RNA–Protein interactions for RNA: ENST00000618464.1

SYNGR3-206, Transcript of synaptogyrin 3, humanhuman

TSL 1 (best) BASIC

Gene SYNGR3, Length 1,213 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-206ENST00000618464 CCDC85BQ15834 202 aaPredicted RBP25.22■■□□□ 1.63
SYNGR3-206ENST00000618464 JAKMIP3Q5VZ66 844 aa25.22■■□□□ 1.63
SYNGR3-206ENST00000618464 ERICH6BQ5W0A0 696 aa25.22■■□□□ 1.63
SYNGR3-206ENST00000618464 SERINC5Q86VE9 423 aa25.22■■□□□ 1.63
SYNGR3-206ENST00000618464 LARP6Q9BRS8 491 aaKnown RBP25.22■■□□□ 1.63
SYNGR3-206ENST00000618464 UPF3BQ9BZI7 483 aaKnown RBP25.22■■□□□ 1.63
SYNGR3-206ENST00000618464 RNPEPQ9H4A4 650 aa25.22■■□□□ 1.63
SYNGR3-206ENST00000618464 SETD4Q9NVD3 440 aa25.22■■□□□ 1.63
SYNGR3-206ENST00000618464 CYP46A1Q9Y6A2 500 aa25.22■■□□□ 1.63
SYNGR3-206ENST00000618464 MYO9BQ13459 2157 aa25.22■■□□□ 1.63
SYNGR3-206ENST00000618464 ADAMTS3O15072 1205 aa25.21■■□□□ 1.63
SYNGR3-206ENST00000618464 TREHO43280 583 aa25.21■■□□□ 1.63
SYNGR3-206ENST00000618464 NBNO60934 754 aa25.21■■□□□ 1.63
SYNGR3-206ENST00000618464 THPOP40225 353 aa25.21■■□□□ 1.63
SYNGR3-206ENST00000618464 CLK2P49760 499 aaKnown RBP25.21■■□□□ 1.63
SYNGR3-206ENST00000618464 AKAP17AQ02040 695 aaKnown RBP25.21■■□□□ 1.63
SYNGR3-206ENST00000618464 AP3B2Q13367 1082 aa25.21■■□□□ 1.63
SYNGR3-206ENST00000618464 PKN1Q16512 942 aa25.21■■□□□ 1.63
SYNGR3-206ENST00000618464 PPP2R2DQ66LE6 453 aa25.21■■□□□ 1.63
SYNGR3-206ENST00000618464 SYMPKQ92797 1274 aaKnown RBP25.21■■□□□ 1.63
SYNGR3-206ENST00000618464 SLC26A6Q9BXS9 759 aa25.21■■□□□ 1.63
SYNGR3-206ENST00000618464 GLT8D2Q9H1C3 349 aa25.21■■□□□ 1.63
SYNGR3-206ENST00000618464 KCNH7Q9NS40 1196 aa25.21■■□□□ 1.63
SYNGR3-206ENST00000618464 CHD7Q9P2D1 2997 aa25.21■■□□□ 1.63
SYNGR3-206ENST00000618464 GSTTP1A0A1W2PQM5 241 aa25.2■■□□□ 1.62
SYNGR3-206ENST00000618464 PRPF3O43395 683 aaKnown RBP25.2■■□□□ 1.62
SYNGR3-206ENST00000618464 MARK3P27448 753 aa25.2■■□□□ 1.62
SYNGR3-206ENST00000618464 HOXC8P31273 242 aa25.2■■□□□ 1.62
SYNGR3-206ENST00000618464 SREBF1P36956 1147 aa25.2■■□□□ 1.62
SYNGR3-206ENST00000618464 TJAP1Q5JTD0 557 aa25.2■■□□□ 1.62
SYNGR3-206ENST00000618464 TRAF7Q6Q0C0 670 aa25.2■■□□□ 1.62
SYNGR3-206ENST00000618464 TEX2Q8IWB9 1127 aa25.2■■□□□ 1.62
SYNGR3-206ENST00000618464 SEPT1Q8WYJ6 367 aa25.2■■□□□ 1.62
SYNGR3-206ENST00000618464 MAFGO15525 162 aa25.19■■□□□ 1.62
SYNGR3-206ENST00000618464 ARP10275 920 aa25.19■■□□□ 1.62
SYNGR3-206ENST00000618464 ZNF76P36508 570 aa25.19■■□□□ 1.62
SYNGR3-206ENST00000618464 NTRK3Q16288 839 aa25.19■■□□□ 1.62
SYNGR3-206ENST00000618464 JPH1Q9HDC5 661 aaPredicted RBP25.19■■□□□ 1.62
SYNGR3-206ENST00000618464 PARNO95453 639 aaKnown RBP25.18■■□□□ 1.62
SYNGR3-206ENST00000618464 CXCL10P02778 98 aa25.18■■□□□ 1.62
SYNGR3-206ENST00000618464 GNAT1P11488 350 aa25.18■■□□□ 1.62
SYNGR3-206ENST00000618464 EVCP57679 992 aa25.18■■□□□ 1.62
SYNGR3-206ENST00000618464 ARHGAP4P98171 946 aa25.18■■□□□ 1.62
SYNGR3-206ENST00000618464 MBTPS1Q14703 1052 aa25.18■■□□□ 1.62
SYNGR3-206ENST00000618464 TCTN1Q2MV58 587 aa25.18■■□□□ 1.62
SYNGR3-206ENST00000618464 CEP55Q53EZ4 464 aa25.18■■□□□ 1.62
SYNGR3-206ENST00000618464 CNKSR3Q6P9H4 555 aa25.18■■□□□ 1.62
SYNGR3-206ENST00000618464 CCDC12Q8WUD4 166 aaPredicted RBP25.18■■□□□ 1.62
SYNGR3-206ENST00000618464 GLG1Q92896 1179 aa25.18■■□□□ 1.62
SYNGR3-206ENST00000618464 SLC9A7Q96T83 725 aa25.18■■□□□ 1.62
SYNGR3-206ENST00000618464 ZMYND12Q9H0C1 365 aa25.18■■□□□ 1.62
SYNGR3-206ENST00000618464 C6orf50Q9HD87 102 aa25.18■■□□□ 1.62
SYNGR3-206ENST00000618464 ESYT2A0FGR8 921 aa25.17■■□□□ 1.62
SYNGR3-206ENST00000618464 BAIAP3O94812 1187 aa25.17■■□□□ 1.62
SYNGR3-206ENST00000618464 CA3P07451 260 aa25.17■■□□□ 1.62
SYNGR3-206ENST00000618464 IFNAR1P17181 557 aa25.17■■□□□ 1.62
SYNGR3-206ENST00000618464 KCNJ6P48051 423 aa25.17■■□□□ 1.62
SYNGR3-206ENST00000618464 LMBR1Q8WVP7 490 aa25.17■■□□□ 1.62
SYNGR3-206ENST00000618464 SDF4Q9BRK5 362 aa25.17■■□□□ 1.62
SYNGR3-206ENST00000618464 RNF26Q9BY78 433 aaPredicted RBP25.17■■□□□ 1.62
SYNGR3-206ENST00000618464 TM6SF1Q9BZW5 370 aa25.17■■□□□ 1.62
SYNGR3-206ENST00000618464 AGO4Q9HCK5 861 aaKnown RBP25.17■■□□□ 1.62
SYNGR3-206ENST00000618464 SLC9A2Q9UBY0 812 aa25.17■■□□□ 1.62
SYNGR3-206ENST00000618464 RSPH10B2B2RC85 870 aa25.16■■□□□ 1.62
SYNGR3-206ENST00000618464 CTSHP09668 335 aa25.16■■□□□ 1.62
SYNGR3-206ENST00000618464 RSPH10BP0C881 870 aa25.16■■□□□ 1.62
SYNGR3-206ENST00000618464 WDR5P61964 334 aaKnown RBP25.16■■□□□ 1.62
SYNGR3-206ENST00000618464 STK3Q13188 491 aa25.16■■□□□ 1.62
SYNGR3-206ENST00000618464 REXO1Q8N1G1 1221 aaKnown RBP25.16■■□□□ 1.62
SYNGR3-206ENST00000618464 RASGRP4Q8TDF6 673 aa25.16■■□□□ 1.62
SYNGR3-206ENST00000618464 UIMC1Q96RL1 719 aa25.16■■□□□ 1.62
SYNGR3-206ENST00000618464 PDRG1Q9NUG6 133 aa25.16■■□□□ 1.62
SYNGR3-206ENST00000618464 VPS54Q9P1Q0 977 aa25.16■■□□□ 1.62
SYNGR3-206ENST00000618464 RFXAPO00287 272 aa25.15■■□□□ 1.62
SYNGR3-206ENST00000618464 PPFIA1Q13136 1202 aa25.15■■□□□ 1.62
SYNGR3-206ENST00000618464 ITGB3BPQ13352 177 aaPredicted RBP25.15■■□□□ 1.62
SYNGR3-206ENST00000618464 TMCO2Q7Z6W1 182 aaPredicted RBP25.15■■□□□ 1.62
SYNGR3-206ENST00000618464 HERC6Q8IVU3 1022 aa25.15■■□□□ 1.62
SYNGR3-206ENST00000618464 PHOSPHO2Q8TCD6 241 aa25.15■■□□□ 1.62
SYNGR3-206ENST00000618464 ATXN2LQ8WWM7 1075 aaKnown RBP25.15■■□□□ 1.62
SYNGR3-206ENST00000618464 SMARCAD1Q9H4L7 1026 aa25.15■■□□□ 1.62
SYNGR3-206ENST00000618464 CERS4Q9HA82 394 aa25.15■■□□□ 1.62
SYNGR3-206ENST00000618464 ERAP1Q9NZ08 941 aa25.15■■□□□ 1.62
SYNGR3-206ENST00000618464 THEGQ9P2T0 379 aa25.15■■□□□ 1.62
SYNGR3-206ENST00000618464 NFASCO94856 1347 aa25.14■■□□□ 1.62
SYNGR3-206ENST00000618464 NRCAMQ92823 1304 aa25.14■■□□□ 1.62
SYNGR3-206ENST00000618464 DDX39AO00148 427 aaKnown RBP25.14■■□□□ 1.62
SYNGR3-206ENST00000618464 MEIS1O00470 390 aa25.14■■□□□ 1.62
SYNGR3-206ENST00000618464 ARHGEF15O94989 841 aa25.14■■□□□ 1.62
SYNGR3-206ENST00000618464 ACTR2P61160 394 aa25.14■■□□□ 1.62
SYNGR3-206ENST00000618464 DEFB103AP81534 67 aa25.14■■□□□ 1.62
SYNGR3-206ENST00000618464 PCYT2Q99447 389 aa25.14■■□□□ 1.62
SYNGR3-206ENST00000618464 EMSYQ7Z589 1322 aa25.13■■□□□ 1.61
SYNGR3-206ENST00000618464 FAM86B1E9PN63 330 aa25.13■■□□□ 1.61
SYNGR3-206ENST00000618464 LGR5O75473 907 aa25.13■■□□□ 1.61
SYNGR3-206ENST00000618464 FAM86B2P0C5J1 330 aa25.13■■□□□ 1.61
SYNGR3-206ENST00000618464 GNA11P29992 359 aa25.13■■□□□ 1.61
SYNGR3-206ENST00000618464 ADAM17P78536 824 aa25.13■■□□□ 1.61
SYNGR3-206ENST00000618464 PLA2G4DQ86XP0 818 aa25.13■■□□□ 1.61
SYNGR3-206ENST00000618464 CCDC148Q8NFR7 591 aa25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms