RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 SYNGAP1Q96PV0 1343 aa11.5□□□□□ -0.57
CLTCL1-209ENST00000617103 A0A0G2JND7 137 aa11.5□□□□□ -0.57
CLTCL1-209ENST00000617103 GRID2IPA4D2P6 1211 aa11.5□□□□□ -0.57
CLTCL1-209ENST00000617103 PIK3CAP42336 1068 aa11.5□□□□□ -0.57
CLTCL1-209ENST00000617103 CACNB1Q02641 598 aaPredicted RBP11.5□□□□□ -0.57
CLTCL1-209ENST00000617103 BBS9Q3SYG4 887 aa11.5□□□□□ -0.57
CLTCL1-209ENST00000617103 ASPRV1Q53RT3 343 aa11.5□□□□□ -0.57
CLTCL1-209ENST00000617103 PYROXD1Q8WU10 500 aa11.5□□□□□ -0.57
CLTCL1-209ENST00000617103 NRBF2Q96F24 287 aa11.5□□□□□ -0.57
CLTCL1-209ENST00000617103 LRRC37BQ96QE4 947 aa11.5□□□□□ -0.57
CLTCL1-209ENST00000617103 GREM2Q9H772 168 aa11.5□□□□□ -0.57
CLTCL1-209ENST00000617103 ETNK1Q9HBU6 452 aa11.5□□□□□ -0.57
CLTCL1-209ENST00000617103 GPHNQ9NQX3 736 aaPredicted RBP11.5□□□□□ -0.57
CLTCL1-209ENST00000617103 PICK1Q9NRD5 415 aa11.5□□□□□ -0.57
CLTCL1-209ENST00000617103 CEP72Q9P209 647 aa11.5□□□□□ -0.57
CLTCL1-209ENST00000617103 CCZ1BP86790 482 aa11.49□□□□□ -0.57
CLTCL1-209ENST00000617103 CCZ1P86791 482 aaPredicted RBP11.49□□□□□ -0.57
CLTCL1-209ENST00000617103 PTPN12Q05209 780 aaKnown RBP11.49□□□□□ -0.57
CLTCL1-209ENST00000617103 RAPH1Q70E73 1250 aa11.49□□□□□ -0.57
CLTCL1-209ENST00000617103 ARHGAP18Q8N392 663 aa11.49□□□□□ -0.57
CLTCL1-209ENST00000617103 CEP70Q8NHQ1 597 aa11.49□□□□□ -0.57
CLTCL1-209ENST00000617103 KIF2CQ99661 725 aa11.49□□□□□ -0.57
CLTCL1-209ENST00000617103 SH3GL3Q99963 347 aa11.49□□□□□ -0.57
CLTCL1-209ENST00000617103 CDCA7Q9BWT1 371 aaPredicted RBP11.49□□□□□ -0.57
CLTCL1-209ENST00000617103 UBE2TQ9NPD8 197 aaPredicted RBP11.49□□□□□ -0.57
CLTCL1-209ENST00000617103 PSD3Q9NYI0 1048 aa11.49□□□□□ -0.57
CLTCL1-209ENST00000617103 SEPT10Q9P0V9 454 aa11.49□□□□□ -0.57
CLTCL1-209ENST00000617103 ESYT3A0FGR9 886 aa11.49□□□□□ -0.57
CLTCL1-209ENST00000617103 RASA4BC9J798 803 aa11.49□□□□□ -0.57
CLTCL1-209ENST00000617103 ZBTB22O15209 634 aa11.49□□□□□ -0.57
CLTCL1-209ENST00000617103 RASA4O43374 803 aa11.49□□□□□ -0.57
CLTCL1-209ENST00000617103 PLS3P13797 630 aa11.49□□□□□ -0.57
CLTCL1-209ENST00000617103 ART3Q13508 389 aa11.49□□□□□ -0.57
CLTCL1-209ENST00000617103 CUL4BQ13620 913 aa11.49□□□□□ -0.57
CLTCL1-209ENST00000617103 RUBCNQ92622 972 aa11.49□□□□□ -0.57
CLTCL1-209ENST00000617103 ZMAT2Q96NC0 199 aaKnown RBP11.49□□□□□ -0.57
CLTCL1-209ENST00000617103 CXorf56Q9H5V9 222 aa11.49□□□□□ -0.57
CLTCL1-209ENST00000617103 MLXIPQ9HAP2 919 aa11.49□□□□□ -0.57
CLTCL1-209ENST00000617103 BATF3Q9NR55 127 aa11.49□□□□□ -0.57
CLTCL1-209ENST00000617103 HDAC6Q9UBN7 1215 aa11.49□□□□□ -0.57
CLTCL1-209ENST00000617103 THRAP3Q9Y2W1 955 aaKnown RBP11.49□□□□□ -0.57
CLTCL1-209ENST00000617103 A6NJR5 290 aa11.49□□□□□ -0.57
CLTCL1-209ENST00000617103 TEX33O43247 280 aa11.49□□□□□ -0.57
CLTCL1-209ENST00000617103 ACTN1P12814 892 aa11.49□□□□□ -0.57
CLTCL1-209ENST00000617103 NFRKBQ6P4R8 1299 aa11.49□□□□□ -0.57
CLTCL1-209ENST00000617103 AMNQ9BXJ7 453 aa11.49□□□□□ -0.57
CLTCL1-209ENST00000617103 ANLNQ9NQW6 1124 aa11.49□□□□□ -0.57
CLTCL1-209ENST00000617103 SMYD2Q9NRG4 433 aa11.49□□□□□ -0.57
CLTCL1-209ENST00000617103 GJB4Q9NTQ9 266 aa11.49□□□□□ -0.57
CLTCL1-209ENST00000617103 DNAJC17Q9NVM6 304 aaKnown RBP11.49□□□□□ -0.57
CLTCL1-209ENST00000617103 CLASP1Q7Z460 1538 aa11.49□□□□□ -0.57
CLTCL1-209ENST00000617103 TESPA1A2RU30 521 aaPredicted RBP11.49□□□□□ -0.57
CLTCL1-209ENST00000617103 RASSF10A6NK89 507 aa11.49□□□□□ -0.57
CLTCL1-209ENST00000617103 HNRNPDLO14979 420 aaKnown RBP11.49□□□□□ -0.57
CLTCL1-209ENST00000617103 NCF2P19878 526 aaPredicted RBP11.49□□□□□ -0.57
CLTCL1-209ENST00000617103 PMS2P54278 862 aa11.49□□□□□ -0.57
CLTCL1-209ENST00000617103 CHRNDQ07001 517 aa11.49□□□□□ -0.57
CLTCL1-209ENST00000617103 KCNV2Q8TDN2 545 aa11.49□□□□□ -0.57
CLTCL1-209ENST00000617103 DACT3Q96B18 629 aaPredicted RBP11.49□□□□□ -0.57
CLTCL1-209ENST00000617103 DYDC2Q96IM9 177 aa11.49□□□□□ -0.57
CLTCL1-209ENST00000617103 ACCSQ96QU6 501 aa11.49□□□□□ -0.57
CLTCL1-209ENST00000617103 PPARGC1AQ9UBK2 798 aaKnown RBP11.49□□□□□ -0.57
CLTCL1-209ENST00000617103 ZFP69BQ9UJL9 534 aa11.49□□□□□ -0.57
CLTCL1-209ENST00000617103 TTC26A0AVF1 554 aa11.48□□□□□ -0.57
CLTCL1-209ENST00000617103 CAPN9O14815 690 aa11.48□□□□□ -0.57
CLTCL1-209ENST00000617103 EEF1B2P24534 225 aaKnown RBP11.48□□□□□ -0.57
CLTCL1-209ENST00000617103 CRLF3Q8IUI8 442 aa11.48□□□□□ -0.57
CLTCL1-209ENST00000617103 WDR75Q8IWA0 830 aaKnown RBP11.48□□□□□ -0.57
CLTCL1-209ENST00000617103 THOC1Q96FV9 657 aaKnown RBP11.48□□□□□ -0.57
CLTCL1-209ENST00000617103 CCDC68Q9H2F9 335 aa11.48□□□□□ -0.57
CLTCL1-209ENST00000617103 TMEM206Q9H813 350 aa11.48□□□□□ -0.57
CLTCL1-209ENST00000617103 MID2Q9UJV3 735 aa11.48□□□□□ -0.57
CLTCL1-209ENST00000617103 LRRC53A6NM62 1247 aa11.48□□□□□ -0.57
CLTCL1-209ENST00000617103 EEF1DP29692 281 aaKnown RBP11.48□□□□□ -0.57
CLTCL1-209ENST00000617103 CA8P35219 290 aa11.48□□□□□ -0.57
CLTCL1-209ENST00000617103 MXI1P50539 228 aa11.48□□□□□ -0.57
CLTCL1-209ENST00000617103 MDM2Q00987 491 aaPredicted RBP11.48□□□□□ -0.57
CLTCL1-209ENST00000617103 SLFN13Q68D06 897 aa11.48□□□□□ -0.57
CLTCL1-209ENST00000617103 SRRM1Q8IYB3 904 aaKnown RBP11.48□□□□□ -0.57
CLTCL1-209ENST00000617103 SPATA4Q8NEY3 305 aa11.48□□□□□ -0.57
CLTCL1-209ENST00000617103 GLG1Q92896 1179 aa11.48□□□□□ -0.57
CLTCL1-209ENST00000617103 OSBPL1AQ9BXW6 950 aa11.48□□□□□ -0.57
CLTCL1-209ENST00000617103 KIF21AQ7Z4S6 1674 aa11.48□□□□□ -0.57
CLTCL1-209ENST00000617103 IQCB1Q15051 598 aa11.48□□□□□ -0.57
CLTCL1-209ENST00000617103 MUM1L1Q5H9M0 696 aa11.48□□□□□ -0.57
CLTCL1-209ENST00000617103 PCGF5Q86SE9 256 aa11.48□□□□□ -0.57
CLTCL1-209ENST00000617103 CFLARO15519 480 aa11.48□□□□□ -0.57
CLTCL1-209ENST00000617103 KRT37O76014 449 aa11.48□□□□□ -0.57
CLTCL1-209ENST00000617103 HAUS5O94927 633 aa11.48□□□□□ -0.57
CLTCL1-209ENST00000617103 PLA2G4BP0C869 781 aa11.48□□□□□ -0.57
CLTCL1-209ENST00000617103 GUCY1A3Q02108 690 aa11.48□□□□□ -0.57
CLTCL1-209ENST00000617103 CAV1Q03135 178 aa11.48□□□□□ -0.57
CLTCL1-209ENST00000617103 CDC37Q16543 378 aaPredicted RBP11.48□□□□□ -0.57
CLTCL1-209ENST00000617103 EPM2AIP1Q7L775 607 aaPredicted RBP11.48□□□□□ -0.57
CLTCL1-209ENST00000617103 MMS19Q96T76 1030 aa11.48□□□□□ -0.57
CLTCL1-209ENST00000617103 UPF3AQ9H1J1 476 aaKnown RBP11.48□□□□□ -0.57
CLTCL1-209ENST00000617103 BTG4Q9NY30 223 aa11.48□□□□□ -0.57
CLTCL1-209ENST00000617103 TLK1Q9UKI8 766 aa11.48□□□□□ -0.57
CLTCL1-209ENST00000617103 ARHGAP31Q2M1Z3 1444 aa11.48□□□□□ -0.57
CLTCL1-209ENST00000617103 RAD23BP54727 409 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms