RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 MYBL2P10244 700 aa5.43□□□□□ -1.54
VPS13D-214ENST00000620676 TSHZ1Q6ZSZ6 1077 aa5.43□□□□□ -1.54
VPS13D-214ENST00000620676 ZNF444Q8N0Y2 327 aaPredicted RBP5.43□□□□□ -1.54
VPS13D-214ENST00000620676 EZH1Q92800 747 aaPredicted RBP5.43□□□□□ -1.54
VPS13D-214ENST00000620676 TBATAQ96M53 351 aa5.43□□□□□ -1.54
VPS13D-214ENST00000620676 L2HGDHQ9H9P8 463 aa5.43□□□□□ -1.54
VPS13D-214ENST00000620676 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.43□□□□□ -1.54
VPS13D-214ENST00000620676 TDRKHQ9Y2W6 561 aaKnown RBP5.43□□□□□ -1.54
VPS13D-214ENST00000620676 ABCC4O15439 1325 aa5.43□□□□□ -1.54
VPS13D-214ENST00000620676 MAGEB6P1A0A0J9YX57 407 aa5.43□□□□□ -1.54
VPS13D-214ENST00000620676 HSPD1P10809 573 aaKnown RBP5.43□□□□□ -1.54
VPS13D-214ENST00000620676 DRP2Q13474 957 aa5.43□□□□□ -1.54
VPS13D-214ENST00000620676 ANKRD20A4Q4UJ75 823 aa5.43□□□□□ -1.54
VPS13D-214ENST00000620676 ANKRD20A2Q5SQ80 823 aa5.43□□□□□ -1.54
VPS13D-214ENST00000620676 ANKRD20A1Q5TYW2 823 aa5.43□□□□□ -1.54
VPS13D-214ENST00000620676 ZBTB46Q86UZ6 589 aa5.43□□□□□ -1.54
VPS13D-214ENST00000620676 SESTD1Q86VW0 696 aa5.43□□□□□ -1.54
VPS13D-214ENST00000620676 ERP27Q96DN0 273 aa5.43□□□□□ -1.54
VPS13D-214ENST00000620676 RAB34Q9BZG1 259 aa5.43□□□□□ -1.54
VPS13D-214ENST00000620676 IL25Q9H293 177 aa5.43□□□□□ -1.54
VPS13D-214ENST00000620676 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.43□□□□□ -1.54
VPS13D-214ENST00000620676 A0A0G2JLW4 131 aa5.43□□□□□ -1.54
VPS13D-214ENST00000620676 IKBKBO14920 756 aa5.43□□□□□ -1.54
VPS13D-214ENST00000620676 MRPS15P82914 257 aaKnown RBP5.43□□□□□ -1.54
VPS13D-214ENST00000620676 KSR2Q6VAB6 950 aa5.43□□□□□ -1.54
VPS13D-214ENST00000620676 ANKRD13DQ6ZTN6 518 aa5.43□□□□□ -1.54
VPS13D-214ENST00000620676 ERMNQ8TAM6 284 aa5.43□□□□□ -1.54
VPS13D-214ENST00000620676 CASP10Q92851 521 aa5.43□□□□□ -1.54
VPS13D-214ENST00000620676 TTC17Q96AE7 1141 aa5.43□□□□□ -1.54
VPS13D-214ENST00000620676 SAYSD1Q9NPB0 183 aa5.43□□□□□ -1.54
VPS13D-214ENST00000620676 BATF3Q9NR55 127 aa5.43□□□□□ -1.54
VPS13D-214ENST00000620676 KRT82Q9NSB4 513 aa5.43□□□□□ -1.54
VPS13D-214ENST00000620676 AGPAT5Q9NUQ2 364 aa5.43□□□□□ -1.54
VPS13D-214ENST00000620676 STOML1Q9UBI4 398 aa5.43□□□□□ -1.54
VPS13D-214ENST00000620676 ANGEL1Q9UNK9 670 aaKnown RBP5.43□□□□□ -1.54
VPS13D-214ENST00000620676 SATB2Q9UPW6 733 aa5.43□□□□□ -1.54
VPS13D-214ENST00000620676 PLEKP08567 350 aaPredicted RBP5.43□□□□□ -1.54
VPS13D-214ENST00000620676 GALK1P51570 392 aa5.43□□□□□ -1.54
VPS13D-214ENST00000620676 PSMD7P51665 324 aa5.43□□□□□ -1.54
VPS13D-214ENST00000620676 TRADDQ15628 312 aa5.43□□□□□ -1.54
VPS13D-214ENST00000620676 RNF19BQ6ZMZ0 732 aa5.43□□□□□ -1.54
VPS13D-214ENST00000620676 CABP7Q86V35 215 aa5.43□□□□□ -1.54
VPS13D-214ENST00000620676 EPS8L3Q8TE67 593 aaKnown RBP5.43□□□□□ -1.54
VPS13D-214ENST00000620676 AK9Q5TCS8 1911 aa5.43□□□□□ -1.54
VPS13D-214ENST00000620676 BASP1P80723 227 aaKnown RBP5.43□□□□□ -1.54
VPS13D-214ENST00000620676 ENAHQ8N8S7 591 aaPredicted RBP5.43□□□□□ -1.54
VPS13D-214ENST00000620676 NEK9Q8TD19 979 aa5.43□□□□□ -1.54
VPS13D-214ENST00000620676 TTC7AQ9ULT0 858 aaPredicted RBP5.43□□□□□ -1.54
VPS13D-214ENST00000620676 PASKQ96RG2 1323 aa5.43□□□□□ -1.54
VPS13D-214ENST00000620676 DNM2P50570 870 aa5.43□□□□□ -1.54
VPS13D-214ENST00000620676 STRN3Q13033 797 aa5.43□□□□□ -1.54
VPS13D-214ENST00000620676 BIRC3Q13489 604 aa5.43□□□□□ -1.54
VPS13D-214ENST00000620676 SLC12A1Q13621 1099 aa5.43□□□□□ -1.54
VPS13D-214ENST00000620676 CWF19L1Q69YN2 538 aaKnown RBP5.43□□□□□ -1.54
VPS13D-214ENST00000620676 LRRC8BQ6P9F7 803 aa5.43□□□□□ -1.54
VPS13D-214ENST00000620676 NOP9Q86U38 636 aaKnown RBP5.43□□□□□ -1.54
VPS13D-214ENST00000620676 ERICH1Q86X53 443 aa5.43□□□□□ -1.54
VPS13D-214ENST00000620676 KANSL2Q9H9L4 492 aa5.43□□□□□ -1.54
VPS13D-214ENST00000620676 ANKIB1Q9P2G1 1089 aa5.43□□□□□ -1.54
VPS13D-214ENST00000620676 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.43□□□□□ -1.54
VPS13D-214ENST00000620676 NBPF26B4DH59 902 aa5.43□□□□□ -1.54
VPS13D-214ENST00000620676 SGK1O00141 431 aa5.43□□□□□ -1.54
VPS13D-214ENST00000620676 RAD51CO43502 376 aa5.43□□□□□ -1.54
VPS13D-214ENST00000620676 LMNB1P20700 586 aa5.43□□□□□ -1.54
VPS13D-214ENST00000620676 NBPF15Q8N660 670 aa5.43□□□□□ -1.54
VPS13D-214ENST00000620676 SCG3Q8WXD2 468 aaKnown RBP5.43□□□□□ -1.54
VPS13D-214ENST00000620676 CCDC138Q96M89 665 aa5.43□□□□□ -1.54
VPS13D-214ENST00000620676 RNF41Q9H4P4 317 aaPredicted RBP5.43□□□□□ -1.54
VPS13D-214ENST00000620676 TBC1D23Q9NUY8 699 aa5.43□□□□□ -1.54
VPS13D-214ENST00000620676 WARS2Q9UGM6 360 aaKnown RBP5.43□□□□□ -1.54
VPS13D-214ENST00000620676 ZNF148Q9UQR1 794 aa5.43□□□□□ -1.54
VPS13D-214ENST00000620676 FAM107AO95990 144 aa5.43□□□□□ -1.54
VPS13D-214ENST00000620676 LDHAP00338 332 aaKnown RBP5.43□□□□□ -1.54
VPS13D-214ENST00000620676 NEK2P51955 445 aa5.43□□□□□ -1.54
VPS13D-214ENST00000620676 ADARP55265 1226 aaKnown RBP5.43□□□□□ -1.54
VPS13D-214ENST00000620676 ZBTB41Q5SVQ8 909 aa5.43□□□□□ -1.54
VPS13D-214ENST00000620676 IL31Q6EBC2 164 aa5.43□□□□□ -1.54
VPS13D-214ENST00000620676 RSAD2Q8WXG1 361 aa5.43□□□□□ -1.54
VPS13D-214ENST00000620676 THTPAQ9BU02 230 aa5.43□□□□□ -1.54
VPS13D-214ENST00000620676 TRIM39Q9HCM9 518 aa5.43□□□□□ -1.54
VPS13D-214ENST00000620676 TTI1O43156 1089 aa5.43□□□□□ -1.54
VPS13D-214ENST00000620676 RCSD1Q6JBY9 416 aa5.43□□□□□ -1.54
VPS13D-214ENST00000620676 ESR2Q92731 530 aa5.43□□□□□ -1.54
VPS13D-214ENST00000620676 DDX39AO00148 427 aaKnown RBP5.43□□□□□ -1.54
VPS13D-214ENST00000620676 KIF23Q02241 960 aaPredicted RBP5.43□□□□□ -1.54
VPS13D-214ENST00000620676 IYDQ6PHW0 289 aa5.43□□□□□ -1.54
VPS13D-214ENST00000620676 EFCAB3Q8N7B9 438 aa5.43□□□□□ -1.54
VPS13D-214ENST00000620676 SPIRE2Q8WWL2 714 aa5.43□□□□□ -1.54
VPS13D-214ENST00000620676 CCT6BQ92526 530 aa5.43□□□□□ -1.54
VPS13D-214ENST00000620676 PHF12Q96QT6 1004 aa5.43□□□□□ -1.54
VPS13D-214ENST00000620676 ARL2BPQ9Y2Y0 163 aa5.43□□□□□ -1.54
VPS13D-214ENST00000620676 ZCWPW2Q504Y3 356 aa5.43□□□□□ -1.54
VPS13D-214ENST00000620676 C4orf33Q8N1A6 199 aa5.43□□□□□ -1.54
VPS13D-214ENST00000620676 GLG1Q92896 1179 aa5.43□□□□□ -1.54
VPS13D-214ENST00000620676 SPC25Q9HBM1 224 aa5.43□□□□□ -1.54
VPS13D-214ENST00000620676 RTEL1-TNFRSF6BF6WH68 1400 aa5.43□□□□□ -1.54
VPS13D-214ENST00000620676 PI4K2BG5E9Z4 385 aa5.43□□□□□ -1.54
VPS13D-214ENST00000620676 ADORA1P30542 326 aa5.43□□□□□ -1.54
VPS13D-214ENST00000620676 C16orf72Q14CZ0 275 aa5.43□□□□□ -1.54
VPS13D-214ENST00000620676 CNGA3Q16281 694 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms