RNA–Protein interactions for RNA: ENST00000616527.4

MALAT1-208, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 3 BASIC

Gene MALAT1, Length 572 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-208ENST00000616527 ELOAQ14241 798 aaKnown RBP8.86□□□□□ -0.99
MALAT1-208ENST00000616527 TLR1Q15399 786 aa8.86□□□□□ -0.99
MALAT1-208ENST00000616527 CCDC96Q2M329 555 aa8.86□□□□□ -0.99
MALAT1-208ENST00000616527 SPECC1Q5M775 1068 aa8.86□□□□□ -0.99
MALAT1-208ENST00000616527 TMEM164Q5U3C3 297 aa8.86□□□□□ -0.99
MALAT1-208ENST00000616527 CNNM4Q6P4Q7 775 aa8.86□□□□□ -0.99
MALAT1-208ENST00000616527 HOMER1Q86YM7 354 aa8.86□□□□□ -0.99
MALAT1-208ENST00000616527 RASGRP4Q8TDF6 673 aa8.86□□□□□ -0.99
MALAT1-208ENST00000616527 TBCKQ8TEA7 893 aa8.86□□□□□ -0.99
MALAT1-208ENST00000616527 PIBF1Q8WXW3 757 aa8.86□□□□□ -0.99
MALAT1-208ENST00000616527 AMNQ9BXJ7 453 aa8.86□□□□□ -0.99
MALAT1-208ENST00000616527 RAB34Q9BZG1 259 aa8.86□□□□□ -0.99
MALAT1-208ENST00000616527 DEFB129Q9H1M3 183 aa8.86□□□□□ -0.99
MALAT1-208ENST00000616527 HSD3B7Q9H2F3 369 aa8.86□□□□□ -0.99
MALAT1-208ENST00000616527 TMEM60Q9H2L4 133 aa8.86□□□□□ -0.99
MALAT1-208ENST00000616527 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.86□□□□□ -0.99
MALAT1-208ENST00000616527 VAT1LQ9HCJ6 419 aa8.86□□□□□ -0.99
MALAT1-208ENST00000616527 DISC1Q9NRI5 854 aa8.86□□□□□ -0.99
MALAT1-208ENST00000616527 SPTLC3Q9NUV7 552 aa8.86□□□□□ -0.99
MALAT1-208ENST00000616527 KBTBD4Q9NVX7 518 aa8.86□□□□□ -0.99
MALAT1-208ENST00000616527 NOVA2Q9UNW9 492 aaKnown RBP8.86□□□□□ -0.99
MALAT1-208ENST00000616527 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.86□□□□□ -0.99
MALAT1-208ENST00000616527 SIPA1L1O43166 1804 aa8.86□□□□□ -0.99
MALAT1-208ENST00000616527 BAZ2BQ9UIF8 2168 aaKnown RBP8.86□□□□□ -0.99
MALAT1-208ENST00000616527 COL4A5P29400 1685 aa8.85□□□□□ -0.99
MALAT1-208ENST00000616527 USP17L15C9J2P7 530 aa8.85□□□□□ -0.99
MALAT1-208ENST00000616527 USP17L10C9JJH3 530 aa8.85□□□□□ -0.99
MALAT1-208ENST00000616527 USP17L13C9JLJ4 530 aa8.85□□□□□ -0.99
MALAT1-208ENST00000616527 USP17L11C9JVI0 530 aa8.85□□□□□ -0.99
MALAT1-208ENST00000616527 USP17L18D6R9N7 530 aa8.85□□□□□ -0.99
MALAT1-208ENST00000616527 USP17L22D6RA61 530 aa8.85□□□□□ -0.99
MALAT1-208ENST00000616527 USP17L17D6RBQ6 530 aa8.85□□□□□ -0.99
MALAT1-208ENST00000616527 USP17L19D6RCP7 530 aa8.85□□□□□ -0.99
MALAT1-208ENST00000616527 USP17L20D6RJB6 530 aa8.85□□□□□ -0.99
MALAT1-208ENST00000616527 FZD9O00144 591 aa8.85□□□□□ -0.99
MALAT1-208ENST00000616527 NFKBIEO00221 500 aa8.85□□□□□ -0.99
MALAT1-208ENST00000616527 TBX3O15119 743 aa8.85□□□□□ -0.99
MALAT1-208ENST00000616527 EDIL3O43854 480 aa8.85□□□□□ -0.99
MALAT1-208ENST00000616527 PPP1R11O60927 126 aaPredicted RBP8.85□□□□□ -0.99
MALAT1-208ENST00000616527 OFD1O75665 1012 aa8.85□□□□□ -0.99
MALAT1-208ENST00000616527 GH2P01242 217 aa8.85□□□□□ -0.99
MALAT1-208ENST00000616527 ASNSP08243 561 aa8.85□□□□□ -0.99
MALAT1-208ENST00000616527 BMP3P12645 472 aa8.85□□□□□ -0.99
MALAT1-208ENST00000616527 ZNF18P17022 549 aa8.85□□□□□ -0.99
MALAT1-208ENST00000616527 KCNJ6P48051 423 aa8.85□□□□□ -0.99
MALAT1-208ENST00000616527 EIF6P56537 245 aaKnown RBP8.85□□□□□ -0.99
MALAT1-208ENST00000616527 SRSF11Q05519 484 aaKnown RBP8.85□□□□□ -0.99
MALAT1-208ENST00000616527 USP17L24Q0WX57 530 aa8.85□□□□□ -0.99
MALAT1-208ENST00000616527 QRICH1Q2TAL8 776 aa8.85□□□□□ -0.99
MALAT1-208ENST00000616527 EML3Q32P44 896 aa8.85□□□□□ -0.99
MALAT1-208ENST00000616527 C4orf17Q53FE4 359 aa8.85□□□□□ -0.99
MALAT1-208ENST00000616527 COBLL1Q53SF7 1204 aa8.85□□□□□ -0.99
MALAT1-208ENST00000616527 SYDE2Q5VT97 1194 aa8.85□□□□□ -0.99
MALAT1-208ENST00000616527 ZNF385CQ66K41 422 aaPredicted RBP8.85□□□□□ -0.99
MALAT1-208ENST00000616527 TTBK2Q6IQ55 1244 aa8.85□□□□□ -0.99
MALAT1-208ENST00000616527 FAM160B2Q86V87 743 aa8.85□□□□□ -0.99
MALAT1-208ENST00000616527 KIAA1524Q8TCG1 905 aa8.85□□□□□ -0.99
MALAT1-208ENST00000616527 RHBDD1Q8TEB9 315 aa8.85□□□□□ -0.99
MALAT1-208ENST00000616527 CRYGNQ8WXF5 182 aa8.85□□□□□ -0.99
MALAT1-208ENST00000616527 ERCC4Q92889 916 aaPredicted RBP8.85□□□□□ -0.99
MALAT1-208ENST00000616527 GTPBP3Q969Y2 492 aaKnown RBP8.85□□□□□ -0.99
MALAT1-208ENST00000616527 DHX58Q96C10 678 aa8.85□□□□□ -0.99
MALAT1-208ENST00000616527 NUCKS1Q9H1E3 243 aaKnown RBP8.85□□□□□ -0.99
MALAT1-208ENST00000616527 CPVLQ9H3G5 476 aa8.85□□□□□ -0.99
MALAT1-208ENST00000616527 PSTPIP2Q9H939 334 aa8.85□□□□□ -0.99
MALAT1-208ENST00000616527 KCND1Q9NSA2 647 aa8.85□□□□□ -0.99
MALAT1-208ENST00000616527 PNMA2Q9UL42 364 aa8.85□□□□□ -0.99
MALAT1-208ENST00000616527 FAM196BA6NMK8 535 aa8.84□□□□□ -0.99
MALAT1-208ENST00000616527 GPR25O00155 361 aa8.84□□□□□ -0.99
MALAT1-208ENST00000616527 BIN1O00499 593 aa8.84□□□□□ -0.99
MALAT1-208ENST00000616527 WNT10BO00744 389 aa8.84□□□□□ -0.99
MALAT1-208ENST00000616527 FOXN1O15353 648 aa8.84□□□□□ -0.99
MALAT1-208ENST00000616527 CCNT1O60563 726 aaKnown RBP8.84□□□□□ -0.99
MALAT1-208ENST00000616527 CIITAP33076 1130 aa8.84□□□□□ -0.99
MALAT1-208ENST00000616527 CAP2P40123 477 aa8.84□□□□□ -0.99
MALAT1-208ENST00000616527 AMPD3Q01432 767 aa8.84□□□□□ -0.99
MALAT1-208ENST00000616527 PTK7Q13308 1070 aa8.84□□□□□ -0.99
MALAT1-208ENST00000616527 CUL4BQ13620 913 aa8.84□□□□□ -0.99
MALAT1-208ENST00000616527 CDC37Q16543 378 aaPredicted RBP8.84□□□□□ -0.99
MALAT1-208ENST00000616527 TMEM266Q2M3C6 531 aa8.84□□□□□ -0.99
MALAT1-208ENST00000616527 LETM2Q2VYF4 491 aa8.84□□□□□ -0.99
MALAT1-208ENST00000616527 NAALADL2Q58DX5 795 aa8.84□□□□□ -0.99
MALAT1-208ENST00000616527 HYIQ5T013 277 aa8.84□□□□□ -0.99
MALAT1-208ENST00000616527 SPATA1Q5VX52 437 aa8.84□□□□□ -0.99
MALAT1-208ENST00000616527 RRAGBQ5VZM2 374 aa8.84□□□□□ -0.99
MALAT1-208ENST00000616527 FOXR2Q6PJQ5 311 aa8.84□□□□□ -0.99
MALAT1-208ENST00000616527 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.84□□□□□ -0.99
MALAT1-208ENST00000616527 KCTD1Q719H9 257 aa8.84□□□□□ -0.99
MALAT1-208ENST00000616527 RASGRP2Q7LDG7 609 aa8.84□□□□□ -0.99
MALAT1-208ENST00000616527 CLEC10AQ8IUN9 316 aa8.84□□□□□ -0.99
MALAT1-208ENST00000616527 SAMD3Q8N6K7 520 aa8.84□□□□□ -0.99
MALAT1-208ENST00000616527 PDILTQ8N807 584 aa8.84□□□□□ -0.99
MALAT1-208ENST00000616527 CHURC1Q8WUH1 139 aa8.84□□□□□ -0.99
MALAT1-208ENST00000616527 COA7Q96BR5 231 aa8.84□□□□□ -0.99
MALAT1-208ENST00000616527 HOOK2Q96ED9 719 aa8.84□□□□□ -0.99
MALAT1-208ENST00000616527 TRERF1Q96PN7 1200 aa8.84□□□□□ -0.99
MALAT1-208ENST00000616527 C7orf25Q9BPX7 421 aa8.84□□□□□ -0.99
MALAT1-208ENST00000616527 LRRC27Q9C0I9 530 aa8.84□□□□□ -0.99
MALAT1-208ENST00000616527 MAF1Q9H063 256 aa8.84□□□□□ -0.99
MALAT1-208ENST00000616527 VCPKMTQ9H867 229 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms