RNA–Protein interactions for RNA: ENST00000626847.2

SMN2-214, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN2, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-214ENST00000626847 GABBR1Q9UBS5 961 aa9.23□□□□□ -0.93
SMN2-214ENST00000626847 RTCBQ9Y3I0 505 aaKnown RBP9.23□□□□□ -0.93
SMN2-214ENST00000626847 NFAT5O94916 1531 aa9.23□□□□□ -0.93
SMN2-214ENST00000626847 TAF1LQ8IZX4 1826 aa9.23□□□□□ -0.93
SMN2-214ENST00000626847 ARFGEF1Q9Y6D6 1849 aa9.23□□□□□ -0.93
SMN2-214ENST00000626847 hCG_2014768A0A024R1R8 64 aa9.22□□□□□ -0.93
SMN2-214ENST00000626847 SART1O43290 800 aaKnown RBP9.22□□□□□ -0.93
SMN2-214ENST00000626847 MBD4O95243 580 aa9.22□□□□□ -0.93
SMN2-214ENST00000626847 GNA15P30679 374 aa9.22□□□□□ -0.93
SMN2-214ENST00000626847 GBP2P32456 591 aaPredicted RBP9.22□□□□□ -0.93
SMN2-214ENST00000626847 ARHGAP25P42331 645 aa9.22□□□□□ -0.93
SMN2-214ENST00000626847 MAGEA10P43363 369 aaPredicted RBP9.22□□□□□ -0.93
SMN2-214ENST00000626847 TUBB4BP68371 445 aa9.22□□□□□ -0.93
SMN2-214ENST00000626847 IKQ13123 557 aaPredicted RBP9.22□□□□□ -0.93
SMN2-214ENST00000626847 TUBA3CQ13748 450 aa9.22□□□□□ -0.93
SMN2-214ENST00000626847 ARMC3Q5W041 872 aa9.22□□□□□ -0.93
SMN2-214ENST00000626847 TMC6Q7Z403 805 aa9.22□□□□□ -0.93
SMN2-214ENST00000626847 SLC7A5P1Q8MH63 180 aa9.22□□□□□ -0.93
SMN2-214ENST00000626847 ATRIPQ8WXE1 791 aa9.22□□□□□ -0.93
SMN2-214ENST00000626847 ANKRD27Q96NW4 1050 aa9.22□□□□□ -0.93
SMN2-214ENST00000626847 PARD6BQ9BYG5 372 aa9.22□□□□□ -0.93
SMN2-214ENST00000626847 ZHX3Q9H4I2 956 aa9.22□□□□□ -0.93
SMN2-214ENST00000626847 ST7Q9NRC1 585 aa9.22□□□□□ -0.93
SMN2-214ENST00000626847 DISC1Q9NRI5 854 aa9.22□□□□□ -0.93
SMN2-214ENST00000626847 DMGDHQ9UI17 866 aaKnown RBP9.22□□□□□ -0.93
SMN2-214ENST00000626847 SBF1O95248 1867 aa9.22□□□□□ -0.93
SMN2-214ENST00000626847 UBR3Q6ZT12 1888 aa9.22□□□□□ -0.93
SMN2-214ENST00000626847 A0A1W2PNR3 127 aa9.22□□□□□ -0.93
SMN2-214ENST00000626847 M0R2C6 588 aa9.22□□□□□ -0.93
SMN2-214ENST00000626847 ZEB2O60315 1214 aa9.22□□□□□ -0.93
SMN2-214ENST00000626847 TMCC1O94876 653 aa9.22□□□□□ -0.93
SMN2-214ENST00000626847 FGFR1OPO95684 399 aaKnown RBP9.22□□□□□ -0.93
SMN2-214ENST00000626847 PARP1P09874 1014 aaKnown RBP9.22□□□□□ -0.93
SMN2-214ENST00000626847 FAM160A1Q05DH4 1040 aa9.22□□□□□ -0.93
SMN2-214ENST00000626847 PPIDQ08752 370 aaKnown RBP9.22□□□□□ -0.93
SMN2-214ENST00000626847 DRP2Q13474 957 aa9.22□□□□□ -0.93
SMN2-214ENST00000626847 BTG3Q14201 252 aaPredicted RBP9.22□□□□□ -0.93
SMN2-214ENST00000626847 DHX8Q14562 1220 aaKnown RBP9.22□□□□□ -0.93
SMN2-214ENST00000626847 KCNB1Q14721 858 aa9.22□□□□□ -0.93
SMN2-214ENST00000626847 PGBD3Q8N328 593 aa9.22□□□□□ -0.93
SMN2-214ENST00000626847 RASSF8Q8NHQ8 419 aa9.22□□□□□ -0.93
SMN2-214ENST00000626847 FRMD6Q96NE9 622 aa9.22□□□□□ -0.93
SMN2-214ENST00000626847 TSC22D3Q99576 134 aa9.22□□□□□ -0.93
SMN2-214ENST00000626847 ALDH8A1Q9H2A2 487 aaPredicted RBP9.22□□□□□ -0.93
SMN2-214ENST00000626847 GPAMQ9HCL2 828 aa9.22□□□□□ -0.93
SMN2-214ENST00000626847 TCF7L2Q9NQB0 619 aa9.22□□□□□ -0.93
SMN2-214ENST00000626847 CEP131Q9UPN4 1083 aa9.22□□□□□ -0.93
SMN2-214ENST00000626847 SPG7Q9UQ90 795 aa9.22□□□□□ -0.93
SMN2-214ENST00000626847 NOSIPQ9Y314 301 aaKnown RBP9.22□□□□□ -0.93
SMN2-214ENST00000626847 C4BP0C0L5 1744 aa9.21□□□□□ -0.93
SMN2-214ENST00000626847 EBAG9O00559 213 aa9.21□□□□□ -0.94
SMN2-214ENST00000626847 DIAPH1O60610 1272 aaKnown RBP9.21□□□□□ -0.94
SMN2-214ENST00000626847 LUC7L3O95232 432 aaKnown RBP9.21□□□□□ -0.94
SMN2-214ENST00000626847 ALOX15P16050 662 aaPredicted RBP9.21□□□□□ -0.94
SMN2-214ENST00000626847 HMGB2P26583 209 aaKnown RBP9.21□□□□□ -0.94
SMN2-214ENST00000626847 NLRP5P59047 1200 aa9.21□□□□□ -0.94
SMN2-214ENST00000626847 SEPT2Q15019 361 aa9.21□□□□□ -0.94
SMN2-214ENST00000626847 RASA2Q15283 850 aa9.21□□□□□ -0.94
SMN2-214ENST00000626847 DUSP27Q5VZP5 1158 aa9.21□□□□□ -0.94
SMN2-214ENST00000626847 ADALQ6DHV7 355 aa9.21□□□□□ -0.94
SMN2-214ENST00000626847 MIS18BP1Q6P0N0 1132 aa9.21□□□□□ -0.94
SMN2-214ENST00000626847 CCBE1Q6UXH8 406 aaPredicted RBP9.21□□□□□ -0.94
SMN2-214ENST00000626847 LURAP1LQ8IV03 231 aa9.21□□□□□ -0.94
SMN2-214ENST00000626847 LRRC43Q8N309 656 aa9.21□□□□□ -0.94
SMN2-214ENST00000626847 KIAA1958Q8N8K9 716 aa9.21□□□□□ -0.94
SMN2-214ENST00000626847 CCDC110Q8TBZ0 833 aa9.21□□□□□ -0.94
SMN2-214ENST00000626847 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.21□□□□□ -0.94
SMN2-214ENST00000626847 APPBP2Q92624 585 aa9.21□□□□□ -0.94
SMN2-214ENST00000626847 RUNDC1Q96C34 613 aa9.21□□□□□ -0.94
SMN2-214ENST00000626847 RPS6KC1Q96S38 1066 aa9.21□□□□□ -0.94
SMN2-214ENST00000626847 CRBNQ96SW2 442 aa9.21□□□□□ -0.94
SMN2-214ENST00000626847 CGREF1Q99674 301 aa9.21□□□□□ -0.94
SMN2-214ENST00000626847 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.21□□□□□ -0.94
SMN2-214ENST00000626847 UPF3BQ9BZI7 483 aaKnown RBP9.21□□□□□ -0.94
SMN2-214ENST00000626847 HELLSQ9NRZ9 838 aa9.21□□□□□ -0.94
SMN2-214ENST00000626847 LMBRD1Q9NUN5 540 aa9.21□□□□□ -0.94
SMN2-214ENST00000626847 ATXN10Q9UBB4 475 aa9.21□□□□□ -0.94
SMN2-214ENST00000626847 KLF15Q9UIH9 416 aa9.21□□□□□ -0.94
SMN2-214ENST00000626847 SPO11Q9Y5K1 396 aa9.21□□□□□ -0.94
SMN2-214ENST00000626847 KDM6AO15550 1401 aaPredicted RBP9.2□□□□□ -0.94
SMN2-214ENST00000626847 NSD3Q9BZ95 1437 aa9.2□□□□□ -0.94
SMN2-214ENST00000626847 H0YC42 278 aa9.2□□□□□ -0.94
SMN2-214ENST00000626847 BIRC5O15392 142 aa9.2□□□□□ -0.94
SMN2-214ENST00000626847 TNFRSF21O75509 655 aa9.2□□□□□ -0.94
SMN2-214ENST00000626847 CAVIN2O95810 425 aa9.2□□□□□ -0.94
SMN2-214ENST00000626847 LDHCP07864 332 aa9.2□□□□□ -0.94
SMN2-214ENST00000626847 COL6A1P12109 1028 aa9.2□□□□□ -0.94
SMN2-214ENST00000626847 BMP1P13497 986 aa9.2□□□□□ -0.94
SMN2-214ENST00000626847 PSMA3P25788 255 aa9.2□□□□□ -0.94
SMN2-214ENST00000626847 CNGA1P29973 690 aa9.2□□□□□ -0.94
SMN2-214ENST00000626847 TPD52P55327 224 aaPredicted RBP9.2□□□□□ -0.94
SMN2-214ENST00000626847 LMNB2Q03252 620 aa9.2□□□□□ -0.94
SMN2-214ENST00000626847 POU5F1BQ06416 359 aa9.2□□□□□ -0.94
SMN2-214ENST00000626847 ALDH1L2Q3SY69 923 aa9.2□□□□□ -0.94
SMN2-214ENST00000626847 CEP85LQ5SZL2 805 aa9.2□□□□□ -0.94
SMN2-214ENST00000626847 CCSAPQ6IQ19 270 aaPredicted RBP9.2□□□□□ -0.94
SMN2-214ENST00000626847 PDE12Q6L8Q7 609 aaKnown RBP9.2□□□□□ -0.94
SMN2-214ENST00000626847 B4GALNT4Q76KP1 1039 aa9.2□□□□□ -0.94
SMN2-214ENST00000626847 NANOGNBQ7Z5D8 188 aa9.2□□□□□ -0.94
SMN2-214ENST00000626847 SVIPQ8NHG7 77 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms