RNA–Protein interactions for RNA: ENST00000617958.4

CPEB1-215, Transcript of cytoplasmic polyadenylation element binding protein 1, human

TSL 1 (best) BASIC

Gene CPEB1, Length 2,776 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPEB1-215	ENST00000617958	KRT26	Q7Z3Y9	468 aa		11.73	□□□□□ -0.53
CPEB1-215	ENST00000617958	SH3TC2	Q8TF17	1288 aa		11.73	□□□□□ -0.53
CPEB1-215	ENST00000617958	PGM2	Q96G03	612 aa		11.73	□□□□□ -0.53
CPEB1-215	ENST00000617958	DHTKD1	Q96HY7	919 aa	Predicted RBP	11.73	□□□□□ -0.53
CPEB1-215	ENST00000617958	PDGFD	Q9GZP0	370 aa	Predicted RBP	11.73	□□□□□ -0.53
CPEB1-215	ENST00000617958	LUC7L	Q9NQ29	371 aa	Known RBP	11.73	□□□□□ -0.53
CPEB1-215	ENST00000617958	SDAD1	Q9NVU7	687 aa	Known RBP eCLIP	11.73	□□□□□ -0.53
CPEB1-215	ENST00000617958	AGAP1	Q9UPQ3	857 aa		11.73	□□□□□ -0.53
CPEB1-215	ENST00000617958	GSTA2	P09210	222 aa		11.72	□□□□□ -0.53
CPEB1-215	ENST00000617958	COPS2	P61201	443 aa		11.72	□□□□□ -0.53
CPEB1-215	ENST00000617958	KCNJ2	P63252	427 aa		11.72	□□□□□ -0.53
CPEB1-215	ENST00000617958	ATP2C1	P98194	919 aa	Predicted RBP	11.72	□□□□□ -0.53
CPEB1-215	ENST00000617958	NR5A1	Q13285	461 aa		11.72	□□□□□ -0.53
CPEB1-215	ENST00000617958	TCIRG1	Q13488	830 aa		11.72	□□□□□ -0.53
CPEB1-215	ENST00000617958	ASTE1	Q2TB18	679 aa	Predicted RBP	11.72	□□□□□ -0.53
CPEB1-215	ENST00000617958	LMBR1L	Q6UX01	489 aa		11.72	□□□□□ -0.53
CPEB1-215	ENST00000617958	KIF6	Q6ZMV9	814 aa		11.72	□□□□□ -0.53
CPEB1-215	ENST00000617958	MS4A14	Q96JA4	679 aa		11.72	□□□□□ -0.53
CPEB1-215	ENST00000617958	TRIM4	Q9C037	500 aa		11.72	□□□□□ -0.53
CPEB1-215	ENST00000617958	CABP5	Q9NP86	173 aa		11.72	□□□□□ -0.53
CPEB1-215	ENST00000617958	KCNJ14	Q9UNX9	436 aa		11.72	□□□□□ -0.53
CPEB1-215	ENST00000617958	TIAM2	Q8IVF5	1701 aa		11.72	□□□□□ -0.53
CPEB1-215	ENST00000617958	MYH7B	A7E2Y1	1941 aa		11.72	□□□□□ -0.53
CPEB1-215	ENST00000617958	GPAA1	O43292	621 aa		11.72	□□□□□ -0.53
CPEB1-215	ENST00000617958	CASP7	P55210	303 aa		11.72	□□□□□ -0.53
CPEB1-215	ENST00000617958	EN1	Q05925	392 aa	Predicted RBP	11.72	□□□□□ -0.53
CPEB1-215	ENST00000617958	HLTF	Q14527	1009 aa	Known RBP eCLIP	11.72	□□□□□ -0.53
CPEB1-215	ENST00000617958	PPP2R5B	Q15173	497 aa		11.72	□□□□□ -0.53
CPEB1-215	ENST00000617958	PPP1R15B	Q5SWA1	713 aa		11.72	□□□□□ -0.53
CPEB1-215	ENST00000617958	MEI1	Q5TIA1	1274 aa		11.72	□□□□□ -0.53
CPEB1-215	ENST00000617958	TBC1D10C	Q8IV04	446 aa		11.72	□□□□□ -0.53
CPEB1-215	ENST00000617958	MTR	Q99707	1265 aa		11.72	□□□□□ -0.53
CPEB1-215	ENST00000617958	VCX	Q9H320	206 aa		11.72	□□□□□ -0.53
CPEB1-215	ENST00000617958	SUDS3	Q9H7L9	328 aa	Predicted RBP	11.72	□□□□□ -0.53
CPEB1-215	ENST00000617958	ECT2	Q9H8V3	914 aa		11.72	□□□□□ -0.53
CPEB1-215	ENST00000617958	ABCB11	O95342	1321 aa		11.71	□□□□□ -0.53
CPEB1-215	ENST00000617958		F8VZ95	297 aa		11.71	□□□□□ -0.53
CPEB1-215	ENST00000617958	IGF2BP3	O00425	579 aa	Known RBP eCLIP	11.71	□□□□□ -0.53
CPEB1-215	ENST00000617958	ZSCAN9	O15535	394 aa	Predicted RBP	11.71	□□□□□ -0.53
CPEB1-215	ENST00000617958	NCK2	O43639	380 aa		11.71	□□□□□ -0.53
CPEB1-215	ENST00000617958	HIP1R	O75146	1068 aa		11.71	□□□□□ -0.53
CPEB1-215	ENST00000617958	CAMTA2	O94983	1202 aa		11.71	□□□□□ -0.53
CPEB1-215	ENST00000617958	MME	P08473	750 aa		11.71	□□□□□ -0.53
CPEB1-215	ENST00000617958	XBP1	P17861	261 aa		11.71	□□□□□ -0.53
CPEB1-215	ENST00000617958	RXRA	P19793	462 aa		11.71	□□□□□ -0.53
CPEB1-215	ENST00000617958	PSMC4	P43686	418 aa		11.71	□□□□□ -0.53
CPEB1-215	ENST00000617958	PDE6C	P51160	858 aa		11.71	□□□□□ -0.53
CPEB1-215	ENST00000617958	TMEM67	Q5HYA8	995 aa		11.71	□□□□□ -0.53
CPEB1-215	ENST00000617958	FKBP15	Q5T1M5	1219 aa		11.71	□□□□□ -0.53
CPEB1-215	ENST00000617958	HHAT	Q5VTY9	493 aa		11.71	□□□□□ -0.53
CPEB1-215	ENST00000617958	SUSD4	Q5VX71	490 aa		11.71	□□□□□ -0.53
CPEB1-215	ENST00000617958	TMC3	Q7Z5M5	1100 aa		11.71	□□□□□ -0.53
CPEB1-215	ENST00000617958	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	11.71	□□□□□ -0.53
CPEB1-215	ENST00000617958	CNBD1	Q8NA66	436 aa		11.71	□□□□□ -0.53
CPEB1-215	ENST00000617958	MIPOL1	Q8TD10	442 aa		11.71	□□□□□ -0.53
CPEB1-215	ENST00000617958	SCFD2	Q8WU76	684 aa		11.71	□□□□□ -0.53
CPEB1-215	ENST00000617958	KLHL29	Q96CT2	875 aa		11.71	□□□□□ -0.53
CPEB1-215	ENST00000617958	MTMR8	Q96EF0	704 aa		11.71	□□□□□ -0.53
CPEB1-215	ENST00000617958	IFT43	Q96FT9	208 aa		11.71	□□□□□ -0.53
CPEB1-215	ENST00000617958	PLEKHG4B	Q96PX9	1271 aa		11.71	□□□□□ -0.53
CPEB1-215	ENST00000617958	RAB3IP	Q96QF0	476 aa	Predicted RBP	11.71	□□□□□ -0.53
CPEB1-215	ENST00000617958	INCENP	Q9NQS7	918 aa		11.71	□□□□□ -0.53
CPEB1-215	ENST00000617958	FBXL5	Q9UKA1	691 aa		11.71	□□□□□ -0.53
CPEB1-215	ENST00000617958	C2CD2	Q9Y426	696 aa		11.71	□□□□□ -0.53
CPEB1-215	ENST00000617958	BICDL2	A1A5D9	508 aa		11.71	□□□□□ -0.54
CPEB1-215	ENST00000617958	CCDC188	H7C350	402 aa		11.71	□□□□□ -0.54
CPEB1-215	ENST00000617958	AKR1B10	O60218	316 aa		11.71	□□□□□ -0.54
CPEB1-215	ENST00000617958	SNX3	O60493	162 aa		11.71	□□□□□ -0.54
CPEB1-215	ENST00000617958	NUDT17	P0C025	328 aa		11.71	□□□□□ -0.54
CPEB1-215	ENST00000617958	GUCY1A2	P33402	732 aa		11.71	□□□□□ -0.54
CPEB1-215	ENST00000617958	EIF4A3	P38919	411 aa	Known RBP	11.71	□□□□□ -0.54
CPEB1-215	ENST00000617958	IL6ST	P40189	918 aa	Predicted RBP	11.71	□□□□□ -0.54
CPEB1-215	ENST00000617958	KLC1	Q07866	573 aa		11.71	□□□□□ -0.54
CPEB1-215	ENST00000617958	ALX1	Q15699	326 aa		11.71	□□□□□ -0.54
CPEB1-215	ENST00000617958	TXNRD1	Q16881	649 aa		11.71	□□□□□ -0.54
CPEB1-215	ENST00000617958	KRT71	Q3SY84	523 aa		11.71	□□□□□ -0.54
CPEB1-215	ENST00000617958	NLRP10	Q86W26	655 aa		11.71	□□□□□ -0.54
CPEB1-215	ENST00000617958	LPIN2	Q92539	896 aa		11.71	□□□□□ -0.54
CPEB1-215	ENST00000617958	ARHGEF1	Q92888	912 aa	Known RBP	11.71	□□□□□ -0.54
CPEB1-215	ENST00000617958	TRIM47	Q96LD4	638 aa		11.71	□□□□□ -0.54
CPEB1-215	ENST00000617958	SNAP23	O00161	211 aa		11.7	□□□□□ -0.54
CPEB1-215	ENST00000617958	UBOX5	O94941	541 aa		11.7	□□□□□ -0.54
CPEB1-215	ENST00000617958	PENK	P01210	267 aa	Predicted RBP	11.7	□□□□□ -0.54
CPEB1-215	ENST00000617958	CCNB1	P14635	433 aa		11.7	□□□□□ -0.54
CPEB1-215	ENST00000617958	CDC25C	P30307	473 aa		11.7	□□□□□ -0.54
CPEB1-215	ENST00000617958	RTN1	Q16799	776 aa		11.7	□□□□□ -0.54
CPEB1-215	ENST00000617958	C3orf67	Q6ZVT6	689 aa		11.7	□□□□□ -0.54
CPEB1-215	ENST00000617958	OR2W6P	Q8NHA6	318 aa		11.7	□□□□□ -0.54
CPEB1-215	ENST00000617958	ACTRT1	Q8TDG2	376 aa		11.7	□□□□□ -0.54
CPEB1-215	ENST00000617958	FBF1	Q8TES7	1133 aa		11.7	□□□□□ -0.54
CPEB1-215	ENST00000617958	PSMB7	Q99436	277 aa		11.7	□□□□□ -0.54
CPEB1-215	ENST00000617958	PUS3	Q9BZE2	481 aa	Known RBP	11.7	□□□□□ -0.54
CPEB1-215	ENST00000617958	BLZF1	Q9H2G9	400 aa		11.7	□□□□□ -0.54
CPEB1-215	ENST00000617958	SALL4	Q9UJQ4	1053 aa		11.7	□□□□□ -0.54
CPEB1-215	ENST00000617958	RPL26L1	Q9UNX3	145 aa	Known RBP	11.7	□□□□□ -0.54
CPEB1-215	ENST00000617958	GDA	Q9Y2T3	454 aa		11.7	□□□□□ -0.54
CPEB1-215	ENST00000617958	PNPLA7	Q6ZV29	1317 aa		11.7	□□□□□ -0.54
CPEB1-215	ENST00000617958	BTNL10	A8MVZ5	291 aa		11.7	□□□□□ -0.54
CPEB1-215	ENST00000617958	COBL	O75128	1261 aa		11.7	□□□□□ -0.54
CPEB1-215	ENST00000617958	RHOBTB3	O94955	611 aa		11.7	□□□□□ -0.54

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