RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 ANKRD33Q7Z3H0 272 aa16.2■□□□□ 0.18
CBWD3-217ENST00000621474 SEPT1Q8WYJ6 367 aa16.2■□□□□ 0.18
CBWD3-217ENST00000621474 RIT2Q99578 217 aa16.2■□□□□ 0.18
CBWD3-217ENST00000621474 LAMA3Q16787 3333 aa16.2■□□□□ 0.18
CBWD3-217ENST00000621474 MYH15Q9Y2K3 1946 aa16.2■□□□□ 0.18
CBWD3-217ENST00000621474 EMSYQ7Z589 1322 aa16.19■□□□□ 0.18
CBWD3-217ENST00000621474 LGR5O75473 907 aa16.19■□□□□ 0.18
CBWD3-217ENST00000621474 PDCP20941 246 aa16.19■□□□□ 0.18
CBWD3-217ENST00000621474 GNL2Q13823 731 aaKnown RBP16.19■□□□□ 0.18
CBWD3-217ENST00000621474 KIAA0753Q2KHM9 967 aa16.19■□□□□ 0.18
CBWD3-217ENST00000621474 LRCH2Q5VUJ6 765 aa16.19■□□□□ 0.18
CBWD3-217ENST00000621474 MCTP1Q6DN14 999 aa16.19■□□□□ 0.18
CBWD3-217ENST00000621474 FAM126BQ8IXS8 530 aa16.19■□□□□ 0.18
CBWD3-217ENST00000621474 VTI1AQ96AJ9 217 aa16.19■□□□□ 0.18
CBWD3-217ENST00000621474 NAP1L4Q99733 375 aaKnown RBP16.19■□□□□ 0.18
CBWD3-217ENST00000621474 TMEM60Q9H2L4 133 aa16.19■□□□□ 0.18
CBWD3-217ENST00000621474 MTMR6Q9Y217 621 aa16.19■□□□□ 0.18
CBWD3-217ENST00000621474 KAT6AQ92794 2004 aa16.19■□□□□ 0.18
CBWD3-217ENST00000621474 LTBP2Q14767 1821 aa16.19■□□□□ 0.18
CBWD3-217ENST00000621474 H3BRB1 525 aa16.19■□□□□ 0.18
CBWD3-217ENST00000621474 TBX3O15119 743 aa16.19■□□□□ 0.18
CBWD3-217ENST00000621474 GAS7O60861 476 aa16.19■□□□□ 0.18
CBWD3-217ENST00000621474 ATP2B1P20020 1258 aa16.19■□□□□ 0.18
CBWD3-217ENST00000621474 TRAPPC10P48553 1259 aa16.19■□□□□ 0.18
CBWD3-217ENST00000621474 PSEN2P49810 448 aa16.19■□□□□ 0.18
CBWD3-217ENST00000621474 SPIRE1Q08AE8 756 aa16.19■□□□□ 0.18
CBWD3-217ENST00000621474 HIC1Q14526 733 aa16.19■□□□□ 0.18
CBWD3-217ENST00000621474 MFSD10Q14728 455 aa16.19■□□□□ 0.18
CBWD3-217ENST00000621474 UTP14CQ5TAP6 766 aaKnown RBP16.19■□□□□ 0.18
CBWD3-217ENST00000621474 ZNF746Q6NUN9 644 aaPredicted RBP16.19■□□□□ 0.18
CBWD3-217ENST00000621474 NFRKBQ6P4R8 1299 aa16.19■□□□□ 0.18
CBWD3-217ENST00000621474 CCDC60Q8IWA6 550 aaPredicted RBP16.19■□□□□ 0.18
CBWD3-217ENST00000621474 SPRYD3Q8NCJ5 442 aa16.19■□□□□ 0.18
CBWD3-217ENST00000621474 MTMR9Q96QG7 549 aa16.19■□□□□ 0.18
CBWD3-217ENST00000621474 CTAGE1Q96RT6 745 aa16.19■□□□□ 0.18
CBWD3-217ENST00000621474 UNC45AQ9H3U1 944 aa16.19■□□□□ 0.18
CBWD3-217ENST00000621474 TUT1Q9H6E5 874 aaKnown RBP16.19■□□□□ 0.18
CBWD3-217ENST00000621474 VAV3Q9UKW4 847 aa16.19■□□□□ 0.18
CBWD3-217ENST00000621474 ATP11BQ9Y2G3 1177 aa16.19■□□□□ 0.18
CBWD3-217ENST00000621474 PCDHB6Q9Y5E3 794 aa16.19■□□□□ 0.18
CBWD3-217ENST00000621474 VPS37CA5D8V6 355 aaPredicted RBP16.18■□□□□ 0.18
CBWD3-217ENST00000621474 B4GALT4O60513 344 aa16.18■□□□□ 0.18
CBWD3-217ENST00000621474 NEMFO60524 1076 aa16.18■□□□□ 0.18
CBWD3-217ENST00000621474 PQBP1O60828 265 aaKnown RBP16.18■□□□□ 0.18
CBWD3-217ENST00000621474 CD4P01730 458 aa16.18■□□□□ 0.18
CBWD3-217ENST00000621474 MCM7P33993 719 aa16.18■□□□□ 0.18
CBWD3-217ENST00000621474 KRT76Q01546 638 aa16.18■□□□□ 0.18
CBWD3-217ENST00000621474 TLE2Q04725 743 aa16.18■□□□□ 0.18
CBWD3-217ENST00000621474 FAAP100Q0VG06 881 aa16.18■□□□□ 0.18
CBWD3-217ENST00000621474 TTC38Q5R3I4 469 aa16.18■□□□□ 0.18
CBWD3-217ENST00000621474 SESTD1Q86VW0 696 aa16.18■□□□□ 0.18
CBWD3-217ENST00000621474 DPF3Q92784 378 aa16.18■□□□□ 0.18
CBWD3-217ENST00000621474 FAM20AQ96MK3 541 aa16.18■□□□□ 0.18
CBWD3-217ENST00000621474 TOX2Q96NM4 488 aa16.18■□□□□ 0.18
CBWD3-217ENST00000621474 RNPEPQ9H4A4 650 aa16.18■□□□□ 0.18
CBWD3-217ENST00000621474 STX6O43752 255 aa16.17■□□□□ 0.18
CBWD3-217ENST00000621474 EVI5O60447 810 aa16.17■□□□□ 0.18
CBWD3-217ENST00000621474 SUPT20HL2P0C7V6 817 aa16.17■□□□□ 0.18
CBWD3-217ENST00000621474 HOXC8P31273 242 aa16.17■□□□□ 0.18
CBWD3-217ENST00000621474 PPP2R5CQ13362 524 aa16.17■□□□□ 0.18
CBWD3-217ENST00000621474 ZNF174Q15697 407 aa16.17■□□□□ 0.18
CBWD3-217ENST00000621474 FERMT3Q86UX7 667 aa16.17■□□□□ 0.18
CBWD3-217ENST00000621474 SMAP1Q8IYB5 467 aaPredicted RBP16.17■□□□□ 0.18
CBWD3-217ENST00000621474 C7orf61Q8IZ16 206 aa16.17■□□□□ 0.18
CBWD3-217ENST00000621474 C4orf32Q8N8J7 132 aa16.17■□□□□ 0.18
CBWD3-217ENST00000621474 KATNAL1Q9BW62 490 aa16.17■□□□□ 0.18
CBWD3-217ENST00000621474 TEKT3Q9BXF9 490 aa16.17■□□□□ 0.18
CBWD3-217ENST00000621474 PDLIM7Q9NR12 457 aa16.17■□□□□ 0.18
CBWD3-217ENST00000621474 HDAC6Q9UBN7 1215 aa16.17■□□□□ 0.18
CBWD3-217ENST00000621474 MROH7Q68CQ1 1323 aa16.16■□□□□ 0.18
CBWD3-217ENST00000621474 EML1O00423 815 aa16.16■□□□□ 0.18
CBWD3-217ENST00000621474 ATP4AP20648 1035 aa16.16■□□□□ 0.18
CBWD3-217ENST00000621474 RESTQ13127 1097 aa16.16■□□□□ 0.18
CBWD3-217ENST00000621474 PKP1Q13835 747 aa16.16■□□□□ 0.18
CBWD3-217ENST00000621474 SH3RF1Q7Z6J0 888 aa16.16■□□□□ 0.18
CBWD3-217ENST00000621474 AFAP1L1Q8TED9 768 aa16.16■□□□□ 0.18
CBWD3-217ENST00000621474 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.16■□□□□ 0.18
CBWD3-217ENST00000621474 TRMT13Q9NUP7 481 aaKnown RBP16.16■□□□□ 0.18
CBWD3-217ENST00000621474 GTF2IRD1Q9UHL9 959 aa16.16■□□□□ 0.18
CBWD3-217ENST00000621474 PCDHA10Q9Y5I2 948 aa16.16■□□□□ 0.18
CBWD3-217ENST00000621474 IGSF9BQ9UPX0 1349 aa16.16■□□□□ 0.18
CBWD3-217ENST00000621474 WDR64B1ANS9 1081 aa16.16■□□□□ 0.18
CBWD3-217ENST00000621474 CHMP2AO43633 222 aa16.16■□□□□ 0.18
CBWD3-217ENST00000621474 HSP90AA1P07900 732 aaKnown RBP16.16■□□□□ 0.18
CBWD3-217ENST00000621474 ITGB8P26012 769 aa16.16■□□□□ 0.18
CBWD3-217ENST00000621474 CHMP4BP1P59074 171 aa16.16■□□□□ 0.18
CBWD3-217ENST00000621474 ORC2Q13416 577 aaPredicted RBP16.16■□□□□ 0.18
CBWD3-217ENST00000621474 CALCRLQ16602 461 aa16.16■□□□□ 0.18
CBWD3-217ENST00000621474 RILPL1Q5EBL4 403 aa16.16■□□□□ 0.18
CBWD3-217ENST00000621474 GDF6Q6KF10 455 aaPredicted RBP16.16■□□□□ 0.18
CBWD3-217ENST00000621474 SEZ6LQ9BYH1 1024 aa16.16■□□□□ 0.18
CBWD3-217ENST00000621474 TRPV6Q9H1D0 765 aa16.16■□□□□ 0.18
CBWD3-217ENST00000621474 SMARCAD1Q9H4L7 1026 aa16.16■□□□□ 0.18
CBWD3-217ENST00000621474 DISC1Q9NRI5 854 aa16.16■□□□□ 0.18
CBWD3-217ENST00000621474 TRIM43BA6NCK2 446 aa16.15■□□□□ 0.18
CBWD3-217ENST00000621474 SMIM10L2AP0DMW4 78 aa16.15■□□□□ 0.18
CBWD3-217ENST00000621474 SMIM10L2BP0DMW5 78 aa16.15■□□□□ 0.18
CBWD3-217ENST00000621474 MARK3P27448 753 aa16.15■□□□□ 0.18
CBWD3-217ENST00000621474 STAT5BP51692 787 aa16.15■□□□□ 0.18
CBWD3-217ENST00000621474 PTPN11Q06124 597 aaPredicted RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms