RNA–Protein interactions for RNA: ENST00000613444.4

USP39-220, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-220ENST00000613444 WRAP73Q9P2S5 460 aaPredicted RBP15.97■□□□□ 0.15
USP39-220ENST00000613444 CPA4Q9UI42 421 aa15.97■□□□□ 0.15
USP39-220ENST00000613444 STRNO43815 780 aa15.96■□□□□ 0.15
USP39-220ENST00000613444 COBLO75128 1261 aa15.96■□□□□ 0.15
USP39-220ENST00000613444 ADORA2AP29274 412 aa15.96■□□□□ 0.15
USP39-220ENST00000613444 SLC12A3P55017 1021 aa15.96■□□□□ 0.15
USP39-220ENST00000613444 SP2Q02086 613 aa15.96■□□□□ 0.15
USP39-220ENST00000613444 CTTNQ14247 550 aaKnown RBP15.96■□□□□ 0.15
USP39-220ENST00000613444 ZNF792Q3KQV3 632 aa15.96■□□□□ 0.15
USP39-220ENST00000613444 GNPTABQ3T906 1256 aa15.96■□□□□ 0.15
USP39-220ENST00000613444 GPR142Q7Z601 462 aa15.96■□□□□ 0.15
USP39-220ENST00000613444 BPIFA3Q9BQP9 254 aa15.96■□□□□ 0.15
USP39-220ENST00000613444 NFASCO94856 1347 aa15.96■□□□□ 0.15
USP39-220ENST00000613444 LOC102724159A0A0B4J2E5 919 aa15.96■□□□□ 0.14
USP39-220ENST00000613444 MUTP22033 750 aa15.96■□□□□ 0.14
USP39-220ENST00000613444 DHX8Q14562 1220 aaKnown RBP15.96■□□□□ 0.14
USP39-220ENST00000613444 PWP2Q15269 919 aaKnown RBP15.96■□□□□ 0.14
USP39-220ENST00000613444 UVSSAQ2YD98 709 aa15.96■□□□□ 0.14
USP39-220ENST00000613444 CYP4F22Q6NT55 531 aa15.96■□□□□ 0.14
USP39-220ENST00000613444 C17orf99Q6UX52 265 aa15.96■□□□□ 0.14
USP39-220ENST00000613444 DHX40Q8IX18 779 aaKnown RBP15.96■□□□□ 0.14
USP39-220ENST00000613444 KCTD17Q8N5Z5 321 aa15.96■□□□□ 0.14
USP39-220ENST00000613444 ZNF784Q8NCA9 323 aaPredicted RBP15.96■□□□□ 0.14
USP39-220ENST00000613444 SENP7Q9BQF6 1050 aa15.96■□□□□ 0.14
USP39-220ENST00000613444 TLR2O60603 784 aa15.95■□□□□ 0.14
USP39-220ENST00000613444 PLA2G4BP0C869 781 aa15.95■□□□□ 0.14
USP39-220ENST00000613444 AMPD3Q01432 767 aa15.95■□□□□ 0.14
USP39-220ENST00000613444 PDE4DQ08499 809 aa15.95■□□□□ 0.14
USP39-220ENST00000613444 SREBF2Q12772 1141 aa15.95■□□□□ 0.14
USP39-220ENST00000613444 GRB14Q14449 540 aa15.95■□□□□ 0.14
USP39-220ENST00000613444 KCNB1Q14721 858 aa15.95■□□□□ 0.14
USP39-220ENST00000613444 MIER3Q7Z3K6 550 aa15.95■□□□□ 0.14
USP39-220ENST00000613444 MYH9P35579 1960 aaKnown RBP15.95■□□□□ 0.14
USP39-220ENST00000613444 MAPK4P31152 587 aa15.94■□□□□ 0.14
USP39-220ENST00000613444 KRT76Q01546 638 aa15.94■□□□□ 0.14
USP39-220ENST00000613444 KMT5BQ4FZB7 885 aa15.94■□□□□ 0.14
USP39-220ENST00000613444 ZNF746Q6NUN9 644 aaPredicted RBP15.94■□□□□ 0.14
USP39-220ENST00000613444 MLKLQ8NB16 471 aa15.94■□□□□ 0.14
USP39-220ENST00000613444 NEK9Q8TD19 979 aa15.94■□□□□ 0.14
USP39-220ENST00000613444 DNAJC19Q96DA6 116 aa15.94■□□□□ 0.14
USP39-220ENST00000613444 TELO2Q9Y4R8 837 aa15.94■□□□□ 0.14
USP39-220ENST00000613444 MGAMO43451 1857 aa15.94■□□□□ 0.14
USP39-220ENST00000613444 PCNTO95613 3336 aa15.94■□□□□ 0.14
USP39-220ENST00000613444 RHOBTB3O94955 611 aa15.94■□□□□ 0.14
USP39-220ENST00000613444 CD44P16070 742 aaKnown RBP15.94■□□□□ 0.14
USP39-220ENST00000613444 ARSHQ5FYA8 562 aa15.94■□□□□ 0.14
USP39-220ENST00000613444 SEPT14Q6ZU15 432 aa15.94■□□□□ 0.14
USP39-220ENST00000613444 TPH2Q8IWU9 490 aa15.94■□□□□ 0.14
USP39-220ENST00000613444 SYT2Q8N9I0 419 aaPredicted RBP15.94■□□□□ 0.14
USP39-220ENST00000613444 LXNQ9BS40 222 aa15.94■□□□□ 0.14
USP39-220ENST00000613444 NAT10Q9H0A0 1025 aaKnown RBP15.94■□□□□ 0.14
USP39-220ENST00000613444 DNM3Q9UQ16 869 aa15.94■□□□□ 0.14
USP39-220ENST00000613444 B4DLN1 442 aa15.93■□□□□ 0.14
USP39-220ENST00000613444 ZBTB39O15060 712 aa15.93■□□□□ 0.14
USP39-220ENST00000613444 CYP11B2P19099 503 aa15.93■□□□□ 0.14
USP39-220ENST00000613444 NCAPHQ15003 741 aa15.93■□□□□ 0.14
USP39-220ENST00000613444 PLEKHH3Q7Z736 793 aa15.93■□□□□ 0.14
USP39-220ENST00000613444 BANK1Q8NDB2 785 aa15.93■□□□□ 0.14
USP39-220ENST00000613444 DDX12PQ92771 950 aa15.93■□□□□ 0.14
USP39-220ENST00000613444 MED15Q96RN5 788 aa15.93■□□□□ 0.14
USP39-220ENST00000613444 RMND1Q9NWS8 449 aa15.93■□□□□ 0.14
USP39-220ENST00000613444 RASSF10A6NK89 507 aa15.93■□□□□ 0.14
USP39-220ENST00000613444 WDR64B1ANS9 1081 aa15.93■□□□□ 0.14
USP39-220ENST00000613444 PPP1R3GB7ZBB8 358 aa15.93■□□□□ 0.14
USP39-220ENST00000613444 EYA4O95677 639 aa15.93■□□□□ 0.14
USP39-220ENST00000613444 P4HBP07237 508 aaKnown RBP15.93■□□□□ 0.14
USP39-220ENST00000613444 SFNP31947 248 aa15.93■□□□□ 0.14
USP39-220ENST00000613444 JAK3P52333 1124 aa15.93■□□□□ 0.14
USP39-220ENST00000613444 ASIC1P78348 528 aa15.93■□□□□ 0.14
USP39-220ENST00000613444 EHHADHQ08426 723 aa15.93■□□□□ 0.14
USP39-220ENST00000613444 CRHR2Q13324 411 aa15.93■□□□□ 0.14
USP39-220ENST00000613444 ZNF658Q5TYW1 1059 aaPredicted RBP15.93■□□□□ 0.14
USP39-220ENST00000613444 EEPD1Q7L9B9 569 aa15.93■□□□□ 0.14
USP39-220ENST00000613444 SMYD4Q8IYR2 804 aaPredicted RBP15.93■□□□□ 0.14
USP39-220ENST00000613444 RDM1Q8NG50 284 aa15.93■□□□□ 0.14
USP39-220ENST00000613444 JPH1Q9HDC5 661 aaPredicted RBP15.93■□□□□ 0.14
USP39-220ENST00000613444 IVNS1ABPQ9Y6Y0 642 aa15.93■□□□□ 0.14
USP39-220ENST00000613444 AP5Z1O43299 807 aa15.92■□□□□ 0.14
USP39-220ENST00000613444 TGFB3P10600 412 aa15.92■□□□□ 0.14
USP39-220ENST00000613444 UBA1P22314 1058 aaKnown RBP15.92■□□□□ 0.14
USP39-220ENST00000613444 UGCGQ16739 394 aa15.92■□□□□ 0.14
USP39-220ENST00000613444 DYMQ7RTS9 669 aa15.92■□□□□ 0.14
USP39-220ENST00000613444 ZNF467Q7Z7K2 595 aaPredicted RBP15.92■□□□□ 0.14
USP39-220ENST00000613444 AOPEPQ8N6M6 819 aa15.92■□□□□ 0.14
USP39-220ENST00000613444 PIGOQ8TEQ8 1089 aa15.92■□□□□ 0.14
USP39-220ENST00000613444 MPHOSPH6Q99547 160 aaKnown RBP15.92■□□□□ 0.14
USP39-220ENST00000613444 LRRC27Q9C0I9 530 aa15.92■□□□□ 0.14
USP39-220ENST00000613444 PVALEFA0A1B0GWK0 134 aa15.92■□□□□ 0.14
USP39-220ENST00000613444 ASB14A6NK59 587 aa15.92■□□□□ 0.14
USP39-220ENST00000613444 LYPLA2O95372 231 aa15.92■□□□□ 0.14
USP39-220ENST00000613444 ARIH2O95376 493 aa15.92■□□□□ 0.14
USP39-220ENST00000613444 YY1P25490 414 aa15.92■□□□□ 0.14
USP39-220ENST00000613444 UNC13DQ70J99 1090 aa15.92■□□□□ 0.14
USP39-220ENST00000613444 ARMCX2Q7L311 632 aa15.92■□□□□ 0.14
USP39-220ENST00000613444 GPBP1Q86WP2 473 aa15.92■□□□□ 0.14
USP39-220ENST00000613444 SMAP1Q8IYB5 467 aaPredicted RBP15.92■□□□□ 0.14
USP39-220ENST00000613444 GIMAP8Q8ND71 665 aaPredicted RBP15.92■□□□□ 0.14
USP39-220ENST00000613444 NACC1Q96RE7 527 aa15.92■□□□□ 0.14
USP39-220ENST00000613444 BHMT2Q9H2M3 363 aa15.92■□□□□ 0.14
USP39-220ENST00000613444 ZFYVE28Q9HCC9 887 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms