RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 CDC37Q16543 378 aaPredicted RBP22.41■■□□□ 1.18
NEK3-208ENST00000618534 CCDC65Q8IXS2 484 aa22.41■■□□□ 1.18
NEK3-208ENST00000618534 SCFD1Q8WVM8 642 aa22.41■■□□□ 1.18
NEK3-208ENST00000618534 KCTD10Q9H3F6 313 aa22.41■■□□□ 1.18
NEK3-208ENST00000618534 PCDHA12Q9UN75 941 aa22.41■■□□□ 1.18
NEK3-208ENST00000618534 KIAA1024Q9UPX6 916 aa22.41■■□□□ 1.18
NEK3-208ENST00000618534 ZEB2O60315 1214 aa22.41■■□□□ 1.18
NEK3-208ENST00000618534 SNHG28P0DPA3 235 aa22.41■■□□□ 1.18
NEK3-208ENST00000618534 AKR1B1P15121 316 aa22.41■■□□□ 1.18
NEK3-208ENST00000618534 KLHL7Q8IXQ5 586 aa22.41■■□□□ 1.18
NEK3-208ENST00000618534 ADGRF4Q8IZF3 695 aa22.41■■□□□ 1.18
NEK3-208ENST00000618534 USP38Q8NB14 1042 aa22.41■■□□□ 1.18
NEK3-208ENST00000618534 KAT2BQ92831 832 aa22.41■■□□□ 1.18
NEK3-208ENST00000618534 PLIN4Q96Q06 1357 aa22.41■■□□□ 1.18
NEK3-208ENST00000618534 A6NNZ2 444 aa22.4■■□□□ 1.18
NEK3-208ENST00000618534 TUBB8Q3ZCM7 444 aa22.4■■□□□ 1.18
NEK3-208ENST00000618534 HERC4Q5GLZ8 1057 aaPredicted RBP22.4■■□□□ 1.18
NEK3-208ENST00000618534 HYIQ5T013 277 aa22.4■■□□□ 1.18
NEK3-208ENST00000618534 C15orf52Q6ZUT6 534 aaKnown RBP22.4■■□□□ 1.18
NEK3-208ENST00000618534 GPBP1Q86WP2 473 aa22.4■■□□□ 1.18
NEK3-208ENST00000618534 ARHGEF1Q92888 912 aaKnown RBP22.4■■□□□ 1.18
NEK3-208ENST00000618534 ATAD5Q96QE3 1844 aa22.4■■□□□ 1.18
NEK3-208ENST00000618534 PNMA6FA0A0J9YX94 578 aa22.4■■□□□ 1.18
NEK3-208ENST00000618534 POTEB3A0JP26 581 aa22.4■■□□□ 1.18
NEK3-208ENST00000618534 POTECB2RU33 542 aa22.4■■□□□ 1.18
NEK3-208ENST00000618534 UFL1O94874 794 aa22.4■■□□□ 1.18
NEK3-208ENST00000618534 PLA2G4BP0C869 781 aa22.4■■□□□ 1.18
NEK3-208ENST00000618534 EPS15P42566 896 aa22.4■■□□□ 1.18
NEK3-208ENST00000618534 GUCY1A3Q02108 690 aa22.4■■□□□ 1.18
NEK3-208ENST00000618534 TTBK2Q6IQ55 1244 aa22.4■■□□□ 1.18
NEK3-208ENST00000618534 PPP1R18Q6NYC8 613 aa22.4■■□□□ 1.18
NEK3-208ENST00000618534 POTEBQ6S5H4 581 aa22.4■■□□□ 1.18
NEK3-208ENST00000618534 WHAMMQ8TF30 809 aa22.4■■□□□ 1.18
NEK3-208ENST00000618534 NT5C3AQ9H0P0 336 aa22.4■■□□□ 1.18
NEK3-208ENST00000618534 KDM3AQ9Y4C1 1321 aa22.4■■□□□ 1.18
NEK3-208ENST00000618534 ADAM9Q13443 819 aa22.39■■□□□ 1.18
NEK3-208ENST00000618534 MFSD14BQ5SR56 506 aa22.39■■□□□ 1.18
NEK3-208ENST00000618534 DPP8Q6V1X1 898 aaPredicted RBP22.39■■□□□ 1.18
NEK3-208ENST00000618534 CD302Q8IX05 232 aa22.39■■□□□ 1.18
NEK3-208ENST00000618534 CUL5Q93034 780 aa22.39■■□□□ 1.18
NEK3-208ENST00000618534 ARFGEF1Q9Y6D6 1849 aa22.39■■□□□ 1.17
NEK3-208ENST00000618534 CLSTN1O94985 981 aa22.39■■□□□ 1.17
NEK3-208ENST00000618534 ACTN1P12814 892 aa22.39■■□□□ 1.17
NEK3-208ENST00000618534 NR1D1P20393 614 aa22.39■■□□□ 1.17
NEK3-208ENST00000618534 TNNC1P63316 161 aa22.39■■□□□ 1.17
NEK3-208ENST00000618534 ZNF543Q08ER8 600 aa22.39■■□□□ 1.17
NEK3-208ENST00000618534 KCNH2Q12809 1159 aa22.39■■□□□ 1.17
NEK3-208ENST00000618534 GOLPH3Q9H4A6 298 aa22.39■■□□□ 1.17
NEK3-208ENST00000618534 EMILIN3Q9NT22 766 aa22.39■■□□□ 1.17
NEK3-208ENST00000618534 RTCBQ9Y3I0 505 aaKnown RBP22.39■■□□□ 1.17
NEK3-208ENST00000618534 MYH4Q9Y623 1939 aa22.38■■□□□ 1.17
NEK3-208ENST00000618534 KCNK3O14649 394 aa22.38■■□□□ 1.17
NEK3-208ENST00000618534 MYBP10242 640 aa22.38■■□□□ 1.17
NEK3-208ENST00000618534 LSP1P33241 339 aa22.38■■□□□ 1.17
NEK3-208ENST00000618534 PTK2Q05397 1052 aa22.38■■□□□ 1.17
NEK3-208ENST00000618534 PICALMQ13492 652 aa22.38■■□□□ 1.17
NEK3-208ENST00000618534 TAF4BQ92750 862 aa22.38■■□□□ 1.17
NEK3-208ENST00000618534 TMEM59LQ9UK28 342 aa22.38■■□□□ 1.17
NEK3-208ENST00000618534 GAKO14976 1311 aa22.38■■□□□ 1.17
NEK3-208ENST00000618534 CYP11B2P19099 503 aa22.38■■□□□ 1.17
NEK3-208ENST00000618534 INPP5BP32019 993 aa22.38■■□□□ 1.17
NEK3-208ENST00000618534 SLC16A2P36021 539 aa22.38■■□□□ 1.17
NEK3-208ENST00000618534 FAM98CQ17RN3 349 aaKnown RBP22.38■■□□□ 1.17
NEK3-208ENST00000618534 DNAAF5Q86Y56 855 aa22.38■■□□□ 1.17
NEK3-208ENST00000618534 ZC3H3Q8IXZ2 948 aaKnown RBP22.38■■□□□ 1.17
NEK3-208ENST00000618534 IL1R1P14778 569 aa22.37■■□□□ 1.17
NEK3-208ENST00000618534 ERVK-9P63128 1117 aa22.37■■□□□ 1.17
NEK3-208ENST00000618534 RPS6KA1Q15418 735 aa22.37■■□□□ 1.17
NEK3-208ENST00000618534 ATP6V1G3Q96LB4 118 aa22.37■■□□□ 1.17
NEK3-208ENST00000618534 ZHX3Q9H4I2 956 aa22.37■■□□□ 1.17
NEK3-208ENST00000618534 PLAAQ9Y263 795 aa22.37■■□□□ 1.17
NEK3-208ENST00000618534 IGKV6D-41A0A0C4DH26 115 aa22.37■■□□□ 1.17
NEK3-208ENST00000618534 GCFC2P16383 781 aaKnown RBP22.37■■□□□ 1.17
NEK3-208ENST00000618534 PTPROQ16827 1216 aa22.37■■□□□ 1.17
NEK3-208ENST00000618534 ZNF571Q7Z3V5 609 aaPredicted RBP22.37■■□□□ 1.17
NEK3-208ENST00000618534 IPO4Q8TEX9 1081 aaKnown RBP22.37■■□□□ 1.17
NEK3-208ENST00000618534 FAM163AQ96GL9 167 aaPredicted RBP22.37■■□□□ 1.17
NEK3-208ENST00000618534 HSPA9P38646 679 aaKnown RBP22.36■■□□□ 1.17
NEK3-208ENST00000618534 GTF2A1P52655 376 aaPredicted RBP22.36■■□□□ 1.17
NEK3-208ENST00000618534 MRPL12P52815 198 aaKnown RBP22.36■■□□□ 1.17
NEK3-208ENST00000618534 GABPAQ06546 454 aa22.36■■□□□ 1.17
NEK3-208ENST00000618534 B4GALNT4Q76KP1 1039 aa22.36■■□□□ 1.17
NEK3-208ENST00000618534 MAATS1Q7Z4T9 603 aa22.36■■□□□ 1.17
NEK3-208ENST00000618534 IRF2BP2Q7Z5L9 587 aa22.36■■□□□ 1.17
NEK3-208ENST00000618534 TAF1DQ9H5J8 278 aaPredicted RBP22.36■■□□□ 1.17
NEK3-208ENST00000618534 HDAC9Q9UKV0 1011 aa22.36■■□□□ 1.17
NEK3-208ENST00000618534 USP17L10C9JJH3 530 aa22.36■■□□□ 1.17
NEK3-208ENST00000618534 CETN3O15182 167 aa22.36■■□□□ 1.17
NEK3-208ENST00000618534 KIF4AO95239 1232 aa22.36■■□□□ 1.17
NEK3-208ENST00000618534 SLC9A1P19634 815 aa22.36■■□□□ 1.17
NEK3-208ENST00000618534 NR2F2P24468 414 aa22.36■■□□□ 1.17
NEK3-208ENST00000618534 CASP5P51878 434 aa22.36■■□□□ 1.17
NEK3-208ENST00000618534 HLTFQ14527 1009 aaKnown RBP eCLIP22.36■■□□□ 1.17
NEK3-208ENST00000618534 EMC10Q5UCC4 262 aa22.36■■□□□ 1.17
NEK3-208ENST00000618534 MMS22LQ6ZRQ5 1243 aa22.36■■□□□ 1.17
NEK3-208ENST00000618534 EPN3Q9H201 632 aa22.36■■□□□ 1.17
NEK3-208ENST00000618534 PSTPIP2Q9H939 334 aa22.36■■□□□ 1.17
NEK3-208ENST00000618534 BTNL10A8MVZ5 291 aa22.35■■□□□ 1.17
NEK3-208ENST00000618534 KRT18P05783 430 aaKnown RBP22.35■■□□□ 1.17
NEK3-208ENST00000618534 ECHS1P30084 290 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms