RNA–Protein interactions for RNA: ENST00000625275.2

R3HCC1-210, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene R3HCC1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-210ENST00000625275 RBL2Q08999 1139 aa22.77■■□□□ 1.24
R3HCC1-210ENST00000625275 WASF1Q92558 559 aa22.77■■□□□ 1.24
R3HCC1-210ENST00000625275 FTOQ9C0B1 505 aaKnown RBP eCLIP22.77■■□□□ 1.24
R3HCC1-210ENST00000625275 PRDM12Q9H4Q4 367 aa22.77■■□□□ 1.24
R3HCC1-210ENST00000625275 MLXIPQ9HAP2 919 aa22.77■■□□□ 1.24
R3HCC1-210ENST00000625275 VPS54Q9P1Q0 977 aa22.77■■□□□ 1.24
R3HCC1-210ENST00000625275 PCDHA11Q9Y5I1 949 aa22.77■■□□□ 1.24
R3HCC1-210ENST00000625275 CHD7Q9P2D1 2997 aa22.76■■□□□ 1.23
R3HCC1-210ENST00000625275 ICAM3P32942 547 aa22.76■■□□□ 1.23
R3HCC1-210ENST00000625275 NAPAP54920 295 aa22.76■■□□□ 1.23
R3HCC1-210ENST00000625275 USP17L6PQ6QN14 398 aa22.76■■□□□ 1.23
R3HCC1-210ENST00000625275 LRRC8DQ7L1W4 858 aa22.76■■□□□ 1.23
R3HCC1-210ENST00000625275 GJB4Q9NTQ9 266 aa22.76■■□□□ 1.23
R3HCC1-210ENST00000625275 MEIS2O14770 477 aa22.75■■□□□ 1.23
R3HCC1-210ENST00000625275 HSP90AA1P07900 732 aaKnown RBP22.75■■□□□ 1.23
R3HCC1-210ENST00000625275 SELPP16109 830 aa22.75■■□□□ 1.23
R3HCC1-210ENST00000625275 PPP1R18Q6NYC8 613 aa22.75■■□□□ 1.23
R3HCC1-210ENST00000625275 FAM184AQ8NB25 1140 aa22.75■■□□□ 1.23
R3HCC1-210ENST00000625275 SLC9A7Q96T83 725 aa22.75■■□□□ 1.23
R3HCC1-210ENST00000625275 FIBPO43427 364 aa22.74■■□□□ 1.23
R3HCC1-210ENST00000625275 SEMA3FQ13275 785 aa22.74■■□□□ 1.23
R3HCC1-210ENST00000625275 PTK7Q13308 1070 aa22.74■■□□□ 1.23
R3HCC1-210ENST00000625275 PCNX4Q63HM2 1172 aa22.74■■□□□ 1.23
R3HCC1-210ENST00000625275 PPP2R2DQ66LE6 453 aa22.74■■□□□ 1.23
R3HCC1-210ENST00000625275 C16orf70Q9BSU1 422 aa22.74■■□□□ 1.23
R3HCC1-210ENST00000625275 SH3GLB2Q9NR46 395 aa22.74■■□□□ 1.23
R3HCC1-210ENST00000625275 TTC28Q96AY4 2481 aa22.74■■□□□ 1.23
R3HCC1-210ENST00000625275 PRRC2BQ5JSZ5 2229 aaKnown RBP22.74■■□□□ 1.23
R3HCC1-210ENST00000625275 SPATA31C2B4DYI2 1134 aa22.73■■□□□ 1.23
R3HCC1-210ENST00000625275 BAIAP3O94812 1187 aa22.73■■□□□ 1.23
R3HCC1-210ENST00000625275 PARNO95453 639 aaKnown RBP22.73■■□□□ 1.23
R3HCC1-210ENST00000625275 CKBP12277 381 aa22.73■■□□□ 1.23
R3HCC1-210ENST00000625275 MYOGP15173 224 aa22.73■■□□□ 1.23
R3HCC1-210ENST00000625275 NEDD9Q14511 834 aa22.73■■□□□ 1.23
R3HCC1-210ENST00000625275 XRRA1Q6P2D8 792 aa22.73■■□□□ 1.23
R3HCC1-210ENST00000625275 METTL7BQ6UX53 244 aa22.73■■□□□ 1.23
R3HCC1-210ENST00000625275 SPRYD3Q8NCJ5 442 aa22.73■■□□□ 1.23
R3HCC1-210ENST00000625275 RTEL1Q9NZ71 1219 aa22.73■■□□□ 1.23
R3HCC1-210ENST00000625275 COL4A4P53420 1690 aaPredicted RBP22.73■■□□□ 1.23
R3HCC1-210ENST00000625275 NOP56O00567 594 aaKnown RBP22.73■■□□□ 1.23
R3HCC1-210ENST00000625275 LGALS2P05162 132 aa22.73■■□□□ 1.23
R3HCC1-210ENST00000625275 FOSBP53539 338 aa22.73■■□□□ 1.23
R3HCC1-210ENST00000625275 USP38Q8NB14 1042 aa22.73■■□□□ 1.23
R3HCC1-210ENST00000625275 CCDC148Q8NFR7 591 aa22.73■■□□□ 1.23
R3HCC1-210ENST00000625275 CCDC12Q8WUD4 166 aaPredicted RBP22.73■■□□□ 1.23
R3HCC1-210ENST00000625275 BCAS3Q9H6U6 928 aa22.73■■□□□ 1.23
R3HCC1-210ENST00000625275 ESYT2A0FGR8 921 aa22.72■■□□□ 1.23
R3HCC1-210ENST00000625275 TRIM71Q2Q1W2 868 aaKnown RBP22.72■■□□□ 1.23
R3HCC1-210ENST00000625275 PHOSPHO2Q8TCD6 241 aa22.72■■□□□ 1.23
R3HCC1-210ENST00000625275 COL25A1Q9BXS0 654 aaPredicted RBP22.72■■□□□ 1.23
R3HCC1-210ENST00000625275 ZMYND12Q9H0C1 365 aa22.72■■□□□ 1.23
R3HCC1-210ENST00000625275 PSTPIP2Q9H939 334 aa22.72■■□□□ 1.23
R3HCC1-210ENST00000625275 KIF3AQ9Y496 699 aa22.72■■□□□ 1.23
R3HCC1-210ENST00000625275 TRANK1O15050 2925 aa22.71■■□□□ 1.23
R3HCC1-210ENST00000625275 SIP14410 1827 aa22.71■■□□□ 1.23
R3HCC1-210ENST00000625275 SMCO2A6NFE2 343 aa22.71■■□□□ 1.23
R3HCC1-210ENST00000625275 H3BRB1 525 aa22.71■■□□□ 1.23
R3HCC1-210ENST00000625275 XBP1P17861 261 aa22.71■■□□□ 1.23
R3HCC1-210ENST00000625275 ZNF200P98182 395 aaPredicted RBP22.71■■□□□ 1.23
R3HCC1-210ENST00000625275 HIC1Q14526 733 aa22.71■■□□□ 1.23
R3HCC1-210ENST00000625275 GPNMBQ14956 572 aa22.71■■□□□ 1.23
R3HCC1-210ENST00000625275 CYFIP1Q7L576 1253 aa22.71■■□□□ 1.23
R3HCC1-210ENST00000625275 FAM177A1Q8N128 213 aaPredicted RBP22.71■■□□□ 1.23
R3HCC1-210ENST00000625275 WNT8BQ93098 351 aa22.71■■□□□ 1.23
R3HCC1-210ENST00000625275 C8orf76Q96K31 380 aa22.71■■□□□ 1.23
R3HCC1-210ENST00000625275 PHF20Q9BVI0 1012 aa22.71■■□□□ 1.23
R3HCC1-210ENST00000625275 TUT1Q9H6E5 874 aaKnown RBP22.71■■□□□ 1.23
R3HCC1-210ENST00000625275 KCNJ14Q9UNX9 436 aa22.71■■□□□ 1.23
R3HCC1-210ENST00000625275 NCOR1O75376 2440 aa22.71■■□□□ 1.23
R3HCC1-210ENST00000625275 ADAMTS3O15072 1205 aa22.7■■□□□ 1.22
R3HCC1-210ENST00000625275 CXCL10P02778 98 aa22.7■■□□□ 1.22
R3HCC1-210ENST00000625275 KCNJ6P48051 423 aa22.7■■□□□ 1.22
R3HCC1-210ENST00000625275 ADCY7P51828 1080 aa22.7■■□□□ 1.22
R3HCC1-210ENST00000625275 ADGRE1Q14246 886 aa22.7■■□□□ 1.22
R3HCC1-210ENST00000625275 CNKSR3Q6P9H4 555 aa22.7■■□□□ 1.22
R3HCC1-210ENST00000625275 NLRX1Q86UT6 975 aa22.7■■□□□ 1.22
R3HCC1-210ENST00000625275 SENP7Q9BQF6 1050 aa22.7■■□□□ 1.22
R3HCC1-210ENST00000625275 RIC8AQ9NPQ8 531 aa22.7■■□□□ 1.22
R3HCC1-210ENST00000625275 LOXHD1Q8IVV2 1947 aa22.7■■□□□ 1.22
R3HCC1-210ENST00000625275 NBNO60934 754 aa22.69■■□□□ 1.22
R3HCC1-210ENST00000625275 CA3P07451 260 aa22.69■■□□□ 1.22
R3HCC1-210ENST00000625275 NLRP5P59047 1200 aa22.69■■□□□ 1.22
R3HCC1-210ENST00000625275 TRIM29Q14134 588 aa22.69■■□□□ 1.22
R3HCC1-210ENST00000625275 NPY5RQ15761 445 aa22.69■■□□□ 1.22
R3HCC1-210ENST00000625275 KRT40Q6A162 431 aa22.69■■□□□ 1.22
R3HCC1-210ENST00000625275 TRAF7Q6Q0C0 670 aa22.69■■□□□ 1.22
R3HCC1-210ENST00000625275 SERINC5Q86VE9 423 aa22.69■■□□□ 1.22
R3HCC1-210ENST00000625275 HERC6Q8IVU3 1022 aa22.69■■□□□ 1.22
R3HCC1-210ENST00000625275 GPR20Q99678 358 aa22.69■■□□□ 1.22
R3HCC1-210ENST00000625275 C6orf50Q9HD87 102 aa22.69■■□□□ 1.22
R3HCC1-210ENST00000625275 C17orf102A2RUQ5 167 aa22.68■■□□□ 1.22
R3HCC1-210ENST00000625275 SMIM10L2AP0DMW4 78 aa22.68■■□□□ 1.22
R3HCC1-210ENST00000625275 SMIM10L2BP0DMW5 78 aa22.68■■□□□ 1.22
R3HCC1-210ENST00000625275 HOXC8P31273 242 aa22.68■■□□□ 1.22
R3HCC1-210ENST00000625275 GUCY1B3Q02153 619 aa22.68■■□□□ 1.22
R3HCC1-210ENST00000625275 UBE2SQ16763 222 aa22.68■■□□□ 1.22
R3HCC1-210ENST00000625275 ZNF618Q5T7W0 954 aa22.68■■□□□ 1.22
R3HCC1-210ENST00000625275 FBXO18Q8NFZ0 1043 aa22.68■■□□□ 1.22
R3HCC1-210ENST00000625275 GPRASP2Q96D09 838 aa22.68■■□□□ 1.22
R3HCC1-210ENST00000625275 WDR81Q562E7 1941 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms