RNA–Protein interactions for RNA: ENST00000618836.4

UBE2D3-233, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-233ENST00000618836 POGKQ9P215 609 aa4.53□□□□□ -1.68
UBE2D3-233ENST00000618836 ZNF510Q9Y2H8 683 aa4.53□□□□□ -1.68
UBE2D3-233ENST00000618836 IBTKQ9P2D0 1353 aaPredicted RBP4.53□□□□□ -1.68
UBE2D3-233ENST00000618836 PRPF3O43395 683 aaKnown RBP4.53□□□□□ -1.68
UBE2D3-233ENST00000618836 SNX4O95219 450 aa4.53□□□□□ -1.68
UBE2D3-233ENST00000618836 CFHP08603 1231 aa4.53□□□□□ -1.68
UBE2D3-233ENST00000618836 IDO1P14902 403 aa4.53□□□□□ -1.68
UBE2D3-233ENST00000618836 TMOD1P28289 359 aa4.53□□□□□ -1.68
UBE2D3-233ENST00000618836 CYP2C19P33261 490 aa4.53□□□□□ -1.68
UBE2D3-233ENST00000618836 DGKGP49619 791 aa4.53□□□□□ -1.68
UBE2D3-233ENST00000618836 CLCN2P51788 898 aa4.53□□□□□ -1.68
UBE2D3-233ENST00000618836 KRBOX4Q5JUW0 171 aa4.53□□□□□ -1.68
UBE2D3-233ENST00000618836 FAM180BQ6P0A1 224 aa4.53□□□□□ -1.68
UBE2D3-233ENST00000618836 RSRC2Q7L4I2 434 aaKnown RBP4.53□□□□□ -1.68
UBE2D3-233ENST00000618836 TAOK1Q7L7X3 1001 aa4.53□□□□□ -1.68
UBE2D3-233ENST00000618836 MRPL10Q7Z7H8 261 aaKnown RBP4.53□□□□□ -1.68
UBE2D3-233ENST00000618836 TBC1D1Q86TI0 1168 aaPredicted RBP4.53□□□□□ -1.68
UBE2D3-233ENST00000618836 PJA1Q8NG27 643 aa4.53□□□□□ -1.68
UBE2D3-233ENST00000618836 ARHGAP45Q92619 1136 aa4.53□□□□□ -1.68
UBE2D3-233ENST00000618836 CCDC114Q96M63 670 aa4.53□□□□□ -1.68
UBE2D3-233ENST00000618836 DNAJC18Q9H819 358 aa4.53□□□□□ -1.68
UBE2D3-233ENST00000618836 PRM3Q9NNZ6 103 aa4.53□□□□□ -1.68
UBE2D3-233ENST00000618836 CASKIN1Q8WXD9 1431 aa4.53□□□□□ -1.68
UBE2D3-233ENST00000618836 H0Y626 953 aa4.52□□□□□ -1.69
UBE2D3-233ENST00000618836 RNGTTO60942 597 aaKnown RBP4.52□□□□□ -1.69
UBE2D3-233ENST00000618836 DAB1O75553 588 aa4.52□□□□□ -1.69
UBE2D3-233ENST00000618836 ATP6V1B1P15313 513 aa4.52□□□□□ -1.69
UBE2D3-233ENST00000618836 ATF4P18848 351 aaPredicted RBP4.52□□□□□ -1.69
UBE2D3-233ENST00000618836 ADH7P40394 386 aa4.52□□□□□ -1.69
UBE2D3-233ENST00000618836 MNAT1P51948 309 aa4.52□□□□□ -1.69
UBE2D3-233ENST00000618836 ARPC4P59998 168 aa4.52□□□□□ -1.69
UBE2D3-233ENST00000618836 AKAP17AQ02040 695 aaKnown RBP4.52□□□□□ -1.69
UBE2D3-233ENST00000618836 GBE1Q04446 702 aa4.52□□□□□ -1.69
UBE2D3-233ENST00000618836 MTMR2Q13614 643 aa4.52□□□□□ -1.69
UBE2D3-233ENST00000618836 C15orf59Q2T9L4 293 aaPredicted RBP4.52□□□□□ -1.69
UBE2D3-233ENST00000618836 FAM102BQ5T8I3 360 aa4.52□□□□□ -1.69
UBE2D3-233ENST00000618836 KDELC1Q6UW63 502 aa4.52□□□□□ -1.69
UBE2D3-233ENST00000618836 TMC4Q7Z404 712 aa4.52□□□□□ -1.69
UBE2D3-233ENST00000618836 DDX42Q86XP3 938 aaKnown RBP eCLIP4.52□□□□□ -1.69
UBE2D3-233ENST00000618836 RAB11FIP4Q86YS3 637 aa4.52□□□□□ -1.69
UBE2D3-233ENST00000618836 C1orf216Q8TAB5 229 aa4.52□□□□□ -1.69
UBE2D3-233ENST00000618836 FAM81AQ8TBF8 368 aa4.52□□□□□ -1.69
UBE2D3-233ENST00000618836 PI4K2BQ8TCG2 481 aa4.52□□□□□ -1.69
UBE2D3-233ENST00000618836 GPT2Q8TD30 523 aa4.52□□□□□ -1.69
UBE2D3-233ENST00000618836 CTNNBL1Q8WYA6 563 aaPredicted RBP4.52□□□□□ -1.69
UBE2D3-233ENST00000618836 ZPBPQ9BS86 351 aa4.52□□□□□ -1.69
UBE2D3-233ENST00000618836 RTFDC1Q9BY42 306 aaPredicted RBP4.52□□□□□ -1.69
UBE2D3-233ENST00000618836 ASPSCR1Q9BZE9 553 aa4.52□□□□□ -1.69
UBE2D3-233ENST00000618836 UPF3BQ9BZI7 483 aaKnown RBP4.52□□□□□ -1.69
UBE2D3-233ENST00000618836 PLCB1Q9NQ66 1216 aa4.52□□□□□ -1.69
UBE2D3-233ENST00000618836 HOMER3Q9NSC5 361 aa4.52□□□□□ -1.69
UBE2D3-233ENST00000618836 SIRPGQ9P1W8 387 aa4.52□□□□□ -1.69
UBE2D3-233ENST00000618836 ZFATQ9P243 1243 aa4.52□□□□□ -1.69
UBE2D3-233ENST00000618836 DDX25Q9UHL0 483 aaKnown RBP4.52□□□□□ -1.69
UBE2D3-233ENST00000618836 GJD2Q9UKL4 321 aa4.52□□□□□ -1.69
UBE2D3-233ENST00000618836 C4AP0C0L4 1744 aa4.52□□□□□ -1.69
UBE2D3-233ENST00000618836 C4BP0C0L5 1744 aa4.52□□□□□ -1.69
UBE2D3-233ENST00000618836 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.52□□□□□ -1.69
UBE2D3-233ENST00000618836 SERTM1A2A2V5 107 aa4.52□□□□□ -1.69
UBE2D3-233ENST00000618836 RASSF10A6NK89 507 aa4.52□□□□□ -1.69
UBE2D3-233ENST00000618836 ALG1L2C9J202 215 aa4.52□□□□□ -1.69
UBE2D3-233ENST00000618836 H0YC42 278 aa4.52□□□□□ -1.69
UBE2D3-233ENST00000618836 MASP2O00187 686 aa4.52□□□□□ -1.69
UBE2D3-233ENST00000618836 PRKAR2BP31323 418 aa4.52□□□□□ -1.69
UBE2D3-233ENST00000618836 RPIAP49247 311 aa4.52□□□□□ -1.69
UBE2D3-233ENST00000618836 BASP1P80723 227 aaKnown RBP4.52□□□□□ -1.69
UBE2D3-233ENST00000618836 CD83Q01151 205 aa4.52□□□□□ -1.69
UBE2D3-233ENST00000618836 LHX8Q68G74 356 aa4.52□□□□□ -1.69
UBE2D3-233ENST00000618836 TLDC1Q6P9B6 456 aa4.52□□□□□ -1.69
UBE2D3-233ENST00000618836 SPATA24Q86W54 205 aa4.52□□□□□ -1.69
UBE2D3-233ENST00000618836 CCAR2Q8N163 923 aaKnown RBP4.52□□□□□ -1.69
UBE2D3-233ENST00000618836 FAM26EQ8N5C1 309 aa4.52□□□□□ -1.69
UBE2D3-233ENST00000618836 IPMKQ8NFU5 416 aa4.52□□□□□ -1.69
UBE2D3-233ENST00000618836 CCHCR1Q8TD31 782 aa4.52□□□□□ -1.69
UBE2D3-233ENST00000618836 PPM1MQ96MI6 270 aa4.52□□□□□ -1.69
UBE2D3-233ENST00000618836 FAM161BQ96MY7 647 aa4.52□□□□□ -1.69
UBE2D3-233ENST00000618836 PRO3102Q9H379 93 aa4.52□□□□□ -1.69
UBE2D3-233ENST00000618836 TBC1D22BQ9NU19 505 aa4.52□□□□□ -1.69
UBE2D3-233ENST00000618836 RNF19AQ9NV58 838 aa4.52□□□□□ -1.69
UBE2D3-233ENST00000618836 ARGLU1Q9NWB6 273 aaPredicted RBP4.52□□□□□ -1.69
UBE2D3-233ENST00000618836 ZNF446Q9NWS9 450 aa4.52□□□□□ -1.69
UBE2D3-233ENST00000618836 NOVA2Q9UNW9 492 aaKnown RBP4.52□□□□□ -1.69
UBE2D3-233ENST00000618836 ATP11BQ9Y2G3 1177 aa4.52□□□□□ -1.69
UBE2D3-233ENST00000618836 MTF2Q9Y483 593 aaPredicted RBP4.52□□□□□ -1.69
UBE2D3-233ENST00000618836 CRB1P82279 1406 aa4.52□□□□□ -1.69
UBE2D3-233ENST00000618836 MYO1CO00159 1063 aa4.52□□□□□ -1.69
UBE2D3-233ENST00000618836 ZNF189O75820 626 aaPredicted RBP4.52□□□□□ -1.69
UBE2D3-233ENST00000618836 SLITRK3O94933 977 aa4.52□□□□□ -1.69
UBE2D3-233ENST00000618836 YEATS4O95619 227 aa4.52□□□□□ -1.69
UBE2D3-233ENST00000618836 TPM1P09493 284 aa4.52□□□□□ -1.69
UBE2D3-233ENST00000618836 GCFC2P16383 781 aaKnown RBP4.52□□□□□ -1.69
UBE2D3-233ENST00000618836 GARTP22102 1010 aa4.52□□□□□ -1.69
UBE2D3-233ENST00000618836 ECE1P42892 770 aa4.52□□□□□ -1.69
UBE2D3-233ENST00000618836 HNRNPH2P55795 449 aaKnown RBP4.52□□□□□ -1.69
UBE2D3-233ENST00000618836 PHEXP78562 749 aa4.52□□□□□ -1.69
UBE2D3-233ENST00000618836 PPP1R7Q15435 360 aa4.52□□□□□ -1.69
UBE2D3-233ENST00000618836 CLUL1Q15846 466 aa4.52□□□□□ -1.69
UBE2D3-233ENST00000618836 GPATCH4Q5T3I0 446 aaKnown RBP4.52□□□□□ -1.69
UBE2D3-233ENST00000618836 PCNX4Q63HM2 1172 aa4.52□□□□□ -1.69
UBE2D3-233ENST00000618836 CREB3L3Q68CJ9 461 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms