RNA–Protein interactions for RNA: ENST00000614496.4

MSH6-213, Transcript of mutS homolog 6, humanhuman

TSL 1 (best) BASIC

Gene MSH6, Length 4,150 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-213ENST00000614496 AKR1B1P15121 316 aa13.72□□□□□ -0.21
MSH6-213ENST00000614496 CORO7P57737 925 aa13.72□□□□□ -0.21
MSH6-213ENST00000614496 SPICE1Q8N0Z3 855 aa13.72□□□□□ -0.21
MSH6-213ENST00000614496 MMGT1Q8N4V1 131 aa13.72□□□□□ -0.21
MSH6-213ENST00000614496 ANKS4BQ8N8V4 417 aa13.72□□□□□ -0.21
MSH6-213ENST00000614496 RNF14Q9UBS8 474 aa13.72□□□□□ -0.21
MSH6-213ENST00000614496 SERPINB13Q9UIV8 391 aa13.72□□□□□ -0.21
MSH6-213ENST00000614496 EIF3HO15372 352 aaKnown RBP eCLIP13.71□□□□□ -0.216e-7■■□□□ 13.3
MSH6-213ENST00000614496 KSR1Q8IVT5 923 aa13.71□□□□□ -0.21
MSH6-213ENST00000614496 CACNA2D3Q8IZS8 1091 aa13.71□□□□□ -0.21
MSH6-213ENST00000614496 SPZ1Q9BXG8 430 aa13.71□□□□□ -0.21
MSH6-213ENST00000614496 BHMT2Q9H2M3 363 aa13.71□□□□□ -0.21
MSH6-213ENST00000614496 MTRF1LQ9UGC7 380 aaKnown RBP13.71□□□□□ -0.21
MSH6-213ENST00000614496 KIF4AO95239 1232 aa13.71□□□□□ -0.21
MSH6-213ENST00000614496 GBP2P32456 591 aaPredicted RBP13.71□□□□□ -0.21
MSH6-213ENST00000614496 PLTPP55058 493 aa13.71□□□□□ -0.21
MSH6-213ENST00000614496 SLFN13Q68D06 897 aa13.71□□□□□ -0.21
MSH6-213ENST00000614496 SFR1Q86XK3 245 aa13.71□□□□□ -0.21
MSH6-213ENST00000614496 KIAA0825Q8IV33 1275 aa13.71□□□□□ -0.21
MSH6-213ENST00000614496 SYCE1Q8N0S2 351 aa13.71□□□□□ -0.21
MSH6-213ENST00000614496 RNF10Q8N5U6 811 aaKnown RBP13.71□□□□□ -0.21
MSH6-213ENST00000614496 PACSIN1Q9BY11 444 aa13.71□□□□□ -0.21
MSH6-213ENST00000614496 CD209Q9NNX6 404 aa13.71□□□□□ -0.21
MSH6-213ENST00000614496 ABCC6O95255 1503 aa13.71□□□□□ -0.21
MSH6-213ENST00000614496 BUB1BO60566 1050 aaPredicted RBP13.71□□□□□ -0.22
MSH6-213ENST00000614496 NPY5RQ15761 445 aa13.71□□□□□ -0.22
MSH6-213ENST00000614496 WHAMMQ8TF30 809 aa13.71□□□□□ -0.22
MSH6-213ENST00000614496 TUBGCP6Q96RT7 1819 aa13.71□□□□□ -0.22
MSH6-213ENST00000614496 NAP1L4Q99733 375 aaKnown RBP13.71□□□□□ -0.22
MSH6-213ENST00000614496 NUDT12Q9BQG2 462 aa13.71□□□□□ -0.22
MSH6-213ENST00000614496 SAMD15Q9P1V8 674 aa13.71□□□□□ -0.22
MSH6-213ENST00000614496 C5P01031 1676 aa13.7□□□□□ -0.22
MSH6-213ENST00000614496 A0A087X0T9 212 aa13.7□□□□□ -0.22
MSH6-213ENST00000614496 PNMA6FA0A0J9YX94 578 aa13.7□□□□□ -0.22
MSH6-213ENST00000614496 FAM228BP0C875 321 aa13.7□□□□□ -0.22
MSH6-213ENST00000614496 SLCO1A2P46721 670 aa13.7□□□□□ -0.22
MSH6-213ENST00000614496 SF3B2Q13435 895 aaKnown RBP13.7□□□□□ -0.22
MSH6-213ENST00000614496 CCDC105Q8IYK2 499 aa13.7□□□□□ -0.22
MSH6-213ENST00000614496 LINC00116Q8NCU8 138 aa13.7□□□□□ -0.22
MSH6-213ENST00000614496 TBC1D22AQ8WUA7 517 aa13.7□□□□□ -0.22
MSH6-213ENST00000614496 TMOD2Q9NZR1 351 aa13.7□□□□□ -0.22
MSH6-213ENST00000614496 AMACRQ9UHK6 382 aa13.7□□□□□ -0.22
MSH6-213ENST00000614496 BAIAP2L1Q9UHR4 511 aa13.7□□□□□ -0.22
MSH6-213ENST00000614496 BCS1LQ9Y276 419 aa13.7□□□□□ -0.22
MSH6-213ENST00000614496 SLC9A1P19634 815 aa13.7□□□□□ -0.22
MSH6-213ENST00000614496 HOXA13P31271 388 aaPredicted RBP13.7□□□□□ -0.22
MSH6-213ENST00000614496 MTMR3Q13615 1198 aa13.7□□□□□ -0.22
MSH6-213ENST00000614496 SEPT7Q16181 437 aaKnown RBP13.7□□□□□ -0.22
MSH6-213ENST00000614496 MMS22LQ6ZRQ5 1243 aa13.7□□□□□ -0.22
MSH6-213ENST00000614496 FAM196AQ6ZSG2 479 aa13.7□□□□□ -0.22
MSH6-213ENST00000614496 CREG2Q8IUH2 290 aa13.7□□□□□ -0.22
MSH6-213ENST00000614496 ADGRF4Q8IZF3 695 aa13.7□□□□□ -0.22
MSH6-213ENST00000614496 PIGOQ8TEQ8 1089 aa13.7□□□□□ -0.22
MSH6-213ENST00000614496 JPH2Q9BR39 696 aaPredicted RBP13.7□□□□□ -0.22
MSH6-213ENST00000614496 PALM3A6NDB9 673 aaPredicted RBP13.7□□□□□ -0.22
MSH6-213ENST00000614496 GLI1P08151 1106 aa13.7□□□□□ -0.22
MSH6-213ENST00000614496 VPS41P49754 854 aa13.7□□□□□ -0.22
MSH6-213ENST00000614496 ZNF211Q13398 564 aaPredicted RBP13.7□□□□□ -0.22
MSH6-213ENST00000614496 TNIP1Q15025 636 aa13.7□□□□□ -0.22
MSH6-213ENST00000614496 GLE1Q53GS7 698 aaKnown RBP13.7□□□□□ -0.22
MSH6-213ENST00000614496 SEL1L2Q5TEA6 688 aa13.7□□□□□ -0.22
MSH6-213ENST00000614496 DENND2CQ68D51 928 aa13.7□□□□□ -0.22
MSH6-213ENST00000614496 CCDC174Q6PII3 467 aa13.7□□□□□ -0.22
MSH6-213ENST00000614496 TSEN2Q8NCE0 465 aaKnown RBP13.7□□□□□ -0.22
MSH6-213ENST00000614496 RAD51CO43502 376 aa13.69□□□□□ -0.22
MSH6-213ENST00000614496 FGGP02679 453 aa13.69□□□□□ -0.22
MSH6-213ENST00000614496 CALCOCO2Q13137 446 aa13.69□□□□□ -0.22
MSH6-213ENST00000614496 GRAPQ13588 217 aa13.69□□□□□ -0.22
MSH6-213ENST00000614496 GRAPLQ8TC17 118 aaPredicted RBP13.69□□□□□ -0.22
MSH6-213ENST00000614496 RGPD5Q99666 1765 aa13.69□□□□□ -0.22
MSH6-213ENST00000614496 A0A1W2PQJ5 194 aa13.69□□□□□ -0.22
MSH6-213ENST00000614496 RGS16O15492 202 aaPredicted RBP13.69□□□□□ -0.22
MSH6-213ENST00000614496 DAPK3O43293 454 aa13.69□□□□□ -0.22
MSH6-213ENST00000614496 EZRP15311 586 aaKnown RBP13.69□□□□□ -0.22
MSH6-213ENST00000614496 ATP2B4P23634 1241 aa13.69□□□□□ -0.22
MSH6-213ENST00000614496 MEA1Q16626 185 aa13.69□□□□□ -0.22
MSH6-213ENST00000614496 CENPPQ6IPU0 288 aa13.69□□□□□ -0.22
MSH6-213ENST00000614496 RNPC3Q96LT9 517 aaKnown RBP13.69□□□□□ -0.22
MSH6-213ENST00000614496 NARFQ9UHQ1 456 aa13.69□□□□□ -0.22
MSH6-213ENST00000614496 PTPN22Q9Y2R2 807 aa13.69□□□□□ -0.22
MSH6-213ENST00000614496 MAP2K2P36507 400 aa13.69□□□□□ -0.22
MSH6-213ENST00000614496 PROM2Q8N271 834 aa13.69□□□□□ -0.22
MSH6-213ENST00000614496 MRRFQ96E11 262 aaKnown RBP13.69□□□□□ -0.22
MSH6-213ENST00000614496 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.69□□□□□ -0.22
MSH6-213ENST00000614496 RABGAP1Q9Y3P9 1069 aa13.69□□□□□ -0.22
MSH6-213ENST00000614496 GDF11O95390 407 aa13.68□□□□□ -0.22
MSH6-213ENST00000614496 FAM153BP0C7A2 387 aa13.68□□□□□ -0.22
MSH6-213ENST00000614496 E2F5Q15329 346 aa13.68□□□□□ -0.22
MSH6-213ENST00000614496 SLC18A3Q16572 532 aa13.68□□□□□ -0.22
MSH6-213ENST00000614496 FAM153CQ494X1 144 aa13.68□□□□□ -0.22
MSH6-213ENST00000614496 GRIPAP1Q4V328 841 aa13.68□□□□□ -0.22
MSH6-213ENST00000614496 GKAP1Q5VSY0 366 aaPredicted RBP13.68□□□□□ -0.22
MSH6-213ENST00000614496 CCDC50Q8IVM0 306 aa13.68□□□□□ -0.22
MSH6-213ENST00000614496 FAM186BQ8IYM0 893 aa13.68□□□□□ -0.22
MSH6-213ENST00000614496 ANKRD42Q8N9B4 389 aa13.68□□□□□ -0.22
MSH6-213ENST00000614496 ANO3Q9BYT9 981 aa13.68□□□□□ -0.22
MSH6-213ENST00000614496 RAB17Q9H0T7 212 aa13.68□□□□□ -0.22
MSH6-213ENST00000614496 FAM153AQ9UHL3 310 aa13.68□□□□□ -0.22
MSH6-213ENST00000614496 BCL9O00512 1426 aa13.68□□□□□ -0.22
MSH6-213ENST00000614496 ARHGEF35A5YM69 484 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms