RNA–Protein interactions for RNA: ENST00000624166.3

ATRX-214, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 4,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-214ENST00000624166 VPS37BQ9H9H4 285 aa12.83□□□□□ -0.36
ATRX-214ENST00000624166 INTS13Q9NVM9 706 aa12.83□□□□□ -0.36
ATRX-214ENST00000624166 TCHHQ07283 1943 aa12.83□□□□□ -0.36
ATRX-214ENST00000624166 MIF4GDA9UHW6 222 aaKnown RBP12.83□□□□□ -0.36
ATRX-214ENST00000624166 SKIP12755 728 aa12.83□□□□□ -0.36
ATRX-214ENST00000624166 PMS2P54278 862 aa12.83□□□□□ -0.36
ATRX-214ENST00000624166 NTRK3Q16288 839 aa12.83□□□□□ -0.36
ATRX-214ENST00000624166 SLC18A3Q16572 532 aa12.83□□□□□ -0.36
ATRX-214ENST00000624166 RHOT2Q8IXI1 618 aa12.83□□□□□ -0.36
ATRX-214ENST00000624166 ARL8AQ96BM9 186 aa12.83□□□□□ -0.36
ATRX-214ENST00000624166 ISCUQ9H1K1 167 aa12.83□□□□□ -0.36
ATRX-214ENST00000624166 FAM53CQ9NYF3 392 aa12.83□□□□□ -0.36
ATRX-214ENST00000624166 NBPF26B4DH59 902 aa12.82□□□□□ -0.36
ATRX-214ENST00000624166 NBPF15Q8N660 670 aa12.82□□□□□ -0.36
ATRX-214ENST00000624166 CALR3Q96L12 384 aaKnown RBP12.82□□□□□ -0.36
ATRX-214ENST00000624166 C7orf25Q9BPX7 421 aa12.82□□□□□ -0.36
ATRX-214ENST00000624166 TUBB6Q9BUF5 446 aa12.82□□□□□ -0.36
ATRX-214ENST00000624166 SLC24A3Q9HC58 644 aa12.82□□□□□ -0.36
ATRX-214ENST00000624166 DMGDHQ9UI17 866 aaKnown RBP12.82□□□□□ -0.36
ATRX-214ENST00000624166 PSMC2P35998 433 aaKnown RBP12.82□□□□□ -0.36
ATRX-214ENST00000624166 HERVK_113P62684 666 aa12.82□□□□□ -0.36
ATRX-214ENST00000624166 UAP1Q16222 522 aaPredicted RBP12.82□□□□□ -0.36
ATRX-214ENST00000624166 WDR44Q5JSH3 913 aa12.82□□□□□ -0.36
ATRX-214ENST00000624166 SWT1Q5T5J6 900 aaKnown RBP12.82□□□□□ -0.36
ATRX-214ENST00000624166 CAPRIN2Q6IMN6 1127 aaKnown RBP12.82□□□□□ -0.36
ATRX-214ENST00000624166 MS4A14Q96JA4 679 aa12.82□□□□□ -0.36
ATRX-214ENST00000624166 GCNT4Q9P109 453 aa12.82□□□□□ -0.36
ATRX-214ENST00000624166 SCOCQ9UIL1 159 aa12.82□□□□□ -0.36
ATRX-214ENST00000624166 EXOC7Q9UPT5 735 aa12.82□□□□□ -0.36
ATRX-214ENST00000624166 NOC2LQ9Y3T9 749 aaKnown RBP12.82□□□□□ -0.36
ATRX-214ENST00000624166 SYNGAP1Q96PV0 1343 aa12.82□□□□□ -0.36
ATRX-214ENST00000624166 EIF6P56537 245 aaKnown RBP12.82□□□□□ -0.36
ATRX-214ENST00000624166 HDLBPQ00341 1268 aaKnown RBP12.82□□□□□ -0.36
ATRX-214ENST00000624166 MESDQ14696 234 aa12.82□□□□□ -0.36
ATRX-214ENST00000624166 CRYMQ14894 314 aa12.82□□□□□ -0.36
ATRX-214ENST00000624166 ARHGAP27Q6ZUM4 889 aa12.82□□□□□ -0.36
ATRX-214ENST00000624166 TRMT1LQ7Z2T5 733 aaKnown RBP12.82□□□□□ -0.36
ATRX-214ENST00000624166 MRRFQ96E11 262 aaKnown RBP12.82□□□□□ -0.36
ATRX-214ENST00000624166 SPDL1Q96EA4 605 aa12.82□□□□□ -0.36
ATRX-214ENST00000624166 DNAJC5Q9H3Z4 198 aa12.82□□□□□ -0.36
ATRX-214ENST00000624166 LRRC10BA6NIK2 292 aa12.82□□□□□ -0.36
ATRX-214ENST00000624166 PP2D1A8MPX8 630 aa12.82□□□□□ -0.36
ATRX-214ENST00000624166 I3L4J1 428 aa12.82□□□□□ -0.36
ATRX-214ENST00000624166 GFPT2O94808 682 aa12.82□□□□□ -0.36
ATRX-214ENST00000624166 ANXA13P27216 316 aa12.82□□□□□ -0.36
ATRX-214ENST00000624166 SKOR1P84550 965 aa12.82□□□□□ -0.36
ATRX-214ENST00000624166 MAP7Q14244 749 aa12.82□□□□□ -0.36
ATRX-214ENST00000624166 ASPRV1Q53RT3 343 aa12.82□□□□□ -0.36
ATRX-214ENST00000624166 SH2D4BQ5SQS7 431 aa12.82□□□□□ -0.36
ATRX-214ENST00000624166 TSC22D3Q99576 134 aa12.82□□□□□ -0.36
ATRX-214ENST00000624166 LACRTQ9GZZ8 138 aa12.82□□□□□ -0.36
ATRX-214ENST00000624166 SNX24Q9Y343 169 aa12.82□□□□□ -0.36
ATRX-214ENST00000624166 LMNAP02545 664 aaKnown RBP12.81□□□□□ -0.36
ATRX-214ENST00000624166 PHBP35232 272 aa12.81□□□□□ -0.36
ATRX-214ENST00000624166 CYP2J2P51589 502 aa12.81□□□□□ -0.36
ATRX-214ENST00000624166 MDM2Q00987 491 aaPredicted RBP12.81□□□□□ -0.36
ATRX-214ENST00000624166 RASIP1Q5U651 963 aa12.81□□□□□ -0.36
ATRX-214ENST00000624166 CYB5D1Q6P9G0 228 aa12.81□□□□□ -0.36
ATRX-214ENST00000624166 TMEM139Q8IV31 216 aa12.81□□□□□ -0.36
ATRX-214ENST00000624166 FAM186BQ8IYM0 893 aa12.81□□□□□ -0.36
ATRX-214ENST00000624166 GJA10Q969M2 543 aa12.81□□□□□ -0.36
ATRX-214ENST00000624166 DONSONQ9NYP3 566 aa12.81□□□□□ -0.36
ATRX-214ENST00000624166 AXIN2Q9Y2T1 843 aa12.81□□□□□ -0.36
ATRX-214ENST00000624166 DAPK3O43293 454 aa12.81□□□□□ -0.36
ATRX-214ENST00000624166 GAP43P17677 238 aa12.81□□□□□ -0.36
ATRX-214ENST00000624166 DDB1Q16531 1140 aa12.81□□□□□ -0.36
ATRX-214ENST00000624166 LGSNQ5TDP6 509 aa12.81□□□□□ -0.36
ATRX-214ENST00000624166 WDR78Q5VTH9 848 aa12.81□□□□□ -0.36
ATRX-214ENST00000624166 FERMT1Q9BQL6 677 aa12.81□□□□□ -0.36
ATRX-214ENST00000624166 SEC31BQ9NQW1 1179 aa12.81□□□□□ -0.36
ATRX-214ENST00000624166 XDHP47989 1333 aa12.81□□□□□ -0.36
ATRX-214ENST00000624166 MAPK13O15264 365 aa12.81□□□□□ -0.36
ATRX-214ENST00000624166 ORC4O43929 436 aa12.81□□□□□ -0.36
ATRX-214ENST00000624166 FCER1AP12319 257 aa12.81□□□□□ -0.36
ATRX-214ENST00000624166 IRX4P78413 519 aa12.81□□□□□ -0.36
ATRX-214ENST00000624166 XPO6Q96QU8 1125 aaKnown RBP12.81□□□□□ -0.36
ATRX-214ENST00000624166 IWS1Q96ST2 819 aa12.81□□□□□ -0.36
ATRX-214ENST00000624166 VCX3AQ9NNX9 186 aa12.81□□□□□ -0.36
ATRX-214ENST00000624166 PACSIN2Q9UNF0 486 aaPredicted RBP12.81□□□□□ -0.36
ATRX-214ENST00000624166 PTPN22Q9Y2R2 807 aa12.81□□□□□ -0.36
ATRX-214ENST00000624166 TMEM131LA2VDJ0 1609 aa12.8□□□□□ -0.36
ATRX-214ENST00000624166 SYF2O95926 243 aaKnown RBP12.8□□□□□ -0.36
ATRX-214ENST00000624166 PLA2G4BP0C869 781 aa12.8□□□□□ -0.36
ATRX-214ENST00000624166 LMNB2Q03252 620 aa12.8□□□□□ -0.36
ATRX-214ENST00000624166 DHX34Q14147 1143 aaKnown RBP12.8□□□□□ -0.36
ATRX-214ENST00000624166 AENQ8WTP8 325 aaKnown RBP12.8□□□□□ -0.36
ATRX-214ENST00000624166 HOOK2Q96ED9 719 aa12.8□□□□□ -0.36
ATRX-214ENST00000624166 ACSBG1Q96GR2 724 aa12.8□□□□□ -0.36
ATRX-214ENST00000624166 SYNCQ9H7C4 482 aa12.8□□□□□ -0.36
ATRX-214ENST00000624166 PRM3Q9NNZ6 103 aa12.8□□□□□ -0.36
ATRX-214ENST00000624166 AGTP01019 485 aa12.8□□□□□ -0.36
ATRX-214ENST00000624166 VPS41P49754 854 aa12.8□□□□□ -0.36
ATRX-214ENST00000624166 SESN3P58005 492 aa12.8□□□□□ -0.36
ATRX-214ENST00000624166 KCNH2Q12809 1159 aa12.8□□□□□ -0.36
ATRX-214ENST00000624166 FAM178BQ8IXR5 827 aa12.8□□□□□ -0.36
ATRX-214ENST00000624166 SRBD1Q8N5C6 995 aaKnown RBP12.8□□□□□ -0.36
ATRX-214ENST00000624166 RAD54LQ92698 747 aa12.8□□□□□ -0.36
ATRX-214ENST00000624166 CD248Q9HCU0 757 aa12.8□□□□□ -0.36
ATRX-214ENST00000624166 TFR2Q9UP52 801 aa12.8□□□□□ -0.36
ATRX-214ENST00000624166 ZBTB1Q9Y2K1 713 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms