RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 SOX1O00570 391 aaPredicted RBP14.01□□□□□ -0.17
CBWD3-208ENST00000612050 PPFIA3O75145 1194 aa14.01□□□□□ -0.17
CBWD3-208ENST00000612050 CYP3A4P08684 503 aa14.01□□□□□ -0.17
CBWD3-208ENST00000612050 IQCF3P0C7M6 154 aa14.01□□□□□ -0.17
CBWD3-208ENST00000612050 SMIM10L2AP0DMW4 78 aa14.01□□□□□ -0.17
CBWD3-208ENST00000612050 SMIM10L2BP0DMW5 78 aa14.01□□□□□ -0.17
CBWD3-208ENST00000612050 SELPP16109 830 aa14.01□□□□□ -0.17
CBWD3-208ENST00000612050 SCRN1Q12765 414 aa14.01□□□□□ -0.17
CBWD3-208ENST00000612050 FAM160B1Q5W0V3 765 aa14.01□□□□□ -0.17
CBWD3-208ENST00000612050 LRRC8DQ7L1W4 858 aa14.01□□□□□ -0.17
CBWD3-208ENST00000612050 DEFB128Q7Z7B8 93 aa14.01□□□□□ -0.17
CBWD3-208ENST00000612050 RSPH3Q86UC2 560 aa14.01□□□□□ -0.17
CBWD3-208ENST00000612050 BLIDQ8IZY5 108 aa14.01□□□□□ -0.17
CBWD3-208ENST00000612050 PPP1R13LQ8WUF5 828 aa14.01□□□□□ -0.17
CBWD3-208ENST00000612050 HERVK_113Q902F9 699 aa14.01□□□□□ -0.17
CBWD3-208ENST00000612050 ZNF577Q9BSK1 485 aa14.01□□□□□ -0.17
CBWD3-208ENST00000612050 WNT8AQ9H1J5 351 aa14.01□□□□□ -0.17
CBWD3-208ENST00000612050 TBC1D22BQ9NU19 505 aa14.01□□□□□ -0.17
CBWD3-208ENST00000612050 SLC4A7Q9Y6M7 1214 aa14.01□□□□□ -0.17
CBWD3-208ENST00000612050 UMODL1Q5DID0 1318 aa14.01□□□□□ -0.17
CBWD3-208ENST00000612050 EMSYQ7Z589 1322 aa14.01□□□□□ -0.17
CBWD3-208ENST00000612050 NRCAMQ92823 1304 aa14.01□□□□□ -0.17
CBWD3-208ENST00000612050 TMEM265A0A087WTH1 108 aa14□□□□□ -0.17
CBWD3-208ENST00000612050 CCDC194A0A1B0GVG4 234 aa14□□□□□ -0.17
CBWD3-208ENST00000612050 MEIS1O00470 390 aa14□□□□□ -0.17
CBWD3-208ENST00000612050 ATP9AO75110 1047 aa14□□□□□ -0.17
CBWD3-208ENST00000612050 CAND2O75155 1236 aa14□□□□□ -0.17
CBWD3-208ENST00000612050 SLC26A2P50443 739 aa14□□□□□ -0.17
CBWD3-208ENST00000612050 USP11P51784 963 aa14□□□□□ -0.17
CBWD3-208ENST00000612050 EPHB4P54760 987 aa14□□□□□ -0.17
CBWD3-208ENST00000612050 RAB30Q15771 203 aa14□□□□□ -0.17
CBWD3-208ENST00000612050 FAM109BQ6ICB4 259 aaPredicted RBP14□□□□□ -0.17
CBWD3-208ENST00000612050 OTOP2Q7RTS6 562 aa14□□□□□ -0.17
CBWD3-208ENST00000612050 IL27Q8NEV9 243 aa14□□□□□ -0.17
CBWD3-208ENST00000612050 AGO4Q9HCK5 861 aaKnown RBP14□□□□□ -0.17
CBWD3-208ENST00000612050 MSRAQ9UJ68 235 aa14□□□□□ -0.17
CBWD3-208ENST00000612050 TPCN1Q9ULQ1 816 aa14□□□□□ -0.17
CBWD3-208ENST00000612050 IPO5O00410 1097 aaKnown RBP13.99□□□□□ -0.17
CBWD3-208ENST00000612050 BACH1O14867 736 aa13.99□□□□□ -0.17
CBWD3-208ENST00000612050 EFCAB14O75071 495 aa13.99□□□□□ -0.17
CBWD3-208ENST00000612050 THPOP40225 353 aa13.99□□□□□ -0.17
CBWD3-208ENST00000612050 KCNJ6P48051 423 aa13.99□□□□□ -0.17
CBWD3-208ENST00000612050 PPFIA1Q13136 1202 aa13.99□□□□□ -0.17
CBWD3-208ENST00000612050 PRR16Q569H4 304 aa13.99□□□□□ -0.17
CBWD3-208ENST00000612050 MIS18BP1Q6P0N0 1132 aa13.99□□□□□ -0.17
CBWD3-208ENST00000612050 KRT25Q7Z3Z0 450 aa13.99□□□□□ -0.17
CBWD3-208ENST00000612050 IL17RAQ96F46 866 aa13.99□□□□□ -0.17
CBWD3-208ENST00000612050 NAP1L4Q99733 375 aaKnown RBP13.99□□□□□ -0.17
CBWD3-208ENST00000612050 ORC3Q9UBD5 711 aaPredicted RBP13.99□□□□□ -0.17
CBWD3-208ENST00000612050 TRPC6Q9Y210 931 aa13.99□□□□□ -0.17
CBWD3-208ENST00000612050 SAMM50Q9Y512 469 aa13.99□□□□□ -0.17
CBWD3-208ENST00000612050 RRN3P2A6NIE6 340 aa13.98□□□□□ -0.17
CBWD3-208ENST00000612050 DDX39AO00148 427 aaKnown RBP13.98□□□□□ -0.17
CBWD3-208ENST00000612050 BAIAP3O94812 1187 aa13.98□□□□□ -0.17
CBWD3-208ENST00000612050 ARP10275 920 aa13.98□□□□□ -0.17
CBWD3-208ENST00000612050 CKBP12277 381 aa13.98□□□□□ -0.17
CBWD3-208ENST00000612050 MARK3P27448 753 aa13.98□□□□□ -0.17
CBWD3-208ENST00000612050 STAT5BP51692 787 aa13.98□□□□□ -0.17
CBWD3-208ENST00000612050 ACTR2P61160 394 aa13.98□□□□□ -0.17
CBWD3-208ENST00000612050 KRT76Q01546 638 aa13.98□□□□□ -0.17
CBWD3-208ENST00000612050 RBL2Q08999 1139 aa13.98□□□□□ -0.17
CBWD3-208ENST00000612050 MKRN4PQ13434 485 aaPredicted RBP13.98□□□□□ -0.17
CBWD3-208ENST00000612050 NONOQ15233 471 aaKnown RBP eCLIP13.98□□□□□ -0.17
CBWD3-208ENST00000612050 TAF2Q6P1X5 1199 aa13.98□□□□□ -0.17
CBWD3-208ENST00000612050 TRIM50Q86XT4 487 aa13.98□□□□□ -0.17
CBWD3-208ENST00000612050 SMAP1Q8IYB5 467 aaPredicted RBP13.98□□□□□ -0.17
CBWD3-208ENST00000612050 DAGLBQ8NCG7 672 aa13.98□□□□□ -0.17
CBWD3-208ENST00000612050 RASGRP4Q8TDF6 673 aa13.98□□□□□ -0.17
CBWD3-208ENST00000612050 RNPEPQ9H4A4 650 aa13.98□□□□□ -0.17
CBWD3-208ENST00000612050 BCAS3Q9H6U6 928 aa13.98□□□□□ -0.17
CBWD3-208ENST00000612050 TRIP12Q14669 1992 aaPredicted RBP13.98□□□□□ -0.17
CBWD3-208ENST00000612050 GSTTP1A0A1W2PQM5 241 aa13.98□□□□□ -0.17
CBWD3-208ENST00000612050 RSPH10B2B2RC85 870 aa13.98□□□□□ -0.17
CBWD3-208ENST00000612050 KIF28PB7ZC32 967 aa13.98□□□□□ -0.17
CBWD3-208ENST00000612050 FAM86B1E9PN63 330 aa13.98□□□□□ -0.17
CBWD3-208ENST00000612050 M0QZ92 97 aa13.98□□□□□ -0.17
CBWD3-208ENST00000612050 MARCH6O60337 910 aa13.98□□□□□ -0.17
CBWD3-208ENST00000612050 FAM86B2P0C5J1 330 aa13.98□□□□□ -0.17
CBWD3-208ENST00000612050 RSPH10BP0C881 870 aa13.98□□□□□ -0.17
CBWD3-208ENST00000612050 PLPPR4Q7Z2D5 763 aa13.98□□□□□ -0.17
CBWD3-208ENST00000612050 SERINC5Q86VE9 423 aa13.98□□□□□ -0.17
CBWD3-208ENST00000612050 CKAP2LQ8IYA6 745 aa13.98□□□□□ -0.17
CBWD3-208ENST00000612050 CYP2W1Q8TAV3 490 aa13.98□□□□□ -0.17
CBWD3-208ENST00000612050 TBCKQ8TEA7 893 aa13.98□□□□□ -0.17
CBWD3-208ENST00000612050 GTF3C6Q969F1 213 aa13.98□□□□□ -0.17
CBWD3-208ENST00000612050 ZSCAN31Q96LW9 406 aaPredicted RBP13.98□□□□□ -0.17
CBWD3-208ENST00000612050 SLC9A7Q96T83 725 aa13.98□□□□□ -0.17
CBWD3-208ENST00000612050 SETD4Q9NVD3 440 aa13.98□□□□□ -0.17
CBWD3-208ENST00000612050 LIMCH1Q9UPQ0 1083 aa13.98□□□□□ -0.17
CBWD3-208ENST00000612050 ST18O60284 1047 aa13.97□□□□□ -0.17
CBWD3-208ENST00000612050 GAS7O60861 476 aa13.97□□□□□ -0.17
CBWD3-208ENST00000612050 PSAPP07602 524 aa13.97□□□□□ -0.17
CBWD3-208ENST00000612050 CIITAP33076 1130 aa13.97□□□□□ -0.17
CBWD3-208ENST00000612050 GRIK4Q16099 956 aa13.97□□□□□ -0.17
CBWD3-208ENST00000612050 ZNF746Q6NUN9 644 aaPredicted RBP13.97□□□□□ -0.17
CBWD3-208ENST00000612050 CNKSR3Q6P9H4 555 aa13.97□□□□□ -0.17
CBWD3-208ENST00000612050 C16orf59Q7L2K0 433 aa13.97□□□□□ -0.17
CBWD3-208ENST00000612050 TIFAQ96CG3 184 aa13.97□□□□□ -0.17
CBWD3-208ENST00000612050 TEKT3Q9BXF9 490 aa13.97□□□□□ -0.17
CBWD3-208ENST00000612050 ZNF302Q9NR11 478 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms