RNA–Protein interactions for RNA: ENST00000627000.1

CHRNA4-209, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 2,192 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-209ENST00000627000 RUSC1Q9BVN2 902 aa21.8■■□□□ 1.08
CHRNA4-209ENST00000627000 UNC45AQ9H3U1 944 aa21.8■■□□□ 1.08
CHRNA4-209ENST00000627000 RPTORQ8N122 1335 aa21.8■■□□□ 1.08
CHRNA4-209ENST00000627000 ZBTB39O15060 712 aa21.8■■□□□ 1.08
CHRNA4-209ENST00000627000 HOXA7P31268 230 aaPredicted RBP21.8■■□□□ 1.08
CHRNA4-209ENST00000627000 TPH2Q8IWU9 490 aa21.8■■□□□ 1.08
CHRNA4-209ENST00000627000 TSG101Q99816 390 aa21.8■■□□□ 1.08
CHRNA4-209ENST00000627000 DNAI1Q9UI46 699 aa21.8■■□□□ 1.08
CHRNA4-209ENST00000627000 RABGAP1Q9Y3P9 1069 aa21.8■■□□□ 1.08
CHRNA4-209ENST00000627000 ADGRG1Q9Y653 693 aa21.8■■□□□ 1.08
CHRNA4-209ENST00000627000 POLR2AP24928 1970 aaKnown RBP21.79■■□□□ 1.08
CHRNA4-209ENST00000627000 RSPH10B2B2RC85 870 aa21.79■■□□□ 1.08
CHRNA4-209ENST00000627000 RSPH10BP0C881 870 aa21.79■■□□□ 1.08
CHRNA4-209ENST00000627000 CASP5P51878 434 aa21.79■■□□□ 1.08
CHRNA4-209ENST00000627000 USP14P54578 494 aa21.79■■□□□ 1.08
CHRNA4-209ENST00000627000 ATG4CQ96DT6 458 aa21.79■■□□□ 1.08
CHRNA4-209ENST00000627000 PKD2L1Q9P0L9 805 aa21.79■■□□□ 1.08
CHRNA4-209ENST00000627000 DICER1Q9UPY3 1922 aaKnown RBP21.79■■□□□ 1.08
CHRNA4-209ENST00000627000 CTIFO43310 598 aaKnown RBP21.78■■□□□ 1.08
CHRNA4-209ENST00000627000 EYA4O95677 639 aa21.78■■□□□ 1.08
CHRNA4-209ENST00000627000 ZNF280CQ8ND82 737 aa21.78■■□□□ 1.08
CHRNA4-209ENST00000627000 SYTL5Q8TDW5 730 aaPredicted RBP21.78■■□□□ 1.08
CHRNA4-209ENST00000627000 PICK1Q9NRD5 415 aa21.78■■□□□ 1.08
CHRNA4-209ENST00000627000 ZHX2Q9Y6X8 837 aa21.78■■□□□ 1.08
CHRNA4-209ENST00000627000 DDX39AO00148 427 aaKnown RBP21.78■■□□□ 1.08
CHRNA4-209ENST00000627000 SETQ01105 290 aaPredicted RBP21.78■■□□□ 1.08
CHRNA4-209ENST00000627000 VWA3BQ502W6 1294 aa21.78■■□□□ 1.08
CHRNA4-209ENST00000627000 SFR1Q86XK3 245 aa21.78■■□□□ 1.08
CHRNA4-209ENST00000627000 MCF2L2Q86YR7 1114 aa21.78■■□□□ 1.08
CHRNA4-209ENST00000627000 CHP1Q99653 195 aa21.78■■□□□ 1.08
CHRNA4-209ENST00000627000 WDR11Q9BZH6 1224 aa21.78■■□□□ 1.08
CHRNA4-209ENST00000627000 TTYH3Q9C0H2 523 aa21.78■■□□□ 1.08
CHRNA4-209ENST00000627000 TUFT1Q9NNX1 390 aa21.78■■□□□ 1.08
CHRNA4-209ENST00000627000 AGPAT5Q9NUQ2 364 aa21.78■■□□□ 1.08
CHRNA4-209ENST00000627000 WRAP73Q9P2S5 460 aaPredicted RBP21.78■■□□□ 1.08
CHRNA4-209ENST00000627000 CAPN11Q9UMQ6 739 aa21.78■■□□□ 1.08
CHRNA4-209ENST00000627000 SSC5DA1L4H1 1573 aa21.78■■□□□ 1.08
CHRNA4-209ENST00000627000 PHIPQ8WWQ0 1821 aa21.78■■□□□ 1.08
CHRNA4-209ENST00000627000 IPO5O00410 1097 aaKnown RBP21.77■■□□□ 1.08
CHRNA4-209ENST00000627000 TRAF5O00463 557 aa21.77■■□□□ 1.08
CHRNA4-209ENST00000627000 FGFR1OPO95684 399 aaKnown RBP21.77■■□□□ 1.08
CHRNA4-209ENST00000627000 CCDC175P0C221 793 aa21.77■■□□□ 1.08
CHRNA4-209ENST00000627000 LMNB1P20700 586 aa21.77■■□□□ 1.08
CHRNA4-209ENST00000627000 HMGCS2P54868 508 aa21.77■■□□□ 1.08
CHRNA4-209ENST00000627000 TMTC1Q8IUR5 882 aa21.77■■□□□ 1.08
CHRNA4-209ENST00000627000 GPC2Q8N158 579 aa21.77■■□□□ 1.08
CHRNA4-209ENST00000627000 TAAR1Q96RJ0 339 aa21.77■■□□□ 1.08
CHRNA4-209ENST00000627000 KCTD10Q9H3F6 313 aa21.77■■□□□ 1.08
CHRNA4-209ENST00000627000 LUC7L2Q9Y383 392 aaKnown RBP21.77■■□□□ 1.08
CHRNA4-209ENST00000627000 COL11A1P12107 1806 aaPredicted RBP21.77■■□□□ 1.08
CHRNA4-209ENST00000627000 RLFQ13129 1914 aa21.77■■□□□ 1.07
CHRNA4-209ENST00000627000 VWA5AO00534 786 aa21.77■■□□□ 1.07
CHRNA4-209ENST00000627000 RPS6P62753 249 aaKnown RBP21.77■■□□□ 1.07
CHRNA4-209ENST00000627000 GHRHRQ02643 423 aa21.77■■□□□ 1.07
CHRNA4-209ENST00000627000 PRKG1Q13976 671 aa21.77■■□□□ 1.07
CHRNA4-209ENST00000627000 FOXR2Q6PJQ5 311 aa21.77■■□□□ 1.07
CHRNA4-209ENST00000627000 B3GNT9Q6UX72 402 aa21.77■■□□□ 1.07
CHRNA4-209ENST00000627000 DLK2Q6UY11 383 aa21.77■■□□□ 1.07
CHRNA4-209ENST00000627000 ACRBPQ8NEB7 543 aa21.77■■□□□ 1.07
CHRNA4-209ENST00000627000 PCMTD1Q96MG8 357 aaPredicted RBP21.77■■□□□ 1.07
CHRNA4-209ENST00000627000 PURBQ96QR8 312 aaKnown RBP21.77■■□□□ 1.07
CHRNA4-209ENST00000627000 TEKT3Q9BXF9 490 aa21.77■■□□□ 1.07
CHRNA4-209ENST00000627000 NDST4Q9H3R1 872 aa21.77■■□□□ 1.07
CHRNA4-209ENST00000627000 AS3MTQ9HBK9 375 aa21.77■■□□□ 1.07
CHRNA4-209ENST00000627000 CTDP1Q9Y5B0 961 aaPredicted RBP21.77■■□□□ 1.07
CHRNA4-209ENST00000627000 ZBED4O75132 1171 aa21.76■■□□□ 1.07
CHRNA4-209ENST00000627000 TRIM21P19474 475 aaKnown RBP21.76■■□□□ 1.07
CHRNA4-209ENST00000627000 MRPS9P82933 396 aaKnown RBP21.76■■□□□ 1.07
CHRNA4-209ENST00000627000 FKBP3Q00688 224 aaKnown RBP21.76■■□□□ 1.07
CHRNA4-209ENST00000627000 MAN2A1Q16706 1144 aa21.76■■□□□ 1.07
CHRNA4-209ENST00000627000 RINT1Q6NUQ1 792 aa21.76■■□□□ 1.07
CHRNA4-209ENST00000627000 CYP26C1Q6V0L0 522 aa21.76■■□□□ 1.07
CHRNA4-209ENST00000627000 OR8K1Q8NGG5 319 aa21.76■■□□□ 1.07
CHRNA4-209ENST00000627000 KLRG1Q96E93 195 aa21.76■■□□□ 1.07
CHRNA4-209ENST00000627000 ERGIC2Q96RQ1 377 aa21.76■■□□□ 1.07
CHRNA4-209ENST00000627000 KCNH7Q9NS40 1196 aa21.76■■□□□ 1.07
CHRNA4-209ENST00000627000 RIPK3Q9Y572 518 aa21.76■■□□□ 1.07
CHRNA4-209ENST00000627000 SBF1O95248 1867 aa21.76■■□□□ 1.07
CHRNA4-209ENST00000627000 GOLGA6L9A6NEM1 432 aa21.75■■□□□ 1.07
CHRNA4-209ENST00000627000 TUBB4AP04350 444 aa21.75■■□□□ 1.07
CHRNA4-209ENST00000627000 NAA30Q147X3 362 aaPredicted RBP21.75■■□□□ 1.07
CHRNA4-209ENST00000627000 FKBP15Q5T1M5 1219 aa21.75■■□□□ 1.07
CHRNA4-209ENST00000627000 ZNF710Q8N1W2 664 aa21.75■■□□□ 1.07
CHRNA4-209ENST00000627000 TRERF1Q96PN7 1200 aa21.75■■□□□ 1.07
CHRNA4-209ENST00000627000 DNAJC7Q99615 494 aa21.75■■□□□ 1.07
CHRNA4-209ENST00000627000 PHLPP2Q6ZVD8 1323 aa21.75■■□□□ 1.07
CHRNA4-209ENST00000627000 SFI1A8K8P3 1242 aa21.75■■□□□ 1.07
CHRNA4-209ENST00000627000 EIF2AK2P19525 551 aaKnown RBP21.75■■□□□ 1.07
CHRNA4-209ENST00000627000 WDR24Q96S15 920 aa21.75■■□□□ 1.07
CHRNA4-209ENST00000627000 LZTFL1Q9NQ48 299 aa21.75■■□□□ 1.07
CHRNA4-209ENST00000627000 MYBP10242 640 aa21.74■■□□□ 1.07
CHRNA4-209ENST00000627000 WDR59Q6PJI9 974 aa21.74■■□□□ 1.07
CHRNA4-209ENST00000627000 MTERF4Q7Z6M4 381 aaKnown RBP21.74■■□□□ 1.07
CHRNA4-209ENST00000627000 IRX2Q9BZI1 471 aaPredicted RBP21.74■■□□□ 1.07
CHRNA4-209ENST00000627000 COL4A3BPQ9Y5P4 624 aa21.74■■□□□ 1.07
CHRNA4-209ENST00000627000 DDNO94850 711 aaPredicted RBP21.74■■□□□ 1.07
CHRNA4-209ENST00000627000 HOXD13P35453 343 aa21.74■■□□□ 1.07
CHRNA4-209ENST00000627000 GNG11P61952 73 aa21.74■■□□□ 1.07
CHRNA4-209ENST00000627000 EPHA7Q15375 998 aa21.74■■□□□ 1.07
CHRNA4-209ENST00000627000 TKFCQ3LXA3 575 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms