RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 ARVCFO00192 962 aa20.99■□□□□ 0.95
CIRBP-245ENST00000621399 PSMD10O75832 226 aa20.99■□□□□ 0.95
CIRBP-245ENST00000621399 F2P00734 622 aa20.99■□□□□ 0.95
CIRBP-245ENST00000621399 CALCRLQ16602 461 aa20.99■□□□□ 0.95
CIRBP-245ENST00000621399 RILPL1Q5EBL4 403 aa20.99■□□□□ 0.95
CIRBP-245ENST00000621399 C1orf53Q5VUE5 145 aa20.99■□□□□ 0.95
CIRBP-245ENST00000621399 ZNF746Q6NUN9 644 aaPredicted RBP20.99■□□□□ 0.95
CIRBP-245ENST00000621399 FERMT3Q86UX7 667 aa20.99■□□□□ 0.95
CIRBP-245ENST00000621399 SLFN12Q8IYM2 578 aa20.99■□□□□ 0.95
CIRBP-245ENST00000621399 KATNAL1Q9BW62 490 aa20.99■□□□□ 0.95
CIRBP-245ENST00000621399 MTMR6Q9Y217 621 aa20.99■□□□□ 0.95
CIRBP-245ENST00000621399 ATP11BQ9Y2G3 1177 aa20.99■□□□□ 0.95
CIRBP-245ENST00000621399 GRIN2DO15399 1336 aa20.99■□□□□ 0.95
CIRBP-245ENST00000621399 H3BRB1 525 aa20.98■□□□□ 0.95
CIRBP-245ENST00000621399 CHMP2AO43633 222 aa20.98■□□□□ 0.95
CIRBP-245ENST00000621399 EVI5O60447 810 aa20.98■□□□□ 0.95
CIRBP-245ENST00000621399 PSEN2P49810 448 aa20.98■□□□□ 0.95
CIRBP-245ENST00000621399 TOB1P50616 345 aaPredicted RBP20.98■□□□□ 0.95
CIRBP-245ENST00000621399 RTP1P59025 263 aa20.98■□□□□ 0.95
CIRBP-245ENST00000621399 ORC2Q13416 577 aaPredicted RBP20.98■□□□□ 0.95
CIRBP-245ENST00000621399 NBR1Q14596 966 aa20.98■□□□□ 0.95
CIRBP-245ENST00000621399 MFSD10Q14728 455 aa20.98■□□□□ 0.95
CIRBP-245ENST00000621399 SNX17Q15036 470 aa20.98■□□□□ 0.95
CIRBP-245ENST00000621399 NBPF20Q3BBV1 942 aa20.98■□□□□ 0.95
CIRBP-245ENST00000621399 TRIM60Q495X7 471 aa20.98■□□□□ 0.95
CIRBP-245ENST00000621399 MIS18BP1Q6P0N0 1132 aa20.98■□□□□ 0.95
CIRBP-245ENST00000621399 BRAPQ7Z569 592 aa20.98■□□□□ 0.95
CIRBP-245ENST00000621399 TRIM50Q86XT4 487 aa20.98■□□□□ 0.95
CIRBP-245ENST00000621399 HAS1Q92839 578 aa20.98■□□□□ 0.95
CIRBP-245ENST00000621399 GLG1Q92896 1179 aa20.98■□□□□ 0.95
CIRBP-245ENST00000621399 SEZ6LQ9BYH1 1024 aa20.98■□□□□ 0.95
CIRBP-245ENST00000621399 TUT1Q9H6E5 874 aaKnown RBP20.98■□□□□ 0.95
CIRBP-245ENST00000621399 AZI2Q9H6S1 392 aa20.98■□□□□ 0.95
CIRBP-245ENST00000621399 ZNF215Q9UL58 517 aaPredicted RBP20.98■□□□□ 0.95
CIRBP-245ENST00000621399 SAMM50Q9Y512 469 aa20.98■□□□□ 0.95
CIRBP-245ENST00000621399 PQBP1O60828 265 aaKnown RBP20.97■□□□□ 0.95
CIRBP-245ENST00000621399 ATG7O95352 703 aa20.97■□□□□ 0.95
CIRBP-245ENST00000621399 CDK7P50613 346 aa20.97■□□□□ 0.95
CIRBP-245ENST00000621399 KIAA0753Q2KHM9 967 aa20.97■□□□□ 0.95
CIRBP-245ENST00000621399 FAM47CQ5HY64 1035 aa20.97■□□□□ 0.95
CIRBP-245ENST00000621399 ABHD15Q6UXT9 468 aa20.97■□□□□ 0.95
CIRBP-245ENST00000621399 SMAP1Q8IYB5 467 aaPredicted RBP20.97■□□□□ 0.95
CIRBP-245ENST00000621399 SLC43A3Q8NBI5 491 aa20.97■□□□□ 0.95
CIRBP-245ENST00000621399 PPP1R13LQ8WUF5 828 aa20.97■□□□□ 0.95
CIRBP-245ENST00000621399 UNC45AQ9H3U1 944 aa20.97■□□□□ 0.95
CIRBP-245ENST00000621399 SMARCAD1Q9H4L7 1026 aa20.97■□□□□ 0.95
CIRBP-245ENST00000621399 WDR64B1ANS9 1081 aa20.96■□□□□ 0.95
CIRBP-245ENST00000621399 HAS3O00219 553 aa20.96■□□□□ 0.95
CIRBP-245ENST00000621399 BACH1O14867 736 aa20.96■□□□□ 0.95
CIRBP-245ENST00000621399 PSAPP07602 524 aa20.96■□□□□ 0.95
CIRBP-245ENST00000621399 SUPT20HL2P0C7V6 817 aa20.96■□□□□ 0.95
CIRBP-245ENST00000621399 PDIA4P13667 645 aaKnown RBP20.96■□□□□ 0.95
CIRBP-245ENST00000621399 JAK3P52333 1124 aa20.96■□□□□ 0.95
CIRBP-245ENST00000621399 TLE2Q04725 743 aa20.96■□□□□ 0.95
CIRBP-245ENST00000621399 NFRKBQ6P4R8 1299 aa20.96■□□□□ 0.95
CIRBP-245ENST00000621399 C7orf31Q8N865 590 aa20.96■□□□□ 0.95
CIRBP-245ENST00000621399 DISC1Q9NRI5 854 aa20.96■□□□□ 0.95
CIRBP-245ENST00000621399 PCDHB6Q9Y5E3 794 aa20.96■□□□□ 0.95
CIRBP-245ENST00000621399 PCDHA10Q9Y5I2 948 aa20.96■□□□□ 0.95
CIRBP-245ENST00000621399 LGR5O75473 907 aa20.95■□□□□ 0.94
CIRBP-245ENST00000621399 SFNP31947 248 aa20.95■□□□□ 0.94
CIRBP-245ENST00000621399 TXKP42681 527 aa20.95■□□□□ 0.94
CIRBP-245ENST00000621399 STAT5BP51692 787 aa20.95■□□□□ 0.94
CIRBP-245ENST00000621399 FAM160B1Q5W0V3 765 aa20.95■□□□□ 0.94
CIRBP-245ENST00000621399 SWSAP1Q6NVH7 229 aa20.95■□□□□ 0.94
CIRBP-245ENST00000621399 ANKRD33Q7Z3H0 272 aa20.95■□□□□ 0.94
CIRBP-245ENST00000621399 MIER3Q7Z3K6 550 aa20.95■□□□□ 0.94
CIRBP-245ENST00000621399 C7orf61Q8IZ16 206 aa20.95■□□□□ 0.94
CIRBP-245ENST00000621399 MTMR9Q96QG7 549 aa20.95■□□□□ 0.94
CIRBP-245ENST00000621399 PCYT2Q99447 389 aa20.95■□□□□ 0.94
CIRBP-245ENST00000621399 TMEM60Q9H2L4 133 aa20.95■□□□□ 0.94
CIRBP-245ENST00000621399 ERAP1Q9NZ08 941 aa20.95■□□□□ 0.94
CIRBP-245ENST00000621399 PCDHA12Q9UN75 941 aa20.95■□□□□ 0.94
CIRBP-245ENST00000621399 MROH7Q68CQ1 1323 aa20.95■□□□□ 0.94
CIRBP-245ENST00000621399 EMSYQ7Z589 1322 aa20.95■□□□□ 0.94
CIRBP-245ENST00000621399 DNAH12Q6ZR08 3092 aa20.95■□□□□ 0.94
CIRBP-245ENST00000621399 IGKV6D-21A0A0A0MT36 114 aa20.94■□□□□ 0.94
CIRBP-245ENST00000621399 DCDC2CA8MYV0 355 aa20.94■□□□□ 0.94
CIRBP-245ENST00000621399 MARK3P27448 753 aa20.94■□□□□ 0.94
CIRBP-245ENST00000621399 PTPN11Q06124 597 aaPredicted RBP20.94■□□□□ 0.94
CIRBP-245ENST00000621399 RESTQ13127 1097 aa20.94■□□□□ 0.94
CIRBP-245ENST00000621399 B3GNT9Q6UX72 402 aa20.94■□□□□ 0.94
CIRBP-245ENST00000621399 PLPPR4Q7Z2D5 763 aa20.94■□□□□ 0.94
CIRBP-245ENST00000621399 TOX2Q96NM4 488 aa20.94■□□□□ 0.94
CIRBP-245ENST00000621399 TTC12Q9H892 705 aaPredicted RBP20.94■□□□□ 0.94
CIRBP-245ENST00000621399 ZNF302Q9NR11 478 aa20.94■□□□□ 0.94
CIRBP-245ENST00000621399 VAV3Q9UKW4 847 aa20.94■□□□□ 0.94
CIRBP-245ENST00000621399 DOCK5Q9H7D0 1870 aa20.94■□□□□ 0.94
CIRBP-245ENST00000621399 TLR3O15455 904 aaKnown RBP20.93■□□□□ 0.94
CIRBP-245ENST00000621399 OR52Z1P0C646 297 aa20.93■□□□□ 0.94
CIRBP-245ENST00000621399 PTGDRQ13258 359 aa20.93■□□□□ 0.94
CIRBP-245ENST00000621399 PPP2R5CQ13362 524 aa20.93■□□□□ 0.94
CIRBP-245ENST00000621399 CCDC60Q8IWA6 550 aaPredicted RBP20.93■□□□□ 0.94
CIRBP-245ENST00000621399 FAM126BQ8IXS8 530 aa20.93■□□□□ 0.94
CIRBP-245ENST00000621399 RDM1Q8NG50 284 aa20.93■□□□□ 0.94
CIRBP-245ENST00000621399 RNPEPQ9H4A4 650 aa20.93■□□□□ 0.94
CIRBP-245ENST00000621399 ZSCAN16Q9H4T2 348 aaPredicted RBP20.93■□□□□ 0.94
CIRBP-245ENST00000621399 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.93■□□□□ 0.94
CIRBP-245ENST00000621399 HDAC6Q9UBN7 1215 aa20.93■□□□□ 0.94
CIRBP-245ENST00000621399 NR2E3Q9Y5X4 410 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms