RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 ZBTB21Q9ULJ3 1066 aa24.18■■□□□ 1.46
POLR2J3-220ENST00000613744 STX8Q9UNK0 236 aa24.18■■□□□ 1.46
POLR2J3-220ENST00000613744 TAX1BP1Q86VP1 789 aa24.17■■□□□ 1.46
POLR2J3-220ENST00000613744 SMYD4Q8IYR2 804 aaPredicted RBP24.17■■□□□ 1.46
POLR2J3-220ENST00000613744 MREGQ8N565 214 aa24.17■■□□□ 1.46
POLR2J3-220ENST00000613744 CCDC155Q8N6L0 562 aa24.17■■□□□ 1.46
POLR2J3-220ENST00000613744 ZNF507Q8TCN5 953 aa24.17■■□□□ 1.46
POLR2J3-220ENST00000613744 MIEF2Q96C03 454 aa24.17■■□□□ 1.46
POLR2J3-220ENST00000613744 IQCDQ96DY2 449 aa24.17■■□□□ 1.46
POLR2J3-220ENST00000613744 CLMNQ96JQ2 1002 aa24.17■■□□□ 1.46
POLR2J3-220ENST00000613744 STIM2Q9P246 746 aa24.17■■□□□ 1.46
POLR2J3-220ENST00000613744 CTNND1O60716 968 aaKnown RBP24.17■■□□□ 1.46
POLR2J3-220ENST00000613744 MYCNP04198 464 aaPredicted RBP24.17■■□□□ 1.46
POLR2J3-220ENST00000613744 IREB2P48200 963 aaKnown RBP24.17■■□□□ 1.46
POLR2J3-220ENST00000613744 VAV2P52735 878 aa24.17■■□□□ 1.46
POLR2J3-220ENST00000613744 KIF5AQ12840 1032 aa24.17■■□□□ 1.46
POLR2J3-220ENST00000613744 ZNF473Q8WTR7 871 aaKnown RBP24.17■■□□□ 1.46
POLR2J3-220ENST00000613744 RRP36Q96EU6 259 aaKnown RBP24.17■■□□□ 1.46
POLR2J3-220ENST00000613744 EPSTI1Q96J88 318 aa24.17■■□□□ 1.46
POLR2J3-220ENST00000613744 GOLGA6L7A0A1B0GV03 622 aa24.16■■□□□ 1.46
POLR2J3-220ENST00000613744 PPP1R37O75864 691 aa24.16■■□□□ 1.46
POLR2J3-220ENST00000613744 GCFC2P16383 781 aaKnown RBP24.16■■□□□ 1.46
POLR2J3-220ENST00000613744 VGLL4Q14135 290 aa24.16■■□□□ 1.46
POLR2J3-220ENST00000613744 PTGISQ16647 500 aa24.16■■□□□ 1.46
POLR2J3-220ENST00000613744 SPATA4Q8NEY3 305 aa24.16■■□□□ 1.46
POLR2J3-220ENST00000613744 LRRC1Q9BTT6 524 aa24.16■■□□□ 1.46
POLR2J3-220ENST00000613744 GBA2Q9HCG7 927 aaPredicted RBP24.16■■□□□ 1.46
POLR2J3-220ENST00000613744 TACC1O75410 805 aa24.15■■□□□ 1.46
POLR2J3-220ENST00000613744 PARP1P09874 1014 aaKnown RBP24.15■■□□□ 1.46
POLR2J3-220ENST00000613744 XBP1P17861 261 aa24.15■■□□□ 1.46
POLR2J3-220ENST00000613744 DNM2P50570 870 aa24.15■■□□□ 1.46
POLR2J3-220ENST00000613744 CDR1P51861 262 aa24.15■■□□□ 1.46
POLR2J3-220ENST00000613744 NR5A1Q13285 461 aa24.15■■□□□ 1.46
POLR2J3-220ENST00000613744 TMEM179Q6ZVK1 233 aa24.15■■□□□ 1.46
POLR2J3-220ENST00000613744 ARMC9Q7Z3E5 817 aa24.15■■□□□ 1.46
POLR2J3-220ENST00000613744 RBM46Q8TBY0 533 aaKnown RBP24.15■■□□□ 1.46
POLR2J3-220ENST00000613744 NOC3LQ8WTT2 800 aaKnown RBP24.15■■□□□ 1.46
POLR2J3-220ENST00000613744 NUP133Q8WUM0 1156 aa24.15■■□□□ 1.46
POLR2J3-220ENST00000613744 MTMR7Q9Y216 660 aa24.15■■□□□ 1.46
POLR2J3-220ENST00000613744 ZNF185O15231 689 aa24.15■■□□□ 1.46
POLR2J3-220ENST00000613744 PPP2R5BQ15173 497 aa24.15■■□□□ 1.46
POLR2J3-220ENST00000613744 TMTC2Q8N394 836 aa24.15■■□□□ 1.46
POLR2J3-220ENST00000613744 TSEN2Q8NCE0 465 aaKnown RBP24.15■■□□□ 1.46
POLR2J3-220ENST00000613744 THAP9Q9H5L6 903 aa24.15■■□□□ 1.46
POLR2J3-220ENST00000613744 DMGDHQ9UI17 866 aaKnown RBP24.15■■□□□ 1.46
POLR2J3-220ENST00000613744 CCDC189A1A4V9 331 aa24.14■■□□□ 1.46
POLR2J3-220ENST00000613744 USO1O60763 962 aaKnown RBP24.14■■□□□ 1.46
POLR2J3-220ENST00000613744 FAM107AO95990 144 aa24.14■■□□□ 1.46
POLR2J3-220ENST00000613744 CALRP27797 417 aaKnown RBP24.14■■□□□ 1.46
POLR2J3-220ENST00000613744 CRYMQ14894 314 aa24.14■■□□□ 1.46
POLR2J3-220ENST00000613744 CEP85LQ5SZL2 805 aa24.14■■□□□ 1.46
POLR2J3-220ENST00000613744 C6orf89Q6UWU4 347 aa24.14■■□□□ 1.46
POLR2J3-220ENST00000613744 SCYL3Q8IZE3 742 aa24.14■■□□□ 1.46
POLR2J3-220ENST00000613744 IQCKQ8N0W5 287 aa24.14■■□□□ 1.46
POLR2J3-220ENST00000613744 CNKSR2Q8WXI2 1034 aa24.14■■□□□ 1.46
POLR2J3-220ENST00000613744 ZIM3Q96PE6 472 aa24.14■■□□□ 1.46
POLR2J3-220ENST00000613744 MTMR4Q9NYA4 1195 aa24.14■■□□□ 1.46
POLR2J3-220ENST00000613744 ODF2LQ9ULJ1 636 aa24.14■■□□□ 1.46
POLR2J3-220ENST00000613744 PASKQ96RG2 1323 aa24.14■■□□□ 1.46
POLR2J3-220ENST00000613744 ATAD5Q96QE3 1844 aa24.14■■□□□ 1.45
POLR2J3-220ENST00000613744 IGKV6D-41A0A0C4DH26 115 aa24.14■■□□□ 1.45
POLR2J3-220ENST00000613744 ASNSP08243 561 aa24.14■■□□□ 1.45
POLR2J3-220ENST00000613744 ZBED6P86452 979 aa24.14■■□□□ 1.45
POLR2J3-220ENST00000613744 ICA1Q05084 483 aa24.14■■□□□ 1.45
POLR2J3-220ENST00000613744 PPP4R3AQ6IN85 833 aa24.14■■□□□ 1.45
POLR2J3-220ENST00000613744 RCSD1Q6JBY9 416 aa24.14■■□□□ 1.45
POLR2J3-220ENST00000613744 ZNF654Q8IZM8 581 aa24.14■■□□□ 1.45
POLR2J3-220ENST00000613744 C2orf69Q8N8R5 385 aa24.14■■□□□ 1.45
POLR2J3-220ENST00000613744 LACRTQ9GZZ8 138 aa24.14■■□□□ 1.45
POLR2J3-220ENST00000613744 ELP3Q9H9T3 547 aa24.14■■□□□ 1.45
POLR2J3-220ENST00000613744 PICK1Q9NRD5 415 aa24.14■■□□□ 1.45
POLR2J3-220ENST00000613744 TAOK2Q9UL54 1235 aa24.14■■□□□ 1.45
POLR2J3-220ENST00000613744 HYOU1Q9Y4L1 999 aa24.14■■□□□ 1.45
POLR2J3-220ENST00000613744 HMGB1P1B2RPK0 211 aaPredicted RBP24.13■■□□□ 1.45
POLR2J3-220ENST00000613744 EEF2P13639 858 aaKnown RBP24.13■■□□□ 1.45
POLR2J3-220ENST00000613744 SIAH1Q8IUQ4 282 aa24.13■■□□□ 1.45
POLR2J3-220ENST00000613744 CCDC13Q8IYE1 715 aa24.13■■□□□ 1.45
POLR2J3-220ENST00000613744 TTYH3Q9C0H2 523 aa24.13■■□□□ 1.45
POLR2J3-220ENST00000613744 NHEJ1Q9H9Q4 299 aaPredicted RBP24.13■■□□□ 1.45
POLR2J3-220ENST00000613744 OTOFQ9HC10 1997 aa24.13■■□□□ 1.45
POLR2J3-220ENST00000613744 CD248Q9HCU0 757 aa24.13■■□□□ 1.45
POLR2J3-220ENST00000613744 RNF14Q9UBS8 474 aa24.13■■□□□ 1.45
POLR2J3-220ENST00000613744 CSADQ9Y600 493 aa24.13■■□□□ 1.45
POLR2J3-220ENST00000613744 SNCAIPQ9Y6H5 919 aa24.13■■□□□ 1.45
POLR2J3-220ENST00000613744 PLIN4Q96Q06 1357 aa24.12■■□□□ 1.45
POLR2J3-220ENST00000613744 RAD21O60216 631 aa24.12■■□□□ 1.45
POLR2J3-220ENST00000613744 ECE1P42892 770 aa24.12■■□□□ 1.45
POLR2J3-220ENST00000613744 IFFO1Q0D2I5 559 aa24.12■■□□□ 1.45
POLR2J3-220ENST00000613744 FIGNQ5HY92 759 aa24.12■■□□□ 1.45
POLR2J3-220ENST00000613744 CFAP58Q5T655 872 aa24.12■■□□□ 1.45
POLR2J3-220ENST00000613744 NLRP14Q86W24 1093 aa24.12■■□□□ 1.45
POLR2J3-220ENST00000613744 IFT20Q8IY31 132 aa24.12■■□□□ 1.45
POLR2J3-220ENST00000613744 LRRC47Q8N1G4 583 aaKnown RBP24.12■■□□□ 1.45
POLR2J3-220ENST00000613744 ARFGAP2Q8N6H7 521 aa24.12■■□□□ 1.45
POLR2J3-220ENST00000613744 MYCBPAPQ8TBZ2 947 aa24.12■■□□□ 1.45
POLR2J3-220ENST00000613744 RNF26Q9BY78 433 aaPredicted RBP24.12■■□□□ 1.45
POLR2J3-220ENST00000613744 RABEP2Q9H5N1 569 aa24.12■■□□□ 1.45
POLR2J3-220ENST00000613744 TCP11L1Q9NUJ3 509 aa24.12■■□□□ 1.45
POLR2J3-220ENST00000613744 PPP1R12AO14974 1030 aaPredicted RBP24.12■■□□□ 1.45
POLR2J3-220ENST00000613744 PTPRAP18433 802 aa24.12■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms