RNA–Protein interactions for RNA: ENST00000614659.1

SNPH-203, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,354 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-203ENST00000614659 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.99■□□□□ 0.15
SNPH-203ENST00000614659 KCNH4Q9UQ05 1017 aa15.99■□□□□ 0.15
SNPH-203ENST00000614659 ZNF609O15014 1411 aa15.99■□□□□ 0.15
SNPH-203ENST00000614659 SLC26A4O43511 780 aa15.99■□□□□ 0.15
SNPH-203ENST00000614659 PLA2G4BP0C869 781 aa15.99■□□□□ 0.15
SNPH-203ENST00000614659 SF3B3Q15393 1217 aaKnown RBP15.99■□□□□ 0.15
SNPH-203ENST00000614659 MIGA2Q7L4E1 593 aa15.99■□□□□ 0.15
SNPH-203ENST00000614659 METTL23Q86XA0 190 aa15.99■□□□□ 0.15
SNPH-203ENST00000614659 RUBCNQ92622 972 aa15.99■□□□□ 0.15
SNPH-203ENST00000614659 KRT15P19012 456 aa15.99■□□□□ 0.15
SNPH-203ENST00000614659 EHHADHQ08426 723 aa15.99■□□□□ 0.15
SNPH-203ENST00000614659 RBM46Q8TBY0 533 aaKnown RBP15.99■□□□□ 0.15
SNPH-203ENST00000614659 HAUS1Q96CS2 278 aa15.99■□□□□ 0.15
SNPH-203ENST00000614659 TROVE2P10155 538 aaKnown RBP eCLIP15.98■□□□□ 0.15
SNPH-203ENST00000614659 STX2P32856 288 aa15.98■□□□□ 0.15
SNPH-203ENST00000614659 SEPT14Q6ZU15 432 aa15.98■□□□□ 0.15
SNPH-203ENST00000614659 KCNB2Q92953 911 aa15.98■□□□□ 0.15
SNPH-203ENST00000614659 MTFR1LQ9H019 292 aa15.98■□□□□ 0.15
SNPH-203ENST00000614659 VCX3BQ9H321 246 aa15.98■□□□□ 0.15
SNPH-203ENST00000614659 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.98■□□□□ 0.15
SNPH-203ENST00000614659 ATF2P15336 505 aa15.98■□□□□ 0.15
SNPH-203ENST00000614659 PSMC4P43686 418 aa15.98■□□□□ 0.15
SNPH-203ENST00000614659 EMBQ6PCB8 327 aa15.98■□□□□ 0.15
SNPH-203ENST00000614659 STAM2O75886 525 aa15.98■□□□□ 0.15
SNPH-203ENST00000614659 CD19P15391 556 aa15.98■□□□□ 0.15
SNPH-203ENST00000614659 EIF4A3P38919 411 aaKnown RBP15.98■□□□□ 0.15
SNPH-203ENST00000614659 GOLGA8FQ08AF8 430 aa15.98■□□□□ 0.15
SNPH-203ENST00000614659 GOLGA8DPQ0D2H9 430 aa15.98■□□□□ 0.15
SNPH-203ENST00000614659 DIXDC1Q155Q3 683 aa15.98■□□□□ 0.15
SNPH-203ENST00000614659 KRT12Q99456 494 aa15.98■□□□□ 0.15
SNPH-203ENST00000614659 ABCB11O95342 1321 aa15.98■□□□□ 0.15
SNPH-203ENST00000614659 PTK2Q05397 1052 aa15.98■□□□□ 0.15
SNPH-203ENST00000614659 RABEP2Q9H5N1 569 aa15.98■□□□□ 0.15
SNPH-203ENST00000614659 CNOT10Q9H9A5 744 aaKnown RBP15.98■□□□□ 0.15
SNPH-203ENST00000614659 GPBP1L1Q9HC44 474 aaPredicted RBP15.98■□□□□ 0.15
SNPH-203ENST00000614659 ABHD10Q9NUJ1 306 aa15.98■□□□□ 0.15
SNPH-203ENST00000614659 CEP72Q9P209 647 aa15.98■□□□□ 0.15
SNPH-203ENST00000614659 SEPT9Q9UHD8 586 aaPredicted RBP15.98■□□□□ 0.15
SNPH-203ENST00000614659 AKT3Q9Y243 479 aa15.98■□□□□ 0.15
SNPH-203ENST00000614659 ATP8B3O60423 1300 aa15.98■□□□□ 0.15
SNPH-203ENST00000614659 KIF3CO14782 793 aa15.97■□□□□ 0.15
SNPH-203ENST00000614659 CUL1Q13616 776 aa15.97■□□□□ 0.15
SNPH-203ENST00000614659 KCTD1Q719H9 257 aa15.97■□□□□ 0.15
SNPH-203ENST00000614659 ENAHQ8N8S7 591 aaPredicted RBP15.97■□□□□ 0.15
SNPH-203ENST00000614659 RDH13Q8NBN7 331 aa15.97■□□□□ 0.15
SNPH-203ENST00000614659 ZHX2Q9Y6X8 837 aa15.97■□□□□ 0.15
SNPH-203ENST00000614659 A0A1W2PQC6 194 aa15.97■□□□□ 0.15
SNPH-203ENST00000614659 TBC1D8O95759 1140 aa15.97■□□□□ 0.15
SNPH-203ENST00000614659 TMEM191BP0C7N4 346 aa15.97■□□□□ 0.15
SNPH-203ENST00000614659 NSFP46459 744 aaKnown RBP15.97■□□□□ 0.15
SNPH-203ENST00000614659 TGFB2P61812 414 aa15.97■□□□□ 0.15
SNPH-203ENST00000614659 CCHCR1Q8TD31 782 aa15.97■□□□□ 0.15
SNPH-203ENST00000614659 RSAD2Q8WXG1 361 aa15.97■□□□□ 0.15
SNPH-203ENST00000614659 RIPOR2Q9Y4F9 1068 aa15.97■□□□□ 0.15
SNPH-203ENST00000614659 MROH2AA6NES4 1674 aa15.97■□□□□ 0.15
SNPH-203ENST00000614659 ADCY8P40145 1251 aa15.97■□□□□ 0.15
SNPH-203ENST00000614659 TPD52P55327 224 aaPredicted RBP15.97■□□□□ 0.15
SNPH-203ENST00000614659 MYCBPQ99417 103 aaPredicted RBP15.97■□□□□ 0.15
SNPH-203ENST00000614659 MED10Q9BTT4 135 aa15.97■□□□□ 0.15
SNPH-203ENST00000614659 INO80BQ9C086 356 aaPredicted RBP15.97■□□□□ 0.15
SNPH-203ENST00000614659 VPS37BQ9H9H4 285 aa15.97■□□□□ 0.15
SNPH-203ENST00000614659 KLHL14Q9P2G3 628 aa15.97■□□□□ 0.15
SNPH-203ENST00000614659 HEXIM1O94992 359 aaKnown RBP15.97■□□□□ 0.15
SNPH-203ENST00000614659 RCSD1Q6JBY9 416 aa15.97■□□□□ 0.15
SNPH-203ENST00000614659 RNF207Q6ZRF8 634 aa15.97■□□□□ 0.15
SNPH-203ENST00000614659 BCAS4Q8TDM0 211 aa15.97■□□□□ 0.15
SNPH-203ENST00000614659 HESX1Q9UBX0 185 aa15.97■□□□□ 0.15
SNPH-203ENST00000614659 GSG1L2A8MUP6 293 aa15.96■□□□□ 0.15
SNPH-203ENST00000614659 NKX1-1Q15270 411 aaPredicted RBP15.96■□□□□ 0.15
SNPH-203ENST00000614659 TCP11Q8WWU5 503 aa15.96■□□□□ 0.15
SNPH-203ENST00000614659 CELF1Q92879 486 aaKnown RBP15.96■□□□□ 0.15
SNPH-203ENST00000614659 PPP1R12CQ9BZL4 782 aa15.96■□□□□ 0.15
SNPH-203ENST00000614659 LRRIQ4A6NIV6 560 aa15.96■□□□□ 0.15
SNPH-203ENST00000614659 JAK3P52333 1124 aa15.96■□□□□ 0.15
SNPH-203ENST00000614659 EIF3BP55884 814 aaKnown RBP15.96■□□□□ 0.15
SNPH-203ENST00000614659 SURF1Q15526 300 aa15.96■□□□□ 0.15
SNPH-203ENST00000614659 PRR5LQ6MZQ0 368 aa15.96■□□□□ 0.15
SNPH-203ENST00000614659 GJA10Q969M2 543 aa15.96■□□□□ 0.15
SNPH-203ENST00000614659 TMEM106CQ9BVX2 250 aa15.96■□□□□ 0.15
SNPH-203ENST00000614659 PARVGQ9HBI0 331 aa15.96■□□□□ 0.15
SNPH-203ENST00000614659 GINM1Q9NU53 330 aa15.96■□□□□ 0.15
SNPH-203ENST00000614659 LCMT1Q9UIC8 334 aa15.96■□□□□ 0.15
SNPH-203ENST00000614659 SETD1BQ9UPS6 1966 aaKnown RBP15.96■□□□□ 0.15
SNPH-203ENST00000614659 SEC31AO94979 1220 aaKnown RBP15.96■□□□□ 0.15
SNPH-203ENST00000614659 CDC27P30260 824 aa15.96■□□□□ 0.15
SNPH-203ENST00000614659 CCDC38Q502W7 563 aa15.96■□□□□ 0.15
SNPH-203ENST00000614659 SLIT1O75093 1534 aa15.96■□□□□ 0.15
SNPH-203ENST00000614659 GH2P01242 217 aa15.96■□□□□ 0.15
SNPH-203ENST00000614659 ATP2C1P98194 919 aaPredicted RBP15.96■□□□□ 0.15
SNPH-203ENST00000614659 KCNB1Q14721 858 aa15.96■□□□□ 0.15
SNPH-203ENST00000614659 PPANQ9NQ55 473 aaKnown RBP15.96■□□□□ 0.15
SNPH-203ENST00000614659 DAAM1Q9Y4D1 1078 aa15.96■□□□□ 0.15
SNPH-203ENST00000614659 CCDC188H7C350 402 aa15.95■□□□□ 0.14
SNPH-203ENST00000614659 IGBP1P78318 339 aa15.95■□□□□ 0.14
SNPH-203ENST00000614659 CUL4BQ13620 913 aa15.95■□□□□ 0.14
SNPH-203ENST00000614659 STXBP2Q15833 593 aa15.95■□□□□ 0.14
SNPH-203ENST00000614659 FBXO38Q6PIJ6 1188 aa15.95■□□□□ 0.14
SNPH-203ENST00000614659 PPM1KQ8N3J5 372 aa15.95■□□□□ 0.14
SNPH-203ENST00000614659 ATP2A3Q93084 1043 aa15.95■□□□□ 0.14
SNPH-203ENST00000614659 DYNLL2Q96FJ2 89 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms