RNA–Protein interactions for RNA: ENST00000623342.1

SND1-IT1-201, SND1 intronic transcript 1, humanhuman

BASIC

Gene SND1-IT1, Length 2,481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1-201ENST00000623342 NUCKS1Q9H1E3 243 aaKnown RBP9.2□□□□□ -0.94
SND1-IT1-201ENST00000623342 KCTD10Q9H3F6 313 aa9.2□□□□□ -0.94
SND1-IT1-201ENST00000623342 HERC5Q9UII4 1024 aaKnown RBP9.2□□□□□ -0.94
SND1-IT1-201ENST00000623342 A0A1W2PRG0 241 aa9.19□□□□□ -0.94
SND1-IT1-201ENST00000623342 MAP2K7O14733 419 aa9.19□□□□□ -0.94
SND1-IT1-201ENST00000623342 OPLAHO14841 1288 aa9.19□□□□□ -0.94
SND1-IT1-201ENST00000623342 CYP3A4P08684 503 aa9.19□□□□□ -0.94
SND1-IT1-201ENST00000623342 SPATA31C1P0DKV0 1188 aa9.19□□□□□ -0.94
SND1-IT1-201ENST00000623342 TRAF1Q13077 416 aa9.19□□□□□ -0.94
SND1-IT1-201ENST00000623342 SMC1AQ14683 1233 aaKnown RBP9.19□□□□□ -0.94
SND1-IT1-201ENST00000623342 RRP1BQ14684 758 aaKnown RBP9.19□□□□□ -0.94
SND1-IT1-201ENST00000623342 EDRF1Q3B7T1 1238 aa9.19□□□□□ -0.94
SND1-IT1-201ENST00000623342 TRIM59Q8IWR1 403 aa9.19□□□□□ -0.94
SND1-IT1-201ENST00000623342 CCDC155Q8N6L0 562 aa9.19□□□□□ -0.94
SND1-IT1-201ENST00000623342 TRIM58Q8NG06 486 aa9.19□□□□□ -0.94
SND1-IT1-201ENST00000623342 SMCR8Q8TEV9 937 aaPredicted RBP9.19□□□□□ -0.94
SND1-IT1-201ENST00000623342 ZHX3Q9H4I2 956 aa9.19□□□□□ -0.94
SND1-IT1-201ENST00000623342 SH2D4AQ9H788 454 aa9.19□□□□□ -0.94
SND1-IT1-201ENST00000623342 CEP72Q9P209 647 aa9.19□□□□□ -0.94
SND1-IT1-201ENST00000623342 FAM184BQ9ULE4 1060 aa9.19□□□□□ -0.94
SND1-IT1-201ENST00000623342 PRR12Q9ULL5 1215 aa9.19□□□□□ -0.94
SND1-IT1-201ENST00000623342 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.19□□□□□ -0.94
SND1-IT1-201ENST00000623342 SSU72P8A0A1W2PR75 194 aa9.19□□□□□ -0.94
SND1-IT1-201ENST00000623342 YDJCA8MPS7 323 aa9.19□□□□□ -0.94
SND1-IT1-201ENST00000623342 PIK3CDO00329 1044 aa9.19□□□□□ -0.94
SND1-IT1-201ENST00000623342 MSH4O15457 936 aa9.19□□□□□ -0.94
SND1-IT1-201ENST00000623342 PPIP5K2O43314 1243 aa9.19□□□□□ -0.94
SND1-IT1-201ENST00000623342 SRGAP2O75044 1071 aa9.19□□□□□ -0.94
SND1-IT1-201ENST00000623342 TACC1O75410 805 aa9.19□□□□□ -0.94
SND1-IT1-201ENST00000623342 PSMC6P62333 389 aa9.19□□□□□ -0.94
SND1-IT1-201ENST00000623342 VSNL1P62760 191 aa9.19□□□□□ -0.94
SND1-IT1-201ENST00000623342 ADAM9Q13443 819 aa9.19□□□□□ -0.94
SND1-IT1-201ENST00000623342 GIT2Q14161 759 aa9.19□□□□□ -0.94
SND1-IT1-201ENST00000623342 WDR93Q6P2C0 686 aa9.19□□□□□ -0.94
SND1-IT1-201ENST00000623342 HDXQ7Z353 690 aa9.19□□□□□ -0.94
SND1-IT1-201ENST00000623342 TEX2Q8IWB9 1127 aa9.19□□□□□ -0.94
SND1-IT1-201ENST00000623342 TXLNBQ8N3L3 684 aa9.19□□□□□ -0.94
SND1-IT1-201ENST00000623342 SYN2Q92777 582 aaPredicted RBP9.19□□□□□ -0.94
SND1-IT1-201ENST00000623342 CAMKK2Q96RR4 588 aa9.19□□□□□ -0.94
SND1-IT1-201ENST00000623342 MMS19Q96T76 1030 aa9.19□□□□□ -0.94
SND1-IT1-201ENST00000623342 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.19□□□□□ -0.94
SND1-IT1-201ENST00000623342 ARHGEF10LQ9HCE6 1279 aa9.19□□□□□ -0.94
SND1-IT1-201ENST00000623342 ABCB6Q9NP58 842 aa9.19□□□□□ -0.94
SND1-IT1-201ENST00000623342 TMOD2Q9NZR1 351 aa9.19□□□□□ -0.94
SND1-IT1-201ENST00000623342 JRKLQ9Y4A0 524 aa9.19□□□□□ -0.94
SND1-IT1-201ENST00000623342 MEIS1O00470 390 aa9.18□□□□□ -0.94
SND1-IT1-201ENST00000623342 CETN3O15182 167 aa9.18□□□□□ -0.94
SND1-IT1-201ENST00000623342 NOL4O94818 638 aa9.18□□□□□ -0.94
SND1-IT1-201ENST00000623342 HOXA13P31271 388 aaPredicted RBP9.18□□□□□ -0.94
SND1-IT1-201ENST00000623342 ZNF76P36508 570 aa9.18□□□□□ -0.94
SND1-IT1-201ENST00000623342 STAT2P52630 851 aa9.18□□□□□ -0.94
SND1-IT1-201ENST00000623342 USP14P54578 494 aa9.18□□□□□ -0.94
SND1-IT1-201ENST00000623342 PABPC4Q13310 644 aaKnown RBP eCLIP9.18□□□□□ -0.94
SND1-IT1-201ENST00000623342 ASTE1Q2TB18 679 aaPredicted RBP9.18□□□□□ -0.94
SND1-IT1-201ENST00000623342 SPICE1Q8N0Z3 855 aa9.18□□□□□ -0.94
SND1-IT1-201ENST00000623342 CAPZA3Q96KX2 299 aa9.18□□□□□ -0.94
SND1-IT1-201ENST00000623342 LSM14BQ9BX40 385 aaKnown RBP9.18□□□□□ -0.94
SND1-IT1-201ENST00000623342 JADE2Q9NQC1 790 aa9.18□□□□□ -0.94
SND1-IT1-201ENST00000623342 VAV3Q9UKW4 847 aa9.18□□□□□ -0.94
SND1-IT1-201ENST00000623342 L1RE1Q9UN81 338 aa9.18□□□□□ -0.94
SND1-IT1-201ENST00000623342 PJA2O43164 708 aa9.17□□□□□ -0.94
SND1-IT1-201ENST00000623342 TAL1P17542 331 aaPredicted RBP9.17□□□□□ -0.94
SND1-IT1-201ENST00000623342 MCM3P25205 808 aa9.17□□□□□ -0.94
SND1-IT1-201ENST00000623342 OAS2P29728 719 aaKnown RBP9.17□□□□□ -0.94
SND1-IT1-201ENST00000623342 MAGEA1P43355 309 aa9.17□□□□□ -0.94
SND1-IT1-201ENST00000623342 SLC9C1Q4G0N8 1177 aa9.17□□□□□ -0.94
SND1-IT1-201ENST00000623342 FAM83BQ5T0W9 1011 aa9.17□□□□□ -0.94
SND1-IT1-201ENST00000623342 SFMBT2Q5VUG0 894 aa9.17□□□□□ -0.94
SND1-IT1-201ENST00000623342 HGSNATQ68CP4 663 aa9.17□□□□□ -0.94
SND1-IT1-201ENST00000623342 MSL3Q8N5Y2 521 aaKnown RBP9.17□□□□□ -0.94
SND1-IT1-201ENST00000623342 KCTD17Q8N5Z5 321 aa9.17□□□□□ -0.94
SND1-IT1-201ENST00000623342 CAGE1Q8TC20 777 aa9.17□□□□□ -0.94
SND1-IT1-201ENST00000623342 REEP2Q9BRK0 252 aa9.17□□□□□ -0.94
SND1-IT1-201ENST00000623342 POLR3CQ9BUI4 534 aaPredicted RBP9.17□□□□□ -0.94
SND1-IT1-201ENST00000623342 NLRC4Q9NPP4 1024 aa9.17□□□□□ -0.94
SND1-IT1-201ENST00000623342 TRAF3IP3Q9Y228 551 aa9.17□□□□□ -0.94
SND1-IT1-201ENST00000623342 SPDYE2BA6NHP3 402 aa9.17□□□□□ -0.94
SND1-IT1-201ENST00000623342 TCP10L2B9ZVM9 353 aa9.17□□□□□ -0.94
SND1-IT1-201ENST00000623342 POLR3GO15318 223 aaPredicted RBP9.17□□□□□ -0.94
SND1-IT1-201ENST00000623342 SERPING1P05155 500 aa9.17□□□□□ -0.94
SND1-IT1-201ENST00000623342 SPDYE6P0CI01 402 aa9.17□□□□□ -0.94
SND1-IT1-201ENST00000623342 NR2F2P24468 414 aa9.17□□□□□ -0.94
SND1-IT1-201ENST00000623342 EPS15P42566 896 aa9.17□□□□□ -0.94
SND1-IT1-201ENST00000623342 ECE1P42892 770 aa9.17□□□□□ -0.94
SND1-IT1-201ENST00000623342 CASP5P51878 434 aa9.17□□□□□ -0.94
SND1-IT1-201ENST00000623342 SLC15A2Q16348 729 aa9.17□□□□□ -0.94
SND1-IT1-201ENST00000623342 KNOP1Q1ED39 458 aaKnown RBP9.17□□□□□ -0.94
SND1-IT1-201ENST00000623342 TDRD12Q587J7 1177 aaKnown RBP9.17□□□□□ -0.94
SND1-IT1-201ENST00000623342 IQCEQ6IPM2 695 aa9.17□□□□□ -0.94
SND1-IT1-201ENST00000623342 EPM2AIP1Q7L775 607 aaPredicted RBP9.17□□□□□ -0.94
SND1-IT1-201ENST00000623342 SFR1Q86XK3 245 aa9.17□□□□□ -0.94
SND1-IT1-201ENST00000623342 ALS2CR12Q96Q35 445 aa9.17□□□□□ -0.94
SND1-IT1-201ENST00000623342 MLXIPQ9HAP2 919 aa9.17□□□□□ -0.94
SND1-IT1-201ENST00000623342 GOPCQ9HD26 462 aa9.17□□□□□ -0.94
SND1-IT1-201ENST00000623342 RNF216Q9NWF9 866 aaPredicted RBP9.17□□□□□ -0.94
SND1-IT1-201ENST00000623342 SNX12Q9UMY4 172 aa9.17□□□□□ -0.94
SND1-IT1-201ENST00000623342 TMX2Q9Y320 296 aa9.17□□□□□ -0.94
SND1-IT1-201ENST00000623342 CAPN6Q9Y6Q1 641 aa9.17□□□□□ -0.94
SND1-IT1-201ENST00000623342 IGLV3-22A0A075B6J6 115 aa9.16□□□□□ -0.94
SND1-IT1-201ENST00000623342 TARSL2A2RTX5 802 aaKnown RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms