RNA–Protein interactions for RNA: ENST00000626315.1

SCARNA15.3-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 122 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15.3-201ENST00000626315 TSC1Q92574 1164 aa3.79□□□□□ -1.8
SCARNA15.3-201ENST00000626315 STAMQ92783 540 aa3.79□□□□□ -1.8
SCARNA15.3-201ENST00000626315 IER2Q9BTL4 223 aa3.79□□□□□ -1.8
SCARNA15.3-201ENST00000626315 TANGO6Q9C0B7 1094 aa3.79□□□□□ -1.8
SCARNA15.3-201ENST00000626315 OCEL1Q9H607 264 aa3.79□□□□□ -1.8
SCARNA15.3-201ENST00000626315 ENTPD7Q9NQZ7 604 aa3.79□□□□□ -1.8
SCARNA15.3-201ENST00000626315 AAASQ9NRG9 546 aa3.79□□□□□ -1.8
SCARNA15.3-201ENST00000626315 SEPT9Q9UHD8 586 aaPredicted RBP3.79□□□□□ -1.8
SCARNA15.3-201ENST00000626315 PUF60Q9UHX1 559 aaKnown RBP3.79□□□□□ -1.8
SCARNA15.3-201ENST00000626315 PRR12Q9ULL5 1215 aa3.79□□□□□ -1.8
SCARNA15.3-201ENST00000626315 GNEQ9Y223 722 aaKnown RBP3.79□□□□□ -1.8
SCARNA15.3-201ENST00000626315 PCDHB12Q9Y5F1 795 aa3.79□□□□□ -1.8
SCARNA15.3-201ENST00000626315 AKAP13Q12802 2813 aa3.79□□□□□ -1.8
SCARNA15.3-201ENST00000626315 FREM2Q5SZK8 3169 aa3.78□□□□□ -1.8
SCARNA15.3-201ENST00000626315 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.78□□□□□ -1.8
SCARNA15.3-201ENST00000626315 KPNA6O60684 536 aa3.78□□□□□ -1.8
SCARNA15.3-201ENST00000626315 CCDC192P0DO97 292 aa3.78□□□□□ -1.8
SCARNA15.3-201ENST00000626315 TDGF1P13385 188 aa3.78□□□□□ -1.8
SCARNA15.3-201ENST00000626315 CD72P21854 359 aa3.78□□□□□ -1.8
SCARNA15.3-201ENST00000626315 CPT1AP50416 773 aa3.78□□□□□ -1.8
SCARNA15.3-201ENST00000626315 PURAQ00577 322 aaKnown RBP3.78□□□□□ -1.8
SCARNA15.3-201ENST00000626315 PFKPQ01813 784 aa3.78□□□□□ -1.8
SCARNA15.3-201ENST00000626315 CREB5Q02930 508 aa3.78□□□□□ -1.8
SCARNA15.3-201ENST00000626315 PDAP1Q13442 181 aaKnown RBP3.78□□□□□ -1.8
SCARNA15.3-201ENST00000626315 KCNC3Q14003 757 aa3.78□□□□□ -1.8
SCARNA15.3-201ENST00000626315 BMS1Q14692 1282 aaKnown RBP3.78□□□□□ -1.8
SCARNA15.3-201ENST00000626315 NOLC1Q14978 699 aaKnown RBP eCLIP3.78□□□□□ -1.8
SCARNA15.3-201ENST00000626315 DCAF6Q58WW2 860 aa3.78□□□□□ -1.8
SCARNA15.3-201ENST00000626315 TAF7LQ5H9L4 462 aa3.78□□□□□ -1.8
SCARNA15.3-201ENST00000626315 LCE2DQ5TA82 110 aaPredicted RBP3.78□□□□□ -1.8
SCARNA15.3-201ENST00000626315 PLPP4Q5VZY2 271 aa3.78□□□□□ -1.8
SCARNA15.3-201ENST00000626315 ZNF852Q6ZMS4 543 aa3.78□□□□□ -1.8
SCARNA15.3-201ENST00000626315 ARMCX2Q7L311 632 aa3.78□□□□□ -1.8
SCARNA15.3-201ENST00000626315 HDDC3Q8N4P3 179 aa3.78□□□□□ -1.8
SCARNA15.3-201ENST00000626315 C12orf76Q8N812 135 aaPredicted RBP3.78□□□□□ -1.8
SCARNA15.3-201ENST00000626315 TET1Q8NFU7 2136 aa3.78□□□□□ -1.8
SCARNA15.3-201ENST00000626315 SPATA3Q8NHX4 192 aa3.78□□□□□ -1.8
SCARNA15.3-201ENST00000626315 WDR66Q8TBY9 1149 aa3.78□□□□□ -1.8
SCARNA15.3-201ENST00000626315 RNF25Q96BH1 459 aaPredicted RBP3.78□□□□□ -1.8
SCARNA15.3-201ENST00000626315 DDX23Q9BUQ8 820 aaKnown RBP3.78□□□□□ -1.8
SCARNA15.3-201ENST00000626315 USP26Q9BXU7 913 aa3.78□□□□□ -1.8
SCARNA15.3-201ENST00000626315 NGRNQ9NPE2 291 aaKnown RBP3.78□□□□□ -1.8
SCARNA15.3-201ENST00000626315 CNNM1Q9NRU3 951 aa3.78□□□□□ -1.8
SCARNA15.3-201ENST00000626315 DZANK1Q9NVP4 752 aa3.78□□□□□ -1.8
SCARNA15.3-201ENST00000626315 TMEM260Q9NX78 707 aa3.78□□□□□ -1.8
SCARNA15.3-201ENST00000626315 DENND2AQ9ULE3 1009 aa3.78□□□□□ -1.8
SCARNA15.3-201ENST00000626315 ADAMTS8Q9UP79 889 aa3.78□□□□□ -1.8
SCARNA15.3-201ENST00000626315 APOBEC2Q9Y235 224 aaKnown RBP3.78□□□□□ -1.8
SCARNA15.3-201ENST00000626315 KIF20BQ96Q89 1820 aa3.78□□□□□ -1.8
SCARNA15.3-201ENST00000626315 ASTN1O14525 1302 aa3.77□□□□□ -1.81
SCARNA15.3-201ENST00000626315 IL16Q14005 1332 aa3.77□□□□□ -1.81
SCARNA15.3-201ENST00000626315 RALGAPA1Q6GYQ0 2036 aa3.77□□□□□ -1.81
SCARNA15.3-201ENST00000626315 LNP1A1A4G5 178 aa3.77□□□□□ -1.81
SCARNA15.3-201ENST00000626315 RSPH10B2B2RC85 870 aa3.77□□□□□ -1.81
SCARNA15.3-201ENST00000626315 RPP40O75818 363 aaKnown RBP3.77□□□□□ -1.81
SCARNA15.3-201ENST00000626315 LDHBP07195 334 aaKnown RBP3.77□□□□□ -1.81
SCARNA15.3-201ENST00000626315 LINC00271P0C7V0 271 aa3.77□□□□□ -1.81
SCARNA15.3-201ENST00000626315 RSPH10BP0C881 870 aa3.77□□□□□ -1.81
SCARNA15.3-201ENST00000626315 KRT10P13645 584 aa3.77□□□□□ -1.81
SCARNA15.3-201ENST00000626315 DRD2P14416 443 aa3.77□□□□□ -1.81
SCARNA15.3-201ENST00000626315 HOXB4P17483 251 aaPredicted RBP3.77□□□□□ -1.81
SCARNA15.3-201ENST00000626315 TARSP26639 723 aaKnown RBP3.77□□□□□ -1.81
SCARNA15.3-201ENST00000626315 PRKAR2BP31323 418 aa3.77□□□□□ -1.81
SCARNA15.3-201ENST00000626315 CA8P35219 290 aa3.77□□□□□ -1.81
SCARNA15.3-201ENST00000626315 STAT3P40763 770 aa3.77□□□□□ -1.81
SCARNA15.3-201ENST00000626315 RAP1GAPP47736 663 aa3.77□□□□□ -1.81
SCARNA15.3-201ENST00000626315 ALDH7A1P49419 539 aaKnown RBP3.77□□□□□ -1.81
SCARNA15.3-201ENST00000626315 ATXN3P54252 364 aaPredicted RBP3.77□□□□□ -1.81
SCARNA15.3-201ENST00000626315 ERVFC1P60507 584 aa3.77□□□□□ -1.81
SCARNA15.3-201ENST00000626315 GPC5P78333 572 aa3.77□□□□□ -1.81
SCARNA15.3-201ENST00000626315 LMAN2Q12907 356 aa3.77□□□□□ -1.81
SCARNA15.3-201ENST00000626315 LETM2Q2VYF4 491 aa3.77□□□□□ -1.81
SCARNA15.3-201ENST00000626315 PKDCCQ504Y2 493 aa3.77□□□□□ -1.81
SCARNA15.3-201ENST00000626315 ZNF618Q5T7W0 954 aa3.77□□□□□ -1.81
SCARNA15.3-201ENST00000626315 IQSEC1Q6DN90 963 aa3.77□□□□□ -1.81
SCARNA15.3-201ENST00000626315 TMC5Q6UXY8 1006 aa3.77□□□□□ -1.81
SCARNA15.3-201ENST00000626315 TAOK1Q7L7X3 1001 aa3.77□□□□□ -1.81
SCARNA15.3-201ENST00000626315 CABP7Q86V35 215 aa3.77□□□□□ -1.81
SCARNA15.3-201ENST00000626315 THNSL1Q8IYQ7 743 aa3.77□□□□□ -1.81
SCARNA15.3-201ENST00000626315 PDCD7Q8N8D1 485 aaKnown RBP3.77□□□□□ -1.81
SCARNA15.3-201ENST00000626315 CHST13Q8NET6 341 aa3.77□□□□□ -1.81
SCARNA15.3-201ENST00000626315 SPATA20Q8TB22 786 aa3.77□□□□□ -1.81
SCARNA15.3-201ENST00000626315 PPP1R13LQ8WUF5 828 aa3.77□□□□□ -1.81
SCARNA15.3-201ENST00000626315 PHACTR3Q96KR7 559 aa3.77□□□□□ -1.81
SCARNA15.3-201ENST00000626315 TCF25Q9BQ70 676 aa3.77□□□□□ -1.81
SCARNA15.3-201ENST00000626315 CSRNP2Q9H175 543 aa3.77□□□□□ -1.81
SCARNA15.3-201ENST00000626315 MKNK2Q9HBH9 465 aa3.77□□□□□ -1.81
SCARNA15.3-201ENST00000626315 PI4KBQ9UBF8 816 aa3.77□□□□□ -1.81
SCARNA15.3-201ENST00000626315 DKK3Q9UBP4 350 aa3.77□□□□□ -1.81
SCARNA15.3-201ENST00000626315 ZBTB21Q9ULJ3 1066 aa3.77□□□□□ -1.81
SCARNA15.3-201ENST00000626315 MRPL42Q9Y6G3 142 aaKnown RBP3.77□□□□□ -1.81
SCARNA15.3-201ENST00000626315 ATRQ13535 2644 aa3.77□□□□□ -1.81
SCARNA15.3-201ENST00000626315 PTPRFP10586 1907 aa3.77□□□□□ -1.81
SCARNA15.3-201ENST00000626315 RELNP78509 3460 aa3.77□□□□□ -1.81
SCARNA15.3-201ENST00000626315 NBPF19A0A087WUL8 3843 aa3.77□□□□□ -1.81
SCARNA15.3-201ENST00000626315 SCN5AQ14524 2016 aa3.77□□□□□ -1.81
SCARNA15.3-201ENST00000626315 A0A1B0GUL6 1792 aa3.76□□□□□ -1.81
SCARNA15.3-201ENST00000626315 CNTNAP5Q8WYK1 1306 aa3.76□□□□□ -1.81
SCARNA15.3-201ENST00000626315 RAD50Q92878 1312 aa3.76□□□□□ -1.81
SCARNA15.3-201ENST00000626315 KIAA1217Q5T5P2 1943 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms