RNA–Protein interactions for RNA: ENST00000612123.3

PBX1-221, Transcript of PBX homeobox 1, humanhuman

TSL 5 BASIC

Gene PBX1, Length 6,062 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-221ENST00000612123 LONRF2Q1L5Z9 754 aa7.3□□□□□ -1.24
PBX1-221ENST00000612123 SPRED3Q2MJR0 410 aa7.3□□□□□ -1.24
PBX1-221ENST00000612123 STYK1Q6J9G0 422 aa7.3□□□□□ -1.24
PBX1-221ENST00000612123 TRIM11Q96F44 468 aa7.3□□□□□ -1.24
PBX1-221ENST00000612123 ANKRD27Q96NW4 1050 aa7.3□□□□□ -1.24
PBX1-221ENST00000612123 FAM193BQ96PV7 902 aaPredicted RBP7.3□□□□□ -1.24
PBX1-221ENST00000612123 ACCSQ96QU6 501 aa7.3□□□□□ -1.24
PBX1-221ENST00000612123 PIGSQ96S52 555 aa7.3□□□□□ -1.24
PBX1-221ENST00000612123 ABCB6Q9NP58 842 aa7.3□□□□□ -1.24
PBX1-221ENST00000612123 DCP1AQ9NPI6 582 aaPredicted RBP7.3□□□□□ -1.24
PBX1-221ENST00000612123 TBC1D22BQ9NU19 505 aa7.3□□□□□ -1.24
PBX1-221ENST00000612123 SRPRBQ9Y5M8 271 aaKnown RBP7.3□□□□□ -1.24
PBX1-221ENST00000612123 CEMIPQ8WUJ3 1361 aa7.3□□□□□ -1.24
PBX1-221ENST00000612123 LRRC10BA6NIK2 292 aa7.3□□□□□ -1.24
PBX1-221ENST00000612123 KRT19P08727 400 aa7.3□□□□□ -1.24
PBX1-221ENST00000612123 HDLBPQ00341 1268 aaKnown RBP7.3□□□□□ -1.24
PBX1-221ENST00000612123 PTPROQ16827 1216 aa7.3□□□□□ -1.24
PBX1-221ENST00000612123 TRIM58Q8NG06 486 aa7.3□□□□□ -1.24
PBX1-221ENST00000612123 SYMPKQ92797 1274 aaKnown RBP7.3□□□□□ -1.24
PBX1-221ENST00000612123 MXD3Q9BW11 206 aa7.3□□□□□ -1.24
PBX1-221ENST00000612123 INO80BQ9C086 356 aaPredicted RBP7.3□□□□□ -1.24
PBX1-221ENST00000612123 HAUS4Q9H6D7 363 aa7.3□□□□□ -1.24
PBX1-221ENST00000612123 RHBDL2Q9NX52 303 aa7.3□□□□□ -1.24
PBX1-221ENST00000612123 KIAA1024Q9UPX6 916 aa7.3□□□□□ -1.24
PBX1-221ENST00000612123 COL14A1Q05707 1796 aaKnown RBP7.3□□□□□ -1.24
PBX1-221ENST00000612123 ATRNO75882 1429 aa7.3□□□□□ -1.24
PBX1-221ENST00000612123 USP42Q9H9J4 1324 aaKnown RBP7.3□□□□□ -1.24
PBX1-221ENST00000612123 ZBTB5O15062 677 aa7.3□□□□□ -1.24
PBX1-221ENST00000612123 ATP1A3P13637 1013 aa7.3□□□□□ -1.24
PBX1-221ENST00000612123 RPS6KA1Q15418 735 aa7.3□□□□□ -1.24
PBX1-221ENST00000612123 LGSNQ5TDP6 509 aa7.3□□□□□ -1.24
PBX1-221ENST00000612123 PI16Q6UXB8 463 aa7.3□□□□□ -1.24
PBX1-221ENST00000612123 LINC00301Q8NCQ3 95 aa7.3□□□□□ -1.24
PBX1-221ENST00000612123 PHACTR1Q9C0D0 580 aa7.3□□□□□ -1.24
PBX1-221ENST00000612123 LRRIQ4A6NIV6 560 aa7.3□□□□□ -1.24
PBX1-221ENST00000612123 USP17L10C9JJH3 530 aa7.3□□□□□ -1.24
PBX1-221ENST00000612123 CAMTA2O94983 1202 aa7.3□□□□□ -1.24
PBX1-221ENST00000612123 GDF11O95390 407 aa7.3□□□□□ -1.24
PBX1-221ENST00000612123 RPS12P25398 132 aaKnown RBP7.3□□□□□ -1.24
PBX1-221ENST00000612123 ADKP55263 362 aaKnown RBP7.3□□□□□ -1.24
PBX1-221ENST00000612123 FOXO4P98177 505 aa7.3□□□□□ -1.24
PBX1-221ENST00000612123 HADHQ16836 314 aaKnown RBP7.3□□□□□ -1.24
PBX1-221ENST00000612123 CFAP221Q4G0U5 840 aa7.3□□□□□ -1.24
PBX1-221ENST00000612123 USP17L2Q6R6M4 530 aa7.3□□□□□ -1.24
PBX1-221ENST00000612123 GTF3C2Q8WUA4 911 aaPredicted RBP7.3□□□□□ -1.24
PBX1-221ENST00000612123 FAM84BQ96KN1 310 aaPredicted RBP7.3□□□□□ -1.24
PBX1-221ENST00000612123 NACA2Q9H009 215 aa7.3□□□□□ -1.24
PBX1-221ENST00000612123 ZNF277Q9NRM2 450 aaPredicted RBP7.3□□□□□ -1.24
PBX1-221ENST00000612123 PARP2Q9UGN5 583 aa7.3□□□□□ -1.24
PBX1-221ENST00000612123 CSPG5O95196 566 aa7.3□□□□□ -1.24
PBX1-221ENST00000612123 GH2P01242 217 aa7.3□□□□□ -1.24
PBX1-221ENST00000612123 PRDX5P30044 214 aa7.3□□□□□ -1.24
PBX1-221ENST00000612123 NBPF20Q3BBV1 942 aa7.3□□□□□ -1.24
PBX1-221ENST00000612123 FASTKD5Q7L8L6 764 aaKnown RBP7.3□□□□□ -1.24
PBX1-221ENST00000612123 SGMS1Q86VZ5 419 aa7.3□□□□□ -1.24
PBX1-221ENST00000612123 IFT20Q8IY31 132 aa7.3□□□□□ -1.24
PBX1-221ENST00000612123 SPICE1Q8N0Z3 855 aa7.3□□□□□ -1.24
PBX1-221ENST00000612123 MCPH1Q8NEM0 835 aa7.3□□□□□ -1.24
PBX1-221ENST00000612123 ZNF483Q8TF39 744 aaPredicted RBP7.3□□□□□ -1.24
PBX1-221ENST00000612123 HAUS1Q96CS2 278 aa7.3□□□□□ -1.24
PBX1-221ENST00000612123 RPS6KC1Q96S38 1066 aa7.3□□□□□ -1.24
PBX1-221ENST00000612123 USP54Q70EL1 1684 aa7.29□□□□□ -1.24
PBX1-221ENST00000612123 UNCXA6NJT0 531 aa7.29□□□□□ -1.24
PBX1-221ENST00000612123 ZBTB24O43167 697 aaPredicted RBP7.29□□□□□ -1.24
PBX1-221ENST00000612123 KCNQ2O43526 872 aa7.29□□□□□ -1.24
PBX1-221ENST00000612123 SLFN12LQ6IEE8 588 aa7.29□□□□□ -1.24
PBX1-221ENST00000612123 HHIPL2Q6UWX4 724 aa7.29□□□□□ -1.24
PBX1-221ENST00000612123 TAOK1Q7L7X3 1001 aa7.29□□□□□ -1.24
PBX1-221ENST00000612123 ZNF579Q8NAF0 562 aaKnown RBP7.29□□□□□ -1.24
PBX1-221ENST00000612123 TCP11Q8WWU5 503 aa7.29□□□□□ -1.24
PBX1-221ENST00000612123 SLF1Q9BQI6 1058 aa7.29□□□□□ -1.24
PBX1-221ENST00000612123 LMCD1Q9NZU5 365 aa7.29□□□□□ -1.24
PBX1-221ENST00000612123 PXDNQ92626 1479 aa7.29□□□□□ -1.24
PBX1-221ENST00000612123 E7EVH7 732 aa7.29□□□□□ -1.24
PBX1-221ENST00000612123 ENC1O14682 589 aa7.29□□□□□ -1.24
PBX1-221ENST00000612123 HNRNPDLO14979 420 aaKnown RBP7.29□□□□□ -1.24
PBX1-221ENST00000612123 GNAT1P11488 350 aa7.29□□□□□ -1.24
PBX1-221ENST00000612123 H2AFXP16104 143 aaPredicted RBP7.29□□□□□ -1.24
PBX1-221ENST00000612123 PSMC2P35998 433 aaKnown RBP7.29□□□□□ -1.24
PBX1-221ENST00000612123 KRT76Q01546 638 aa7.29□□□□□ -1.24
PBX1-221ENST00000612123 PNOCQ13519 176 aa7.29□□□□□ -1.24
PBX1-221ENST00000612123 SBK1Q52WX2 424 aa7.29□□□□□ -1.24
PBX1-221ENST00000612123 C1QTNF12Q5T7M4 302 aa7.29□□□□□ -1.24
PBX1-221ENST00000612123 C8orf74Q6P047 294 aa7.29□□□□□ -1.24
PBX1-221ENST00000612123 KCTD1Q719H9 257 aa7.29□□□□□ -1.24
PBX1-221ENST00000612123 ZKSCAN4Q969J2 545 aaPredicted RBP7.29□□□□□ -1.24
PBX1-221ENST00000612123 EEF2KMTQ96G04 330 aa7.29□□□□□ -1.24
PBX1-221ENST00000612123 ANO3Q9BYT9 981 aa7.29□□□□□ -1.24
PBX1-221ENST00000612123 IFIH1Q9BYX4 1025 aaKnown RBP7.29□□□□□ -1.24
PBX1-221ENST00000612123 H2AFZP0C0S5 128 aa7.29□□□□□ -1.24
PBX1-221ENST00000612123 FAM163BP0C2L3 166 aa7.29□□□□□ -1.24
PBX1-221ENST00000612123 HOXD10P28358 340 aa7.29□□□□□ -1.24
PBX1-221ENST00000612123 SEC24CP53992 1094 aa7.29□□□□□ -1.24
PBX1-221ENST00000612123 PTK2Q05397 1052 aa7.29□□□□□ -1.24
PBX1-221ENST00000612123 H2AFVQ71UI9 128 aa7.29□□□□□ -1.24
PBX1-221ENST00000612123 RRAGAQ7L523 313 aa7.29□□□□□ -1.24
PBX1-221ENST00000612123 PEX26Q7Z412 305 aa7.29□□□□□ -1.24
PBX1-221ENST00000612123 CMTR1Q8N1G2 835 aaKnown RBP7.29□□□□□ -1.24
PBX1-221ENST00000612123 NT5C1BQ96P26 610 aa7.29□□□□□ -1.24
PBX1-221ENST00000612123 BLZF1Q9H2G9 400 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms