RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 FAM20AQ96MK3 541 aa15.39■□□□□ 0.05
NEK3-210ENST00000620675 RIT2Q99578 217 aa15.39■□□□□ 0.05
NEK3-210ENST00000620675 TEKT3Q9BXF9 490 aa15.39■□□□□ 0.05
NEK3-210ENST00000620675 TBC1D22BQ9NU19 505 aa15.39■□□□□ 0.05
NEK3-210ENST00000620675 Q9Y3F1 56 aa15.39■□□□□ 0.05
NEK3-210ENST00000620675 ALPK3Q96L96 1907 aa15.39■□□□□ 0.05
NEK3-210ENST00000620675 TNRC18O15417 2968 aaPredicted RBP15.39■□□□□ 0.05
NEK3-210ENST00000620675 PP2D1A8MPX8 630 aa15.39■□□□□ 0.05
NEK3-210ENST00000620675 RBAK-RBAKDNI3L0D1 243 aa15.39■□□□□ 0.05
NEK3-210ENST00000620675 MARCH6O60337 910 aa15.39■□□□□ 0.05
NEK3-210ENST00000620675 TFRCP02786 760 aaKnown RBP15.39■□□□□ 0.05
NEK3-210ENST00000620675 TCF7P36402 384 aaPredicted RBP15.39■□□□□ 0.05
NEK3-210ENST00000620675 NASPP49321 788 aaPredicted RBP15.39■□□□□ 0.05
NEK3-210ENST00000620675 SOX10P56693 466 aa15.39■□□□□ 0.05
NEK3-210ENST00000620675 CXCL17Q6UXB2 119 aa15.39■□□□□ 0.05
NEK3-210ENST00000620675 LINC00301Q8NCQ3 95 aa15.39■□□□□ 0.05
NEK3-210ENST00000620675 CLIC6Q96NY7 704 aa15.39■□□□□ 0.05
NEK3-210ENST00000620675 PCDHA12Q9UN75 941 aa15.39■□□□□ 0.05
NEK3-210ENST00000620675 ASGR1P07306 291 aa15.38■□□□□ 0.05
NEK3-210ENST00000620675 NKX3-2P78367 333 aa15.38■□□□□ 0.05
NEK3-210ENST00000620675 ORC2Q13416 577 aaPredicted RBP15.38■□□□□ 0.05
NEK3-210ENST00000620675 UGCGQ16739 394 aa15.38■□□□□ 0.05
NEK3-210ENST00000620675 UTP14CQ5TAP6 766 aaKnown RBP15.38■□□□□ 0.05
NEK3-210ENST00000620675 NCAPH2Q6IBW4 605 aa15.38■□□□□ 0.05
NEK3-210ENST00000620675 ABHD15Q6UXT9 468 aa15.38■□□□□ 0.05
NEK3-210ENST00000620675 CCDC60Q8IWA6 550 aaPredicted RBP15.38■□□□□ 0.05
NEK3-210ENST00000620675 SLFN12Q8IYM2 578 aa15.38■□□□□ 0.05
NEK3-210ENST00000620675 TNPO1Q92973 898 aaKnown RBP15.38■□□□□ 0.05
NEK3-210ENST00000620675 FERMT2Q96AC1 680 aa15.38■□□□□ 0.05
NEK3-210ENST00000620675 POLR3EQ9NVU0 708 aa15.38■□□□□ 0.05
NEK3-210ENST00000620675 ELP1O95163 1332 aa15.38■□□□□ 0.05
NEK3-210ENST00000620675 VWA3AA6NCI4 1184 aa15.37■□□□□ 0.05
NEK3-210ENST00000620675 NOP56O00567 594 aaKnown RBP15.37■□□□□ 0.05
NEK3-210ENST00000620675 MYL3P08590 195 aa15.37■□□□□ 0.05
NEK3-210ENST00000620675 NCLP19338 710 aaKnown RBP15.37■□□□□ 0.05
NEK3-210ENST00000620675 PPP2R5CQ13362 524 aa15.37■□□□□ 0.05
NEK3-210ENST00000620675 SLC39A14Q15043 492 aa15.37■□□□□ 0.05
NEK3-210ENST00000620675 SPECC1Q5M775 1068 aa15.37■□□□□ 0.05
NEK3-210ENST00000620675 GIMAP8Q8ND71 665 aaPredicted RBP15.37■□□□□ 0.05
NEK3-210ENST00000620675 KAT2BQ92831 832 aa15.37■□□□□ 0.05
NEK3-210ENST00000620675 ZNF396Q96N95 335 aaPredicted RBP15.37■□□□□ 0.05
NEK3-210ENST00000620675 TMEM106CQ9BVX2 250 aa15.37■□□□□ 0.05
NEK3-210ENST00000620675 ATG7O95352 703 aa15.37■□□□□ 0.05
NEK3-210ENST00000620675 BAG4O95429 457 aaKnown RBP15.37■□□□□ 0.05
NEK3-210ENST00000620675 LGALS2P05162 132 aa15.37■□□□□ 0.05
NEK3-210ENST00000620675 HOXD8P13378 290 aaPredicted RBP15.37■□□□□ 0.05
NEK3-210ENST00000620675 PSMC6P62333 389 aa15.37■□□□□ 0.05
NEK3-210ENST00000620675 PURAQ00577 322 aaKnown RBP15.37■□□□□ 0.05
NEK3-210ENST00000620675 ZNF746Q6NUN9 644 aaPredicted RBP15.37■□□□□ 0.05
NEK3-210ENST00000620675 USP49Q70CQ1 688 aa15.37■□□□□ 0.05
NEK3-210ENST00000620675 TRMT1LQ7Z2T5 733 aaKnown RBP15.37■□□□□ 0.05
NEK3-210ENST00000620675 SEPT1Q8WYJ6 367 aa15.37■□□□□ 0.05
NEK3-210ENST00000620675 C16orf70Q9BSU1 422 aa15.37■□□□□ 0.05
NEK3-210ENST00000620675 DISC1Q9NRI5 854 aa15.37■□□□□ 0.05
NEK3-210ENST00000620675 RGL1Q9NZL6 768 aa15.37■□□□□ 0.05
NEK3-210ENST00000620675 WRAP73Q9P2S5 460 aaPredicted RBP15.37■□□□□ 0.05
NEK3-210ENST00000620675 FBXO2Q9UK22 296 aaPredicted RBP15.37■□□□□ 0.05
NEK3-210ENST00000620675 SAMM50Q9Y512 469 aa15.37■□□□□ 0.05
NEK3-210ENST00000620675 A0A087WWV3 80 aa15.36■□□□□ 0.05
NEK3-210ENST00000620675 CCDC85CA6NKD9 419 aa15.36■□□□□ 0.05
NEK3-210ENST00000620675 CST5P28325 142 aaPredicted RBP15.36■□□□□ 0.05
NEK3-210ENST00000620675 CPT1AP50416 773 aa15.36■□□□□ 0.05
NEK3-210ENST00000620675 KRT76Q01546 638 aa15.36■□□□□ 0.05
NEK3-210ENST00000620675 STK38Q15208 465 aa15.36■□□□□ 0.05
NEK3-210ENST00000620675 RNF180Q86T96 592 aa15.36■□□□□ 0.05
NEK3-210ENST00000620675 SPC25Q9HBM1 224 aa15.36■□□□□ 0.05
NEK3-210ENST00000620675 ARID2Q68CP9 1835 aa15.36■□□□□ 0.05
NEK3-210ENST00000620675 GRIN2DO15399 1336 aa15.36■□□□□ 0.05
NEK3-210ENST00000620675 SUPT20HL2P0C7V6 817 aa15.36■□□□□ 0.05
NEK3-210ENST00000620675 ATP4AP20648 1035 aa15.36■□□□□ 0.05
NEK3-210ENST00000620675 MARK3P27448 753 aa15.36■□□□□ 0.05
NEK3-210ENST00000620675 ACLYP53396 1101 aa15.36■□□□□ 0.05
NEK3-210ENST00000620675 CHMP4BP1P59074 171 aa15.36■□□□□ 0.05
NEK3-210ENST00000620675 CYP4A11Q02928 519 aa15.36■□□□□ 0.05
NEK3-210ENST00000620675 DGKDQ16760 1214 aa15.36■□□□□ 0.05
NEK3-210ENST00000620675 SWSAP1Q6NVH7 229 aa15.36■□□□□ 0.05
NEK3-210ENST00000620675 MIER3Q7Z3K6 550 aa15.36■□□□□ 0.05
NEK3-210ENST00000620675 BANK1Q8NDB2 785 aa15.36■□□□□ 0.05
NEK3-210ENST00000620675 IGKV6D-21A0A0A0MT36 114 aa15.35■□□□□ 0.05
NEK3-210ENST00000620675 WDR64B1ANS9 1081 aa15.35■□□□□ 0.05
NEK3-210ENST00000620675 SPTLC2O15270 562 aa15.35■□□□□ 0.05
NEK3-210ENST00000620675 ZNF862O60290 1169 aa15.35■□□□□ 0.05
NEK3-210ENST00000620675 PPFIA4O75335 1185 aa15.35■□□□□ 0.05
NEK3-210ENST00000620675 PRPHP41219 470 aa15.35■□□□□ 0.05
NEK3-210ENST00000620675 FXR2P51116 673 aaKnown RBP eCLIP15.35■□□□□ 0.05
NEK3-210ENST00000620675 ECM1Q16610 540 aa15.35■□□□□ 0.05
NEK3-210ENST00000620675 TPRNQ4KMQ1 711 aa15.35■□□□□ 0.05
NEK3-210ENST00000620675 DTHD1Q6ZMT9 781 aa15.35■□□□□ 0.05
NEK3-210ENST00000620675 IGSF22Q8N9C0 903 aa15.35■□□□□ 0.05
NEK3-210ENST00000620675 LEO1Q8WVC0 666 aaPredicted RBP15.35■□□□□ 0.05
NEK3-210ENST00000620675 MMTAG2Q9BU76 263 aaKnown RBP15.35■□□□□ 0.05
NEK3-210ENST00000620675 PCDHA10Q9Y5I2 948 aa15.35■□□□□ 0.05
NEK3-210ENST00000620675 A0A1W2PQ45 241 aaPredicted RBP15.34■□□□□ 0.05
NEK3-210ENST00000620675 A0A1W2PQY0 241 aa15.34■□□□□ 0.05
NEK3-210ENST00000620675 TMEM150BA6NC51 233 aa15.34■□□□□ 0.05
NEK3-210ENST00000620675 LAD1O00515 517 aa15.34■□□□□ 0.05
NEK3-210ENST00000620675 ZBTB39O15060 712 aa15.34■□□□□ 0.05
NEK3-210ENST00000620675 ARRDC4Q8NCT1 418 aa15.34■□□□□ 0.05
NEK3-210ENST00000620675 DYDC2Q96IM9 177 aa15.34■□□□□ 0.05
NEK3-210ENST00000620675 PAWRQ96IZ0 340 aaKnown RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms