q8IY37 1157 aaKnown RBP21.51■■□□□ 1.03
CNOT9-209ENST00000627282 HAS1Q92839 578 aa21.51■■□□□ 1.03
CNOT9-209ENST00000627282 SLC5A5Q92911 643 aa21.51■■□□□ 1.03
CNOT9-209ENST00000627282 TMEM60Q9H2L4 133 aa21.51■■□□□ 1.03
CNOT9-209ENST00000627282 MORC2Q9Y6X9 1032 aaPredicted RBP21.51■■□□□ 1.03
CNOT9-209ENST00000627282 NFASCO94856 1347 aa21.51■■□□□ 1.03
CNOT9-209ENST00000627282 FAM237AA0A1B0GTK4 181 aa21.51■■□□□ 1.03
CNOT9-209ENST00000627282 NEMFO60524 1076 aa21.51■■□□□ 1.03
CNOT9-209ENST00000627282 ATN1P54259 1190 aaPredicted RBP21.51■■□□□ 1.03
CNOT9-209ENST00000627282 LAMC2Q13753 1193 aa21.51■■□□□ 1.03
CNOT9-209ENST00000627282 HSDL1Q3SXM5 330 aa21.51■■□□□ 1.03
CNOT9-209ENST00000627282 KLHDC9Q8NEP7 349 aa21.51■■□□□ 1.03
CNOT9-209ENST00000627282 AP5M1Q9H0R1 490 aa21.51■■□□□ 1.03
CNOT9-209ENST00000627282 RANBP2P49792 3224 aaKnown RBP21.51■■□□□ 1.03
CNOT9-209ENST00000627282 C6orf222P0C671 652 aaPredicted RBP21.5■■□□□ 1.03
CNOT9-209ENST00000627282 CST5P28325 142 aaPredicted RBP21.5■■□□□ 1.03
CNOT9-209ENST00000627282 BEX3Q00994 111 aa21.5■■□□□ 1.03
CNOT9-209ENST00000627282 ORC2Q13416 577 aaPredicted RBP21.5■■□□□ 1.03
CNOT9-209ENST00000627282 SASS6Q6UVJ0 657 aa21.5■■□□□ 1.03
CNOT9-209ENST00000627282 GIMAP8Q8ND71 665 aaPredicted RBP21.5■■□□□ 1.03
CNOT9-209ENST00000627282 AFG1LQ8WV93 481 aa21.5■■□□□ 1.03
CNOT9-209ENST00000627282 FERMT2Q96AC1 680 aa21.5■■□□□ 1.03
CNOT9-209ENST00000627282 PDLIM2Q96JY6 352 aa21.5■■□□□ 1.03
CNOT9-209ENST00000627282 TSEN34Q9BSV6 310 aaKnown RBP21.5■■□□□ 1.03
CNOT9-209ENST00000627282 MLXIPQ9HAP2 919 aa21.5■■□□□ 1.03
CNOT9-209ENST00000627282 CEP131Q9UPN4 1083 aa21.5■■□□□ 1.03
CNOT9-209ENST00000627282 FSCN1Q16658 493 aaKnown RBP21.49■■□□□ 1.03
CNOT9-209ENST00000627282 CCSAPQ6IQ19 270 aaPredicted RBP21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms