RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 CLIC2O15247 247 aa10.31□□□□□ -0.76
CLTCL1-208ENST00000615606 ACTN4O43707 911 aaKnown RBP10.31□□□□□ -0.76
CLTCL1-208ENST00000615606 OPA1O60313 960 aa10.31□□□□□ -0.76
CLTCL1-208ENST00000615606 STAM2O75886 525 aa10.31□□□□□ -0.76
CLTCL1-208ENST00000615606 SMARCA1P28370 1054 aa10.31□□□□□ -0.76
CLTCL1-208ENST00000615606 HOXA10P31260 410 aaPredicted RBP10.31□□□□□ -0.76
CLTCL1-208ENST00000615606 EPHX2P34913 555 aa10.31□□□□□ -0.76
CLTCL1-208ENST00000615606 DDIT3P35638 169 aa10.31□□□□□ -0.76
CLTCL1-208ENST00000615606 ADKP55263 362 aaKnown RBP10.31□□□□□ -0.76
CLTCL1-208ENST00000615606 PEX3P56589 373 aa10.31□□□□□ -0.76
CLTCL1-208ENST00000615606 MYO1EQ12965 1108 aa10.31□□□□□ -0.76
CLTCL1-208ENST00000615606 KMT5BQ4FZB7 885 aa10.31□□□□□ -0.76
CLTCL1-208ENST00000615606 PRAMEF18Q5VWM3 479 aa10.31□□□□□ -0.76
CLTCL1-208ENST00000615606 PPP1R2P3Q6NXS1 205 aa10.31□□□□□ -0.76
CLTCL1-208ENST00000615606 PADI6Q6TGC4 694 aa10.31□□□□□ -0.76
CLTCL1-208ENST00000615606 GABPB2Q8TAK5 448 aaPredicted RBP10.31□□□□□ -0.76
CLTCL1-208ENST00000615606 CHAMP1Q96JM3 812 aa10.31□□□□□ -0.76
CLTCL1-208ENST00000615606 ZFP91Q96JP5 570 aaPredicted RBP10.31□□□□□ -0.76
CLTCL1-208ENST00000615606 SPATA33Q96N06 139 aa10.31□□□□□ -0.76
CLTCL1-208ENST00000615606 PSMD1Q99460 953 aa10.31□□□□□ -0.76
CLTCL1-208ENST00000615606 PRR12Q9ULL5 1215 aa10.31□□□□□ -0.76
CLTCL1-208ENST00000615606 NDC80O14777 642 aa10.31□□□□□ -0.76
CLTCL1-208ENST00000615606 CEP55Q53EZ4 464 aa10.31□□□□□ -0.76
CLTCL1-208ENST00000615606 ZBTB33Q86T24 672 aa10.31□□□□□ -0.76
CLTCL1-208ENST00000615606 C7orf31Q8N865 590 aa10.31□□□□□ -0.76
CLTCL1-208ENST00000615606 BANK1Q8NDB2 785 aa10.31□□□□□ -0.76
CLTCL1-208ENST00000615606 PSPC1Q8WXF1 523 aaKnown RBP10.31□□□□□ -0.76
CLTCL1-208ENST00000615606 PRMT6Q96LA8 375 aaPredicted RBP10.31□□□□□ -0.76
CLTCL1-208ENST00000615606 AMFRQ9UKV5 643 aa10.31□□□□□ -0.76
CLTCL1-208ENST00000615606 PCDHB4Q9Y5E5 795 aa10.31□□□□□ -0.76
CLTCL1-208ENST00000615606 CEP104O60308 925 aa10.31□□□□□ -0.76
CLTCL1-208ENST00000615606 NSFP46459 744 aaKnown RBP10.31□□□□□ -0.76
CLTCL1-208ENST00000615606 DDR1Q08345 913 aa10.31□□□□□ -0.76
CLTCL1-208ENST00000615606 LONRF3Q496Y0 759 aa10.31□□□□□ -0.76
CLTCL1-208ENST00000615606 PIGOQ8TEQ8 1089 aa10.31□□□□□ -0.76
CLTCL1-208ENST00000615606 IFT81Q8WYA0 676 aa10.31□□□□□ -0.76
CLTCL1-208ENST00000615606 DYDC2Q96IM9 177 aa10.31□□□□□ -0.76
CLTCL1-208ENST00000615606 MSTO1Q9BUK6 570 aa10.31□□□□□ -0.76
CLTCL1-208ENST00000615606 THAP9Q9H5L6 903 aa10.31□□□□□ -0.76
CLTCL1-208ENST00000615606 GABBR1Q9UBS5 961 aa10.31□□□□□ -0.76
CLTCL1-208ENST00000615606 H2AFZP0C0S5 128 aa10.3□□□□□ -0.76
CLTCL1-208ENST00000615606 PDHBP11177 359 aa10.3□□□□□ -0.76
CLTCL1-208ENST00000615606 CASP7P55210 303 aa10.3□□□□□ -0.76
CLTCL1-208ENST00000615606 TNFAIP2Q03169 654 aa10.3□□□□□ -0.76
CLTCL1-208ENST00000615606 MAPK6Q16659 721 aa10.3□□□□□ -0.76
CLTCL1-208ENST00000615606 H2AFVQ71UI9 128 aa10.3□□□□□ -0.76
CLTCL1-208ENST00000615606 POTEDQ86YR6 584 aa10.3□□□□□ -0.76
CLTCL1-208ENST00000615606 ENOX1Q8TC92 643 aaKnown RBP10.3□□□□□ -0.76
CLTCL1-208ENST00000615606 C2orf40Q9H1Z8 148 aa10.3□□□□□ -0.76
CLTCL1-208ENST00000615606 SALL1Q9NSC2 1324 aa10.3□□□□□ -0.76
CLTCL1-208ENST00000615606 ZNF233A6NK53 670 aa10.3□□□□□ -0.76
CLTCL1-208ENST00000615606 CCDC25Q86WR0 208 aa10.3□□□□□ -0.76
CLTCL1-208ENST00000615606 SMYD4Q8IYR2 804 aaPredicted RBP10.3□□□□□ -0.76
CLTCL1-208ENST00000615606 RAD54LQ92698 747 aa10.3□□□□□ -0.76
CLTCL1-208ENST00000615606 MTRQ99707 1265 aa10.3□□□□□ -0.76
CLTCL1-208ENST00000615606 ABCB4P21439 1286 aa10.3□□□□□ -0.76
CLTCL1-208ENST00000615606 CLCN1P35523 988 aa10.3□□□□□ -0.76
CLTCL1-208ENST00000615606 MXI1P50539 228 aa10.3□□□□□ -0.76
CLTCL1-208ENST00000615606 RASSF7Q02833 373 aa10.3□□□□□ -0.76
CLTCL1-208ENST00000615606 NFX1Q12986 1120 aaKnown RBP10.3□□□□□ -0.76
CLTCL1-208ENST00000615606 EPHA7Q15375 998 aa10.3□□□□□ -0.76
CLTCL1-208ENST00000615606 DPCR1Q3MIW9 517 aa10.3□□□□□ -0.76
CLTCL1-208ENST00000615606 KIAA1841Q6NSI8 718 aa10.3□□□□□ -0.76
CLTCL1-208ENST00000615606 SWSAP1Q6NVH7 229 aa10.3□□□□□ -0.76
CLTCL1-208ENST00000615606 CHST13Q8NET6 341 aa10.3□□□□□ -0.76
CLTCL1-208ENST00000615606 KIAA1586Q9HCI6 787 aa10.3□□□□□ -0.76
CLTCL1-208ENST00000615606 PCDHA10Q9Y5I2 948 aa10.3□□□□□ -0.76
CLTCL1-208ENST00000615606 PFASO15067 1338 aa10.3□□□□□ -0.76
CLTCL1-208ENST00000615606 BAATQ14032 418 aaPredicted RBP10.29□□□□□ -0.76
CLTCL1-208ENST00000615606 C8orf74Q6P047 294 aa10.29□□□□□ -0.76
CLTCL1-208ENST00000615606 PPP1R16BQ96T49 567 aa10.29□□□□□ -0.76
CLTCL1-208ENST00000615606 SLC9A2Q9UBY0 812 aa10.29□□□□□ -0.76
CLTCL1-208ENST00000615606 FAM205AQ6ZU69 1335 aa10.29□□□□□ -0.76
CLTCL1-208ENST00000615606 MED1Q15648 1581 aaPredicted RBP10.29□□□□□ -0.76
CLTCL1-208ENST00000615606 PVALEFA0A1B0GWK0 134 aa10.29□□□□□ -0.76
CLTCL1-208ENST00000615606 STAMBPO95630 424 aa10.29□□□□□ -0.76
CLTCL1-208ENST00000615606 GTF2A2P52657 109 aa10.29□□□□□ -0.76
CLTCL1-208ENST00000615606 CLEC10AQ8IUN9 316 aa10.29□□□□□ -0.76
CLTCL1-208ENST00000615606 GPRC5AQ8NFJ5 357 aa10.29□□□□□ -0.76
CLTCL1-208ENST00000615606 TRIM11Q96F44 468 aa10.29□□□□□ -0.76
CLTCL1-208ENST00000615606 TOPORSQ9NS56 1045 aaPredicted RBP10.29□□□□□ -0.76
CLTCL1-208ENST00000615606 SEL1LQ9UBV2 794 aa10.29□□□□□ -0.76
CLTCL1-208ENST00000615606 ATP8B3O60423 1300 aa10.29□□□□□ -0.76
CLTCL1-208ENST00000615606 ZBTB24O43167 697 aaPredicted RBP10.29□□□□□ -0.76
CLTCL1-208ENST00000615606 ABL1P00519 1130 aa10.29□□□□□ -0.76
CLTCL1-208ENST00000615606 VEGFAP15692 232 aaPredicted RBP10.29□□□□□ -0.76
CLTCL1-208ENST00000615606 CAP2P40123 477 aa10.29□□□□□ -0.76
CLTCL1-208ENST00000615606 TERF1P54274 439 aa10.29□□□□□ -0.76
CLTCL1-208ENST00000615606 TRIM58Q8NG06 486 aa10.29□□□□□ -0.76
CLTCL1-208ENST00000615606 EHD4Q9H223 541 aa10.29□□□□□ -0.76
CLTCL1-208ENST00000615606 FEZ2Q9UHY8 353 aaPredicted RBP10.29□□□□□ -0.76
CLTCL1-208ENST00000615606 TDP2O95551 362 aa10.29□□□□□ -0.76
CLTCL1-208ENST00000615606 RHOXF2BP0C7M4 288 aa10.29□□□□□ -0.76
CLTCL1-208ENST00000615606 TXNP10599 105 aaKnown RBP10.29□□□□□ -0.76
CLTCL1-208ENST00000615606 CFAP58Q5T655 872 aa10.29□□□□□ -0.76
CLTCL1-208ENST00000615606 C3orf67Q6ZVT6 689 aa10.29□□□□□ -0.76
CLTCL1-208ENST00000615606 PDZD4Q76G19 769 aaPredicted RBP10.29□□□□□ -0.76
CLTCL1-208ENST00000615606 RHOXF2Q9BQY4 288 aa10.29□□□□□ -0.76
CLTCL1-208ENST00000615606 RAB20Q9NX57 234 aa10.29□□□□□ -0.76
CLTCL1-208ENST00000615606 UTP11Q9Y3A2 253 aaKnown RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms