RNA–Protein interactions for RNA: ENST00000622044.1

PCDHGA11-203, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA11, Length 3,633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-203ENST00000622044 SETDB2Q96T68 719 aa12.45□□□□□ -0.42
PCDHGA11-203ENST00000622044 SNX24Q9Y343 169 aa12.45□□□□□ -0.42
PCDHGA11-203ENST00000622044 LRRN2O75325 713 aa12.45□□□□□ -0.42
PCDHGA11-203ENST00000622044 FAM107AO95990 144 aa12.45□□□□□ -0.42
PCDHGA11-203ENST00000622044 COASYQ13057 564 aa12.45□□□□□ -0.42
PCDHGA11-203ENST00000622044 SUGP1Q8IWZ8 645 aaKnown RBP12.45□□□□□ -0.42
PCDHGA11-203ENST00000622044 HVCN1Q96D96 273 aa12.45□□□□□ -0.42
PCDHGA11-203ENST00000622044 IQCDQ96DY2 449 aa12.45□□□□□ -0.42
PCDHGA11-203ENST00000622044 NUCKS1Q9H1E3 243 aaKnown RBP12.45□□□□□ -0.42
PCDHGA11-203ENST00000622044 MAGEF1Q9HAY2 307 aa12.45□□□□□ -0.42
PCDHGA11-203ENST00000622044 CEP72Q9P209 647 aa12.45□□□□□ -0.42
PCDHGA11-203ENST00000622044 AMFRQ9UKV5 643 aa12.45□□□□□ -0.42
PCDHGA11-203ENST00000622044 PNMA2Q9UL42 364 aa12.45□□□□□ -0.42
PCDHGA11-203ENST00000622044 LMO7Q8WWI1 1683 aa12.45□□□□□ -0.42
PCDHGA11-203ENST00000622044 SFI1A8K8P3 1242 aa12.44□□□□□ -0.42
PCDHGA11-203ENST00000622044 C6orf229H3BNL8 230 aa12.44□□□□□ -0.42
PCDHGA11-203ENST00000622044 STXBP3O00186 592 aa12.44□□□□□ -0.42
PCDHGA11-203ENST00000622044 PCP11498 1178 aaKnown RBP12.44□□□□□ -0.42
PCDHGA11-203ENST00000622044 PPP2R2AP63151 447 aa12.44□□□□□ -0.42
PCDHGA11-203ENST00000622044 KCNH2Q12809 1159 aa12.44□□□□□ -0.42
PCDHGA11-203ENST00000622044 MTMR3Q13615 1198 aa12.44□□□□□ -0.42
PCDHGA11-203ENST00000622044 LRRC14Q15048 493 aa12.44□□□□□ -0.42
PCDHGA11-203ENST00000622044 KDM7AQ6ZMT4 941 aa12.44□□□□□ -0.42
PCDHGA11-203ENST00000622044 PARP9Q8IXQ6 854 aa12.44□□□□□ -0.42
PCDHGA11-203ENST00000622044 CCDC63Q8NA47 563 aa12.44□□□□□ -0.42
PCDHGA11-203ENST00000622044 THOC1Q96FV9 657 aaKnown RBP12.44□□□□□ -0.42
PCDHGA11-203ENST00000622044 FMO2Q99518 471 aa12.44□□□□□ -0.42
PCDHGA11-203ENST00000622044 RNF14Q9UBS8 474 aa12.44□□□□□ -0.42
PCDHGA11-203ENST00000622044 USP17L5A8MUK1 530 aa12.44□□□□□ -0.42
PCDHGA11-203ENST00000622044 ERVV-1B6SEH8 477 aa12.44□□□□□ -0.42
PCDHGA11-203ENST00000622044 KCNQ2O43526 872 aa12.44□□□□□ -0.42
PCDHGA11-203ENST00000622044 SLC9A1P19634 815 aa12.44□□□□□ -0.42
PCDHGA11-203ENST00000622044 FECHP22830 423 aa12.44□□□□□ -0.42
PCDHGA11-203ENST00000622044 GJC1P36383 396 aa12.44□□□□□ -0.42
PCDHGA11-203ENST00000622044 KCNV1Q6PIU1 500 aa12.44□□□□□ -0.42
PCDHGA11-203ENST00000622044 DGKHQ86XP1 1220 aa12.44□□□□□ -0.42
PCDHGA11-203ENST00000622044 SYCP3Q8IZU3 236 aa12.44□□□□□ -0.42
PCDHGA11-203ENST00000622044 RNF10Q8N5U6 811 aaKnown RBP12.44□□□□□ -0.42
PCDHGA11-203ENST00000622044 CCDC197Q8NCU1 140 aa12.44□□□□□ -0.42
PCDHGA11-203ENST00000622044 EMILIN3Q9NT22 766 aa12.44□□□□□ -0.42
PCDHGA11-203ENST00000622044 INTS9Q9NV88 658 aaKnown RBP12.44□□□□□ -0.42
PCDHGA11-203ENST00000622044 SWAP70Q9UH65 585 aa12.44□□□□□ -0.42
PCDHGA11-203ENST00000622044 HDAC9Q9UKV0 1011 aa12.44□□□□□ -0.42
PCDHGA11-203ENST00000622044 POTEB3A0JP26 581 aa12.44□□□□□ -0.42
PCDHGA11-203ENST00000622044 POTECB2RU33 542 aa12.44□□□□□ -0.42
PCDHGA11-203ENST00000622044 LDHCP07864 332 aa12.44□□□□□ -0.42
PCDHGA11-203ENST00000622044 MMEP08473 750 aa12.44□□□□□ -0.42
PCDHGA11-203ENST00000622044 ITGA4P13612 1032 aa12.44□□□□□ -0.42
PCDHGA11-203ENST00000622044 SCP2P22307 547 aa12.44□□□□□ -0.42
PCDHGA11-203ENST00000622044 MYO1EQ12965 1108 aa12.44□□□□□ -0.42
PCDHGA11-203ENST00000622044 POTEBQ6S5H4 581 aa12.44□□□□□ -0.42
PCDHGA11-203ENST00000622044 HOOK3Q86VS8 718 aa12.44□□□□□ -0.42
PCDHGA11-203ENST00000622044 ZNF34Q8IZ26 560 aa12.44□□□□□ -0.42
PCDHGA11-203ENST00000622044 GUF1Q8N442 669 aaKnown RBP12.44□□□□□ -0.42
PCDHGA11-203ENST00000622044 SLC4A9Q96Q91 983 aa12.44□□□□□ -0.42
PCDHGA11-203ENST00000622044 NUDT12Q9BQG2 462 aa12.44□□□□□ -0.42
PCDHGA11-203ENST00000622044 YY1AP1Q9H869 796 aa12.44□□□□□ -0.42
PCDHGA11-203ENST00000622044 CTTNBP2NLQ9P2B4 639 aa12.44□□□□□ -0.42
PCDHGA11-203ENST00000622044 ANAPC4Q9UJX5 808 aa12.44□□□□□ -0.42
PCDHGA11-203ENST00000622044 LOC102724428A0A0B4J2F2 783 aa12.43□□□□□ -0.42
PCDHGA11-203ENST00000622044 CYTH3O43739 400 aa12.43□□□□□ -0.42
PCDHGA11-203ENST00000622044 SHOX2O60902 331 aaPredicted RBP12.43□□□□□ -0.42
PCDHGA11-203ENST00000622044 SIK1P57059 783 aa12.43□□□□□ -0.42
PCDHGA11-203ENST00000622044 ERVK-9P63128 1117 aa12.43□□□□□ -0.42
PCDHGA11-203ENST00000622044 CDC37Q16543 378 aaPredicted RBP12.43□□□□□ -0.42
PCDHGA11-203ENST00000622044 SLC18A3Q16572 532 aa12.43□□□□□ -0.42
PCDHGA11-203ENST00000622044 USP38Q8NB14 1042 aa12.43□□□□□ -0.42
PCDHGA11-203ENST00000622044 SEC16BQ96JE7 1060 aa12.43□□□□□ -0.42
PCDHGA11-203ENST00000622044 C7orf25Q9BPX7 421 aa12.43□□□□□ -0.42
PCDHGA11-203ENST00000622044 C5P01031 1676 aa12.43□□□□□ -0.42
PCDHGA11-203ENST00000622044 A0A1W2PQJ5 194 aa12.43□□□□□ -0.42
PCDHGA11-203ENST00000622044 SLC37A4O43826 429 aa12.43□□□□□ -0.42
PCDHGA11-203ENST00000622044 ORC4O43929 436 aa12.43□□□□□ -0.42
PCDHGA11-203ENST00000622044 RBM5P52756 815 aaKnown RBP eCLIP12.43□□□□□ -0.42
PCDHGA11-203ENST00000622044 PTK2Q05397 1052 aa12.43□□□□□ -0.42
PCDHGA11-203ENST00000622044 USH1GQ495M9 461 aa12.43□□□□□ -0.42
PCDHGA11-203ENST00000622044 CCDC105Q8IYK2 499 aa12.43□□□□□ -0.42
PCDHGA11-203ENST00000622044 CHORDC1Q9UHD1 332 aaPredicted RBP12.43□□□□□ -0.42
PCDHGA11-203ENST00000622044 RASSF10A6NK89 507 aa12.43□□□□□ -0.42
PCDHGA11-203ENST00000622044 OPLAHO14841 1288 aa12.43□□□□□ -0.42
PCDHGA11-203ENST00000622044 SKAP2O75563 359 aaPredicted RBP12.43□□□□□ -0.42
PCDHGA11-203ENST00000622044 EPB41P11171 864 aaKnown RBP12.43□□□□□ -0.42
PCDHGA11-203ENST00000622044 STAT3P40763 770 aa12.43□□□□□ -0.42
PCDHGA11-203ENST00000622044 CYP2J2P51589 502 aa12.43□□□□□ -0.42
PCDHGA11-203ENST00000622044 GRM4Q14833 912 aa12.43□□□□□ -0.42
PCDHGA11-203ENST00000622044 TBC1D10BQ4KMP7 808 aaPredicted RBP12.43□□□□□ -0.42
PCDHGA11-203ENST00000622044 GALNT17Q6IS24 598 aa12.43□□□□□ -0.42
PCDHGA11-203ENST00000622044 CYB5D1Q6P9G0 228 aa12.43□□□□□ -0.42
PCDHGA11-203ENST00000622044 GJB7Q6PEY0 223 aa12.43□□□□□ -0.42
PCDHGA11-203ENST00000622044 ANKS1AQ92625 1134 aa12.43□□□□□ -0.42
PCDHGA11-203ENST00000622044 RAD54LQ92698 747 aa12.43□□□□□ -0.42
PCDHGA11-203ENST00000622044 PSMD1Q99460 953 aa12.43□□□□□ -0.42
PCDHGA11-203ENST00000622044 SH3GL2Q99962 352 aa12.43□□□□□ -0.42
PCDHGA11-203ENST00000622044 NSRP1Q9H0G5 558 aaKnown RBP12.43□□□□□ -0.42
PCDHGA11-203ENST00000622044 RIC8AQ9NPQ8 531 aa12.43□□□□□ -0.42
PCDHGA11-203ENST00000622044 STK17AQ9UEE5 414 aa12.43□□□□□ -0.42
PCDHGA11-203ENST00000622044 RASAL2Q9UJF2 1139 aa12.43□□□□□ -0.42
PCDHGA11-203ENST00000622044 TNFAIP3P21580 790 aa12.42□□□□□ -0.42
PCDHGA11-203ENST00000622044 ELF1P32519 619 aa12.42□□□□□ -0.42
PCDHGA11-203ENST00000622044 STAT1P42224 750 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms