RNA–Protein interactions for RNA: ENST00000625662.2

CHD2-205, Transcript of chromodomain helicase DNA binding protein 2, human

TSL 5

Gene CHD2, Length 5,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD2-205	ENST00000625662	ARHGAP44	Q17R89	818 aa		12.81	□□□□□ -0.36
CHD2-205	ENST00000625662	FKBP1C	Q5VVH2	108 aa		12.81	□□□□□ -0.36
CHD2-205	ENST00000625662	SMIM5	Q71RC9	77 aa		12.81	□□□□□ -0.36
CHD2-205	ENST00000625662	TRIM62	Q9BVG3	475 aa		12.81	□□□□□ -0.36
CHD2-205	ENST00000625662	SRRT	Q9BXP5	876 aa	Known RBP	12.81	□□□□□ -0.36
CHD2-205	ENST00000625662	MTMR4	Q9NYA4	1195 aa		12.81	□□□□□ -0.36
CHD2-205	ENST00000625662	PCDHA10	Q9Y5I2	948 aa		12.81	□□□□□ -0.36
CHD2-205	ENST00000625662	PPL	O60437	1756 aa		12.81	□□□□□ -0.36
CHD2-205	ENST00000625662	ADGRB1	O14514	1584 aa		12.81	□□□□□ -0.36
CHD2-205	ENST00000625662	SCP2	P22307	547 aa		12.81	□□□□□ -0.36
CHD2-205	ENST00000625662	DGKD	Q16760	1214 aa		12.81	□□□□□ -0.36
CHD2-205	ENST00000625662	ASAP2	O43150	1006 aa		12.81	□□□□□ -0.36
CHD2-205	ENST00000625662	ILDR1	Q86SU0	546 aa	Predicted RBP	12.81	□□□□□ -0.36
CHD2-205	ENST00000625662	DHTKD1	Q96HY7	919 aa	Predicted RBP	12.81	□□□□□ -0.36
CHD2-205	ENST00000625662	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	12.81	□□□□□ -0.36
CHD2-205	ENST00000625662	MAPK8IP1	Q9UQF2	711 aa		12.81	□□□□□ -0.36
CHD2-205	ENST00000625662	INPP5F	Q9Y2H2	1132 aa		12.81	□□□□□ -0.36
CHD2-205	ENST00000625662	ARHGAP4	P98171	946 aa		12.81	□□□□□ -0.36
CHD2-205	ENST00000625662	SCRN1	Q12765	414 aa		12.81	□□□□□ -0.36
CHD2-205	ENST00000625662	TEX2	Q8IWB9	1127 aa		12.81	□□□□□ -0.36
CHD2-205	ENST00000625662	SEPT1	Q8WYJ6	367 aa		12.81	□□□□□ -0.36
CHD2-205	ENST00000625662	CCDC51	Q96ER9	411 aa		12.81	□□□□□ -0.36
CHD2-205	ENST00000625662	BLZF1	Q9H2G9	400 aa		12.81	□□□□□ -0.36
CHD2-205	ENST00000625662	JPH1	Q9HDC5	661 aa	Predicted RBP	12.81	□□□□□ -0.36
CHD2-205	ENST00000625662	LMCD1	Q9NZU5	365 aa		12.81	□□□□□ -0.36
CHD2-205	ENST00000625662	IFNK	Q9P0W0	207 aa		12.81	□□□□□ -0.36
CHD2-205	ENST00000625662	KIAA0391	O15091	583 aa	Known RBP	12.8	□□□□□ -0.36
CHD2-205	ENST00000625662	HUS1	O60921	280 aa		12.8	□□□□□ -0.36
CHD2-205	ENST00000625662	HOXA10	P31260	410 aa	Predicted RBP	12.8	□□□□□ -0.36
CHD2-205	ENST00000625662	ZNF560	Q96MR9	790 aa		12.8	□□□□□ -0.36
CHD2-205	ENST00000625662	SPZ1	Q9BXG8	430 aa		12.8	□□□□□ -0.36
CHD2-205	ENST00000625662	TMEM39B	Q9GZU3	492 aa		12.8	□□□□□ -0.36
CHD2-205	ENST00000625662		A6NJR5	290 aa		12.8	□□□□□ -0.36
CHD2-205	ENST00000625662	TUBB	P07437	444 aa		12.8	□□□□□ -0.36
CHD2-205	ENST00000625662	BFSP1	Q12934	665 aa		12.8	□□□□□ -0.36
CHD2-205	ENST00000625662	ATG9A	Q7Z3C6	839 aa		12.8	□□□□□ -0.36
CHD2-205	ENST00000625662	TMTC1	Q8IUR5	882 aa		12.8	□□□□□ -0.36
CHD2-205	ENST00000625662	ADGRF4	Q8IZF3	695 aa		12.8	□□□□□ -0.36
CHD2-205	ENST00000625662	CCT6B	Q92526	530 aa		12.8	□□□□□ -0.36
CHD2-205	ENST00000625662	SYMPK	Q92797	1274 aa	Known RBP	12.8	□□□□□ -0.36
CHD2-205	ENST00000625662	HTATIP2	Q9BUP3	242 aa		12.8	□□□□□ -0.36
CHD2-205	ENST00000625662	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	12.8	□□□□□ -0.36
CHD2-205	ENST00000625662	PLA2G4B	P0C869	781 aa		12.8	□□□□□ -0.36
CHD2-205	ENST00000625662	ALDH3A1	P30838	453 aa		12.8	□□□□□ -0.36
CHD2-205	ENST00000625662	NSF	P46459	744 aa	Known RBP	12.8	□□□□□ -0.36
CHD2-205	ENST00000625662	AP3M2	P53677	418 aa		12.8	□□□□□ -0.36
CHD2-205	ENST00000625662	GSDMA	Q96QA5	445 aa		12.8	□□□□□ -0.36
CHD2-205	ENST00000625662	LSM14B	Q9BX40	385 aa	Known RBP	12.8	□□□□□ -0.36
CHD2-205	ENST00000625662	RAB20	Q9NX57	234 aa		12.8	□□□□□ -0.36
CHD2-205	ENST00000625662	IPO11	Q9UI26	975 aa	Known RBP	12.8	□□□□□ -0.36
CHD2-205	ENST00000625662	PCDHB4	Q9Y5E5	795 aa		12.8	□□□□□ -0.36
CHD2-205	ENST00000625662	PDS5A	Q29RF7	1337 aa	Known RBP	12.8	□□□□□ -0.36
CHD2-205	ENST00000625662		A0A1W2PQ27	194 aa		12.8	□□□□□ -0.36
CHD2-205	ENST00000625662		A0A1W2PQ64	194 aa		12.8	□□□□□ -0.36
CHD2-205	ENST00000625662		A0A1W2PQD8	194 aa		12.8	□□□□□ -0.36
CHD2-205	ENST00000625662	GIPC1	O14908	333 aa		12.8	□□□□□ -0.36
CHD2-205	ENST00000625662	MSC	O60682	206 aa		12.8	□□□□□ -0.36
CHD2-205	ENST00000625662	STAT5B	P51692	787 aa		12.8	□□□□□ -0.36
CHD2-205	ENST00000625662	MUM1L1	Q5H9M0	696 aa		12.8	□□□□□ -0.36
CHD2-205	ENST00000625662	RUFY4	Q6ZNE9	571 aa		12.8	□□□□□ -0.36
CHD2-205	ENST00000625662	FAM186B	Q8IYM0	893 aa		12.8	□□□□□ -0.36
CHD2-205	ENST00000625662	PPM1K	Q8N3J5	372 aa		12.8	□□□□□ -0.36
CHD2-205	ENST00000625662	MRPL4	Q9BYD3	311 aa	Known RBP	12.8	□□□□□ -0.36
CHD2-205	ENST00000625662	CPSF2	Q9P2I0	782 aa	Known RBP	12.8	□□□□□ -0.36
CHD2-205	ENST00000625662	SEL1L	Q9UBV2	794 aa		12.8	□□□□□ -0.36
CHD2-205	ENST00000625662	GSG1L2	A8MUP6	293 aa		12.79	□□□□□ -0.36
CHD2-205	ENST00000625662	NDUFB10	O96000	172 aa		12.79	□□□□□ -0.36
CHD2-205	ENST00000625662	PFKFB1	P16118	471 aa		12.79	□□□□□ -0.36
CHD2-205	ENST00000625662	CAP2	P40123	477 aa		12.79	□□□□□ -0.36
CHD2-205	ENST00000625662	TUBB2A	Q13885	445 aa		12.79	□□□□□ -0.36
CHD2-205	ENST00000625662	TUBB2B	Q9BVA1	445 aa		12.79	□□□□□ -0.36
CHD2-205	ENST00000625662	DPP7	Q9UHL4	492 aa		12.79	□□□□□ -0.36
CHD2-205	ENST00000625662	POLI	Q9UNA4	740 aa		12.79	□□□□□ -0.36
CHD2-205	ENST00000625662	BZW2	Q9Y6E2	419 aa	Known RBP	12.79	□□□□□ -0.36
CHD2-205	ENST00000625662	CLDN3	O15551	220 aa		12.79	□□□□□ -0.36
CHD2-205	ENST00000625662	SMARCA1	P28370	1054 aa		12.79	□□□□□ -0.36
CHD2-205	ENST00000625662	HS1BP3	Q53T59	392 aa		12.79	□□□□□ -0.36
CHD2-205	ENST00000625662	MAP1S	Q66K74	1059 aa	Predicted RBP	12.79	□□□□□ -0.36
CHD2-205	ENST00000625662	MAATS1	Q7Z4T9	603 aa		12.79	□□□□□ -0.36
CHD2-205	ENST00000625662	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	12.79	□□□□□ -0.36
CHD2-205	ENST00000625662	TADA2B	Q86TJ2	420 aa		12.79	□□□□□ -0.36
CHD2-205	ENST00000625662	EHD4	Q9H223	541 aa		12.79	□□□□□ -0.36
CHD2-205	ENST00000625662	SKIL	P12757	684 aa		12.79	□□□□□ -0.36
CHD2-205	ENST00000625662	SLC39A14	Q15043	492 aa		12.79	□□□□□ -0.36
CHD2-205	ENST00000625662	RNF219	Q5W0B1	726 aa	Predicted RBP	12.79	□□□□□ -0.36
CHD2-205	ENST00000625662	POTEA	Q6S8J7	498 aa		12.79	□□□□□ -0.36
CHD2-205	ENST00000625662	AFAP1L2	Q8N4X5	818 aa		12.79	□□□□□ -0.36
CHD2-205	ENST00000625662	GJA10	Q969M2	543 aa		12.79	□□□□□ -0.36
CHD2-205	ENST00000625662	TRMT1	Q9NXH9	659 aa	Known RBP	12.79	□□□□□ -0.36
CHD2-205	ENST00000625662	UST	Q9Y2C2	406 aa		12.79	□□□□□ -0.36
CHD2-205	ENST00000625662	SNAP23	O00161	211 aa		12.79	□□□□□ -0.36
CHD2-205	ENST00000625662	ACTN4	O43707	911 aa	Known RBP	12.79	□□□□□ -0.36
CHD2-205	ENST00000625662	PRPSAP1	Q14558	356 aa		12.79	□□□□□ -0.36
CHD2-205	ENST00000625662	GNAS	Q5JWF2	1037 aa		12.79	□□□□□ -0.36
CHD2-205	ENST00000625662	CCDC122	Q5T0U0	273 aa		12.79	□□□□□ -0.36
CHD2-205	ENST00000625662	KRBA2	Q6ZNG9	492 aa		12.79	□□□□□ -0.36
CHD2-205	ENST00000625662	TIGD1	Q96MW7	591 aa		12.79	□□□□□ -0.36
CHD2-205	ENST00000625662	KIF9	Q9HAQ2	790 aa		12.79	□□□□□ -0.36
CHD2-205	ENST00000625662	NFE2L3	Q9Y4A8	694 aa		12.79	□□□□□ -0.36
CHD2-205	ENST00000625662	STRN	O43815	780 aa		12.78	□□□□□ -0.36

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