RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 PRR16Q569H4 304 aa10.42□□□□□ -0.74
PDPN-212ENST00000621990 HERC4Q5GLZ8 1057 aaPredicted RBP10.42□□□□□ -0.74
PDPN-212ENST00000621990 ZHX1Q9UKY1 873 aaPredicted RBP10.42□□□□□ -0.74
PDPN-212ENST00000621990 CAPN6Q9Y6Q1 641 aa10.42□□□□□ -0.74
PDPN-212ENST00000621990 MACROD2A1Z1Q3 448 aa10.42□□□□□ -0.74
PDPN-212ENST00000621990 H3BQF6 201 aa10.42□□□□□ -0.74
PDPN-212ENST00000621990 TLR2O60603 784 aa10.42□□□□□ -0.74
PDPN-212ENST00000621990 TACC1O75410 805 aa10.42□□□□□ -0.74
PDPN-212ENST00000621990 BMP3P12645 472 aa10.42□□□□□ -0.74
PDPN-212ENST00000621990 RBM5P52756 815 aaKnown RBP eCLIP10.42□□□□□ -0.74
PDPN-212ENST00000621990 BMT2Q1RMZ1 405 aa10.42□□□□□ -0.74
PDPN-212ENST00000621990 CREG2Q8IUH2 290 aa10.42□□□□□ -0.74
PDPN-212ENST00000621990 TXLNBQ8N3L3 684 aa10.42□□□□□ -0.74
PDPN-212ENST00000621990 CCDC155Q8N6L0 562 aa10.42□□□□□ -0.74
PDPN-212ENST00000621990 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.42□□□□□ -0.74
PDPN-212ENST00000621990 GOLGB1Q14789 3259 aaKnown RBP10.41□□□□□ -0.74
PDPN-212ENST00000621990 SPDYE3A6NKU9 549 aa10.41□□□□□ -0.74
PDPN-212ENST00000621990 PDE2AO00408 941 aaPredicted RBP10.41□□□□□ -0.74
PDPN-212ENST00000621990 MSH4O15457 936 aa10.41□□□□□ -0.74
PDPN-212ENST00000621990 AKR1B10O60218 316 aa10.41□□□□□ -0.74
PDPN-212ENST00000621990 GDF11O95390 407 aa10.41□□□□□ -0.74
PDPN-212ENST00000621990 SERPING1P05155 500 aa10.41□□□□□ -0.74
PDPN-212ENST00000621990 SSBP05455 408 aaKnown RBP eCLIP10.41□□□□□ -0.74
PDPN-212ENST00000621990 RRP1BQ14684 758 aaKnown RBP10.41□□□□□ -0.74
PDPN-212ENST00000621990 CCDC40Q4G0X9 1142 aa10.41□□□□□ -0.74
PDPN-212ENST00000621990 FAM83BQ5T0W9 1011 aa10.41□□□□□ -0.74
PDPN-212ENST00000621990 DPY19L2P1Q6NXN4 242 aa10.41□□□□□ -0.74
PDPN-212ENST00000621990 RNF10Q8N5U6 811 aaKnown RBP10.41□□□□□ -0.74
PDPN-212ENST00000621990 RUBCNQ92622 972 aa10.41□□□□□ -0.74
PDPN-212ENST00000621990 POLR3CQ9BUI4 534 aaPredicted RBP10.41□□□□□ -0.74
PDPN-212ENST00000621990 VIPAS39Q9H9C1 493 aa10.41□□□□□ -0.74
PDPN-212ENST00000621990 DNM3Q9UQ16 869 aa10.41□□□□□ -0.74
PDPN-212ENST00000621990 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.41□□□□□ -0.74
PDPN-212ENST00000621990 A0A1W2PRG0 241 aa10.41□□□□□ -0.74
PDPN-212ENST00000621990 GH2P01242 217 aa10.41□□□□□ -0.74
PDPN-212ENST00000621990 HOXD13P35453 343 aa10.41□□□□□ -0.74
PDPN-212ENST00000621990 CASP8Q14790 479 aa10.41□□□□□ -0.74
PDPN-212ENST00000621990 RBM26Q5T8P6 1007 aaKnown RBP10.41□□□□□ -0.74
PDPN-212ENST00000621990 CC2D2BQ6DHV5 1058 aa10.41□□□□□ -0.74
PDPN-212ENST00000621990 IQCEQ6IPM2 695 aa10.41□□□□□ -0.74
PDPN-212ENST00000621990 CACNA2D4Q7Z3S7 1137 aa10.41□□□□□ -0.74
PDPN-212ENST00000621990 SMCR8Q8TEV9 937 aaPredicted RBP10.41□□□□□ -0.74
PDPN-212ENST00000621990 CNKSR1Q969H4 720 aa10.41□□□□□ -0.74
PDPN-212ENST00000621990 DEF6Q9H4E7 631 aa10.41□□□□□ -0.74
PDPN-212ENST00000621990 AIPL1Q9NZN9 384 aa10.41□□□□□ -0.74
PDPN-212ENST00000621990 TBC1D7Q9P0N9 293 aa10.41□□□□□ -0.74
PDPN-212ENST00000621990 HERC5Q9UII4 1024 aaKnown RBP10.41□□□□□ -0.74
PDPN-212ENST00000621990 IGLV3-22A0A075B6J6 115 aa10.4□□□□□ -0.74
PDPN-212ENST00000621990 RAD21O60216 631 aa10.4□□□□□ -0.74
PDPN-212ENST00000621990 EIF3JO75822 258 aaKnown RBP10.4□□□□□ -0.74
PDPN-212ENST00000621990 APBA3O96018 575 aa10.4□□□□□ -0.74
PDPN-212ENST00000621990 CASP5P51878 434 aa10.4□□□□□ -0.74
PDPN-212ENST00000621990 PSMC6P62333 389 aa10.4□□□□□ -0.74
PDPN-212ENST00000621990 ADAM9Q13443 819 aa10.4□□□□□ -0.74
PDPN-212ENST00000621990 SLC9C1Q4G0N8 1177 aa10.4□□□□□ -0.74
PDPN-212ENST00000621990 FRMD5Q7Z6J6 570 aa10.4□□□□□ -0.74
PDPN-212ENST00000621990 MMGT1Q8N4V1 131 aa10.4□□□□□ -0.74
PDPN-212ENST00000621990 REEP2Q9BRK0 252 aa10.4□□□□□ -0.74
PDPN-212ENST00000621990 TANGO6Q9C0B7 1094 aa10.4□□□□□ -0.74
PDPN-212ENST00000621990 GANQ9H2C0 597 aa10.4□□□□□ -0.74
PDPN-212ENST00000621990 TDRD3Q9H7E2 651 aaKnown RBP10.4□□□□□ -0.74
PDPN-212ENST00000621990 SUGCTQ9HAC7 445 aa10.4□□□□□ -0.74
PDPN-212ENST00000621990 MLXIPQ9HAP2 919 aa10.4□□□□□ -0.74
PDPN-212ENST00000621990 PRR12Q9ULL5 1215 aa10.4□□□□□ -0.74
PDPN-212ENST00000621990 PDXKO00764 312 aa10.4□□□□□ -0.75
PDPN-212ENST00000621990 CETN3O15182 167 aa10.4□□□□□ -0.75
PDPN-212ENST00000621990 ZNF185O15231 689 aa10.4□□□□□ -0.75
PDPN-212ENST00000621990 POLR3GO15318 223 aaPredicted RBP10.4□□□□□ -0.75
PDPN-212ENST00000621990 MAGEA1P43355 309 aa10.4□□□□□ -0.75
PDPN-212ENST00000621990 SNAP25P60880 206 aa10.4□□□□□ -0.75
PDPN-212ENST00000621990 CACNB1Q02641 598 aaPredicted RBP10.4□□□□□ -0.75
PDPN-212ENST00000621990 GFPT1Q06210 699 aaPredicted RBP10.4□□□□□ -0.75
PDPN-212ENST00000621990 TRAF1Q13077 416 aa10.4□□□□□ -0.75
PDPN-212ENST00000621990 GPS2Q13227 327 aa10.4□□□□□ -0.75
PDPN-212ENST00000621990 AOC3Q16853 763 aa10.4□□□□□ -0.75
PDPN-212ENST00000621990 KNOP1Q1ED39 458 aaKnown RBP10.4□□□□□ -0.75
PDPN-212ENST00000621990 USH1GQ495M9 461 aa10.4□□□□□ -0.75
PDPN-212ENST00000621990 SFMBT2Q5VUG0 894 aa10.4□□□□□ -0.75
PDPN-212ENST00000621990 NELFCDQ8IXH7 590 aa10.4□□□□□ -0.75
PDPN-212ENST00000621990 PRMT6Q96LA8 375 aaPredicted RBP10.4□□□□□ -0.75
PDPN-212ENST00000621990 ALS2CR12Q96Q35 445 aa10.4□□□□□ -0.75
PDPN-212ENST00000621990 ZCCHC17Q9NP64 241 aaKnown RBP10.4□□□□□ -0.75
PDPN-212ENST00000621990 PLCB1Q9NQ66 1216 aa10.4□□□□□ -0.75
PDPN-212ENST00000621990 JADE2Q9NQC1 790 aa10.4□□□□□ -0.75
PDPN-212ENST00000621990 PSD3Q9NYI0 1048 aa10.4□□□□□ -0.75
PDPN-212ENST00000621990 SALL4Q9UJQ4 1053 aa10.4□□□□□ -0.75
PDPN-212ENST00000621990 MYH10P35580 1976 aa10.39□□□□□ -0.75
PDPN-212ENST00000621990 MOCS3O95396 460 aa10.39□□□□□ -0.75
PDPN-212ENST00000621990 TCP1P17987 556 aaKnown RBP10.39□□□□□ -0.75
PDPN-212ENST00000621990 AARSP49588 968 aaKnown RBP eCLIP10.39□□□□□ -0.75
PDPN-212ENST00000621990 SLC15A2Q16348 729 aa10.39□□□□□ -0.75
PDPN-212ENST00000621990 MSL1Q68DK7 614 aa10.39□□□□□ -0.75
PDPN-212ENST00000621990 CAPZA3Q96KX2 299 aa10.39□□□□□ -0.75
PDPN-212ENST00000621990 CSRNP1Q96S65 589 aa10.39□□□□□ -0.75
PDPN-212ENST00000621990 LSM14BQ9BX40 385 aaKnown RBP10.39□□□□□ -0.75
PDPN-212ENST00000621990 PDE11AQ9HCR9 933 aa10.39□□□□□ -0.75
PDPN-212ENST00000621990 SMCHD1A6NHR9 2005 aa10.39□□□□□ -0.75
PDPN-212ENST00000621990 YDJCA8MPS7 323 aa10.39□□□□□ -0.75
PDPN-212ENST00000621990 EYA4O95677 639 aa10.39□□□□□ -0.75
PDPN-212ENST00000621990 KRT18P05783 430 aaKnown RBP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms