RNA–Protein interactions for RNA: ENST00000616325.1

PCDHA11-202, Transcript of protocadherin alpha 11, humanhuman

APPRIS ALT2 BASIC

Gene PCDHA11, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-202ENST00000616325 RUFY4Q6ZNE9 571 aa14.67□□□□□ -0.06
PCDHA11-202ENST00000616325 SV2BQ7L1I2 683 aa14.67□□□□□ -0.06
PCDHA11-202ENST00000616325 SNX29Q8TEQ0 813 aa14.67□□□□□ -0.06
PCDHA11-202ENST00000616325 TBC1D22AQ8WUA7 517 aa14.67□□□□□ -0.06
PCDHA11-202ENST00000616325 ADAMTS1Q9UHI8 967 aa14.67□□□□□ -0.06
PCDHA11-202ENST00000616325 USP54Q70EL1 1684 aa14.67□□□□□ -0.06
PCDHA11-202ENST00000616325 DAPK3O43293 454 aa14.66□□□□□ -0.06
PCDHA11-202ENST00000616325 TDP2O95551 362 aa14.66□□□□□ -0.06
PCDHA11-202ENST00000616325 NONOQ15233 471 aaKnown RBP eCLIP14.66□□□□□ -0.06
PCDHA11-202ENST00000616325 TCERG1LQ5VWI1 586 aa14.66□□□□□ -0.06
PCDHA11-202ENST00000616325 KIAA0895Q8NCT3 520 aa14.66□□□□□ -0.06
PCDHA11-202ENST00000616325 SEMA6BQ9H3T3 888 aa14.66□□□□□ -0.06
PCDHA11-202ENST00000616325 PANK4Q9NVE7 773 aa14.66□□□□□ -0.06
PCDHA11-202ENST00000616325 PNMA2Q9UL42 364 aa14.66□□□□□ -0.06
PCDHA11-202ENST00000616325 ZNF335Q9H4Z2 1342 aaPredicted RBP14.66□□□□□ -0.06
PCDHA11-202ENST00000616325 SLCO1A2P46721 670 aa14.66□□□□□ -0.06
PCDHA11-202ENST00000616325 TRAPPC10P48553 1259 aa14.66□□□□□ -0.06
PCDHA11-202ENST00000616325 RPS8P62241 208 aaKnown RBP14.66□□□□□ -0.06
PCDHA11-202ENST00000616325 UBE2SQ16763 222 aa14.66□□□□□ -0.06
PCDHA11-202ENST00000616325 NBPF9Q3BBW0 867 aa14.66□□□□□ -0.06
PCDHA11-202ENST00000616325 TRMT1LQ7Z2T5 733 aaKnown RBP14.66□□□□□ -0.06
PCDHA11-202ENST00000616325 FAM114A1Q8IWE2 563 aa14.66□□□□□ -0.06
PCDHA11-202ENST00000616325 WHAMMQ8TF30 809 aa14.66□□□□□ -0.06
PCDHA11-202ENST00000616325 DYDC1Q8WWB3 177 aa14.66□□□□□ -0.06
PCDHA11-202ENST00000616325 TBC1D5Q92609 795 aa14.66□□□□□ -0.06
PCDHA11-202ENST00000616325 TMEM47Q9BQJ4 181 aa14.66□□□□□ -0.06
PCDHA11-202ENST00000616325 ARL6IP4Q66PJ3 421 aaKnown RBP14.66□□□□□ -0.06
PCDHA11-202ENST00000616325 C4orf32Q8N8J7 132 aa14.66□□□□□ -0.06
PCDHA11-202ENST00000616325 ZNF483Q8TF39 744 aaPredicted RBP14.66□□□□□ -0.06
PCDHA11-202ENST00000616325 MYH6P13533 1939 aa14.66□□□□□ -0.06
PCDHA11-202ENST00000616325 SPEF2Q9C093 1822 aa14.66□□□□□ -0.06
PCDHA11-202ENST00000616325 RHOBTB3O94955 611 aa14.65□□□□□ -0.06
PCDHA11-202ENST00000616325 LDHBP07195 334 aaKnown RBP14.65□□□□□ -0.06
PCDHA11-202ENST00000616325 ERVK-9P63128 1117 aa14.65□□□□□ -0.06
PCDHA11-202ENST00000616325 ZNF844Q08AG5 666 aa14.65□□□□□ -0.06
PCDHA11-202ENST00000616325 DRP2Q13474 957 aa14.65□□□□□ -0.06
PCDHA11-202ENST00000616325 NUDT12Q9BQG2 462 aa14.65□□□□□ -0.06
PCDHA11-202ENST00000616325 TAF1DQ9H5J8 278 aaPredicted RBP14.65□□□□□ -0.06
PCDHA11-202ENST00000616325 GDF3Q9NR23 364 aa14.65□□□□□ -0.06
PCDHA11-202ENST00000616325 AMACRQ9UHK6 382 aa14.65□□□□□ -0.06
PCDHA11-202ENST00000616325 ANAPC4Q9UJX5 808 aa14.65□□□□□ -0.06
PCDHA11-202ENST00000616325 SLURP2P0DP57 97 aa14.65□□□□□ -0.06
PCDHA11-202ENST00000616325 KLRC1P26715 233 aa14.65□□□□□ -0.06
PCDHA11-202ENST00000616325 SLC35G1Q2M3R5 365 aa14.65□□□□□ -0.06
PCDHA11-202ENST00000616325 PARP10Q53GL7 1025 aa14.65□□□□□ -0.06
PCDHA11-202ENST00000616325 FAM133AQ8N9E0 248 aa14.65□□□□□ -0.06
PCDHA11-202ENST00000616325 MLXIPLQ9NP71 852 aa14.65□□□□□ -0.06
PCDHA11-202ENST00000616325 ZNF652Q9Y2D9 606 aa14.65□□□□□ -0.06
PCDHA11-202ENST00000616325 THRAP3Q9Y2W1 955 aaKnown RBP14.65□□□□□ -0.06
PCDHA11-202ENST00000616325 NPHP3-ACAD11A0A0J9YXS1 232 aa14.64□□□□□ -0.07
PCDHA11-202ENST00000616325 MYMKA6NI61 221 aa14.64□□□□□ -0.07
PCDHA11-202ENST00000616325 CALCRLQ16602 461 aa14.64□□□□□ -0.07
PCDHA11-202ENST00000616325 VWA3BQ502W6 1294 aa14.64□□□□□ -0.07
PCDHA11-202ENST00000616325 CNNM4Q6P4Q7 775 aa14.64□□□□□ -0.07
PCDHA11-202ENST00000616325 AGAP11Q8TF27 550 aa14.64□□□□□ -0.07
PCDHA11-202ENST00000616325 LRRC45Q96CN5 670 aa14.64□□□□□ -0.07
PCDHA11-202ENST00000616325 PACSIN1Q9BY11 444 aa14.64□□□□□ -0.07
PCDHA11-202ENST00000616325 SAMD15Q9P1V8 674 aa14.64□□□□□ -0.07
PCDHA11-202ENST00000616325 MAD2L2Q9UI95 211 aa14.64□□□□□ -0.07
PCDHA11-202ENST00000616325 PLAGL2Q9UPG8 496 aa14.64□□□□□ -0.07
PCDHA11-202ENST00000616325 CCT8L1PA6NM43 557 aa14.64□□□□□ -0.07
PCDHA11-202ENST00000616325 AMPD3Q01432 767 aa14.64□□□□□ -0.07
PCDHA11-202ENST00000616325 UBE4AQ14139 1066 aa14.64□□□□□ -0.07
PCDHA11-202ENST00000616325 RPS6KA1Q15418 735 aa14.64□□□□□ -0.07
PCDHA11-202ENST00000616325 MIIPQ5JXC2 388 aa14.64□□□□□ -0.07
PCDHA11-202ENST00000616325 NEK8Q86SG6 692 aa14.64□□□□□ -0.07
PCDHA11-202ENST00000616325 SPICE1Q8N0Z3 855 aa14.64□□□□□ -0.07
PCDHA11-202ENST00000616325 LSM14BQ9BX40 385 aaKnown RBP14.64□□□□□ -0.07
PCDHA11-202ENST00000616325 CELF4Q9BZC1 486 aaKnown RBP14.64□□□□□ -0.07
PCDHA11-202ENST00000616325 LRRC4CQ9HCJ2 640 aa14.64□□□□□ -0.07
PCDHA11-202ENST00000616325 KBTBD4Q9NVX7 518 aa14.64□□□□□ -0.07
PCDHA11-202ENST00000616325 ARPP21Q9UBL0 812 aaPredicted RBP14.64□□□□□ -0.07
PCDHA11-202ENST00000616325 TRPC6Q9Y210 931 aa14.64□□□□□ -0.07
PCDHA11-202ENST00000616325 TRPM3Q9HCF6 1732 aaPredicted RBP14.64□□□□□ -0.07
PCDHA11-202ENST00000616325 PHRF1Q9P1Y6 1649 aaKnown RBP14.64□□□□□ -0.07
PCDHA11-202ENST00000616325 COL1A1P02452 1464 aaPredicted RBP14.64□□□□□ -0.07
PCDHA11-202ENST00000616325 MPHOSPH10O00566 681 aaKnown RBP14.64□□□□□ -0.07
PCDHA11-202ENST00000616325 SLC16A2P36021 539 aa14.64□□□□□ -0.07
PCDHA11-202ENST00000616325 BZW1Q7L1Q6 419 aaKnown RBP14.64□□□□□ -0.07
PCDHA11-202ENST00000616325 REXO1Q8N1G1 1221 aaKnown RBP14.64□□□□□ -0.07
PCDHA11-202ENST00000616325 MARCH10Q8NA82 808 aaPredicted RBP14.64□□□□□ -0.07
PCDHA11-202ENST00000616325 RETREG2Q8NC44 543 aa14.64□□□□□ -0.07
PCDHA11-202ENST00000616325 DHTKD1Q96HY7 919 aaPredicted RBP14.64□□□□□ -0.07
PCDHA11-202ENST00000616325 PURBQ96QR8 312 aaKnown RBP14.64□□□□□ -0.07
PCDHA11-202ENST00000616325 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.64□□□□□ -0.07
PCDHA11-202ENST00000616325 IRAK4Q9NWZ3 460 aa14.64□□□□□ -0.07
PCDHA11-202ENST00000616325 A8MUI8 341 aa14.63□□□□□ -0.07
PCDHA11-202ENST00000616325 RTN2O75298 545 aa14.63□□□□□ -0.07
PCDHA11-202ENST00000616325 MMEP08473 750 aa14.63□□□□□ -0.07
PCDHA11-202ENST00000616325 KCNJ2P63252 427 aa14.63□□□□□ -0.07
PCDHA11-202ENST00000616325 TBC1D9BQ66K14 1250 aa14.63□□□□□ -0.07
PCDHA11-202ENST00000616325 CHMP6Q96FZ7 201 aa14.63□□□□□ -0.07
PCDHA11-202ENST00000616325 EYA3Q99504 573 aa14.63□□□□□ -0.07
PCDHA11-202ENST00000616325 LBHD1Q9BQE6 289 aaPredicted RBP14.63□□□□□ -0.07
PCDHA11-202ENST00000616325 C6orf50Q9HD87 102 aa14.63□□□□□ -0.07
PCDHA11-202ENST00000616325 SEPT11Q9NVA2 429 aaKnown RBP14.63□□□□□ -0.07
PCDHA11-202ENST00000616325 STXBP3O00186 592 aa14.63□□□□□ -0.07
PCDHA11-202ENST00000616325 KRIT1O00522 736 aa14.63□□□□□ -0.07
PCDHA11-202ENST00000616325 RCAN1P53805 252 aa14.63□□□□□ -0.07
PCDHA11-202ENST00000616325 CCDC38Q502W7 563 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms