RNA–Protein interactions for RNA: ENST00000611614.4

COPS7B-223, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3 BASIC

Gene COPS7B, Length 2,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-223ENST00000611614 FUT8Q9BYC5 575 aa15.4■□□□□ 0.06
COPS7B-223ENST00000611614 RAB34Q9BZG1 259 aa15.4■□□□□ 0.06
COPS7B-223ENST00000611614 STK17AQ9UEE5 414 aa15.4■□□□□ 0.06
COPS7B-223ENST00000611614 SNCAIPQ9Y6H5 919 aa15.4■□□□□ 0.06
COPS7B-223ENST00000611614 A0A0U1RQJ8 604 aa15.4■□□□□ 0.06
COPS7B-223ENST00000611614 PIK3CDO00329 1044 aa15.4■□□□□ 0.06
COPS7B-223ENST00000611614 EDIL3O43854 480 aa15.4■□□□□ 0.06
COPS7B-223ENST00000611614 DNM2P50570 870 aa15.4■□□□□ 0.06
COPS7B-223ENST00000611614 IRX5P78411 483 aaPredicted RBP15.4■□□□□ 0.06
COPS7B-223ENST00000611614 PDIA5Q14554 519 aa15.4■□□□□ 0.06
COPS7B-223ENST00000611614 FAM114A1Q8IWE2 563 aa15.4■□□□□ 0.06
COPS7B-223ENST00000611614 ACRBPQ8NEB7 543 aa15.4■□□□□ 0.06
COPS7B-223ENST00000611614 ATRIPQ8WXE1 791 aa15.4■□□□□ 0.06
COPS7B-223ENST00000611614 DDX25Q9UHL0 483 aaKnown RBP15.4■□□□□ 0.06
COPS7B-223ENST00000611614 SLC37A4O43826 429 aa15.39■□□□□ 0.05
COPS7B-223ENST00000611614 TDP2O95551 362 aa15.39■□□□□ 0.05
COPS7B-223ENST00000611614 TUBBP07437 444 aa15.39■□□□□ 0.05
COPS7B-223ENST00000611614 HOXA13P31271 388 aaPredicted RBP15.39■□□□□ 0.05
COPS7B-223ENST00000611614 TMEM132AQ24JP5 1023 aa15.39■□□□□ 0.05
COPS7B-223ENST00000611614 ANKRD40Q6AI12 368 aa15.39■□□□□ 0.05
COPS7B-223ENST00000611614 OR8K1Q8NGG5 319 aa15.39■□□□□ 0.05
COPS7B-223ENST00000611614 PNMA5Q96PV4 448 aa15.39■□□□□ 0.05
COPS7B-223ENST00000611614 SLC38A10Q9HBR0 1119 aa15.39■□□□□ 0.05
COPS7B-223ENST00000611614 CAPN11Q9UMQ6 739 aa15.39■□□□□ 0.05
COPS7B-223ENST00000611614 LUC7L2Q9Y383 392 aaKnown RBP15.39■□□□□ 0.05
COPS7B-223ENST00000611614 SCN4AP35499 1836 aa15.39■□□□□ 0.05
COPS7B-223ENST00000611614 TTC26A0AVF1 554 aa15.39■□□□□ 0.05
COPS7B-223ENST00000611614 PES1O00541 588 aaKnown RBP15.39■□□□□ 0.05
COPS7B-223ENST00000611614 MAP2K7O14733 419 aa15.39■□□□□ 0.05
COPS7B-223ENST00000611614 FCER1AP12319 257 aa15.39■□□□□ 0.05
COPS7B-223ENST00000611614 CHMP4BP1P59074 171 aa15.39■□□□□ 0.05
COPS7B-223ENST00000611614 COG2Q14746 738 aa15.39■□□□□ 0.05
COPS7B-223ENST00000611614 MCF2L2Q86YR7 1114 aa15.39■□□□□ 0.05
COPS7B-223ENST00000611614 DNAJC7Q99615 494 aa15.39■□□□□ 0.05
COPS7B-223ENST00000611614 TUBGCP2Q9BSJ2 902 aa15.39■□□□□ 0.05
COPS7B-223ENST00000611614 BLOC1S4Q9NUP1 217 aa15.39■□□□□ 0.05
COPS7B-223ENST00000611614 CWC15Q9P013 229 aaKnown RBP15.39■□□□□ 0.05
COPS7B-223ENST00000611614 CDC23Q9UJX2 597 aa15.39■□□□□ 0.05
COPS7B-223ENST00000611614 ERLIN1O75477 346 aa15.38■□□□□ 0.05
COPS7B-223ENST00000611614 LONRF2Q1L5Z9 754 aa15.38■□□□□ 0.05
COPS7B-223ENST00000611614 ZNF569Q5MCW4 686 aa15.38■□□□□ 0.05
COPS7B-223ENST00000611614 ERO1BQ86YB8 467 aa15.38■□□□□ 0.05
COPS7B-223ENST00000611614 CDK5RAP3Q96JB5 506 aa15.38■□□□□ 0.05
COPS7B-223ENST00000611614 AGBL1Q96MI9 1066 aa15.38■□□□□ 0.05
COPS7B-223ENST00000611614 ELP3Q9H9T3 547 aa15.38■□□□□ 0.05
COPS7B-223ENST00000611614 TMEM51Q9NW97 253 aa15.38■□□□□ 0.05
COPS7B-223ENST00000611614 HOXC10Q9NYD6 342 aa15.38■□□□□ 0.05
COPS7B-223ENST00000611614 PVALEFA0A1B0GWK0 134 aa15.38■□□□□ 0.05
COPS7B-223ENST00000611614 POTECB2RU33 542 aa15.38■□□□□ 0.05
COPS7B-223ENST00000611614 B4DLN1 442 aa15.38■□□□□ 0.05
COPS7B-223ENST00000611614 ALAS1P13196 640 aa15.38■□□□□ 0.05
COPS7B-223ENST00000611614 TAL1P17542 331 aaPredicted RBP15.38■□□□□ 0.05
COPS7B-223ENST00000611614 ZNF76P36508 570 aa15.38■□□□□ 0.05
COPS7B-223ENST00000611614 ARHGAP4P98171 946 aa15.38■□□□□ 0.05
COPS7B-223ENST00000611614 PPATQ06203 517 aa15.38■□□□□ 0.05
COPS7B-223ENST00000611614 MSANTD4Q8NCY6 345 aa15.38■□□□□ 0.05
COPS7B-223ENST00000611614 RAVER2Q9HCJ3 691 aaKnown RBP15.38■□□□□ 0.05
COPS7B-223ENST00000611614 RAB21Q9UL25 225 aa15.38■□□□□ 0.05
COPS7B-223ENST00000611614 MYMKA6NI61 221 aa15.37■□□□□ 0.05
COPS7B-223ENST00000611614 VWA5AO00534 786 aa15.37■□□□□ 0.05
COPS7B-223ENST00000611614 MCM6Q14566 821 aa15.37■□□□□ 0.05
COPS7B-223ENST00000611614 TSR1Q2NL82 804 aaKnown RBP15.37■□□□□ 0.05
COPS7B-223ENST00000611614 SH3D19Q5HYK7 790 aa15.37■□□□□ 0.05
COPS7B-223ENST00000611614 MOXD1Q6UVY6 613 aa15.37■□□□□ 0.05
COPS7B-223ENST00000611614 UNC13DQ70J99 1090 aa15.37■□□□□ 0.05
COPS7B-223ENST00000611614 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.37■□□□□ 0.05
COPS7B-223ENST00000611614 KIAA0895Q8NCT3 520 aa15.37■□□□□ 0.05
COPS7B-223ENST00000611614 LARP4BQ92615 738 aaKnown RBP15.37■□□□□ 0.05
COPS7B-223ENST00000611614 CNOT6LQ96LI5 555 aaKnown RBP15.37■□□□□ 0.05
COPS7B-223ENST00000611614 CHP1Q99653 195 aa15.37■□□□□ 0.05
COPS7B-223ENST00000611614 NUP58Q9BVL2 599 aa15.37■□□□□ 0.05
COPS7B-223ENST00000611614 MYO1AQ9UBC5 1043 aa15.37■□□□□ 0.05
COPS7B-223ENST00000611614 EPN1Q9Y6I3 576 aaPredicted RBP15.37■□□□□ 0.05
COPS7B-223ENST00000611614 OPLAHO14841 1288 aa15.37■□□□□ 0.05
COPS7B-223ENST00000611614 SREBF1P36956 1147 aa15.37■□□□□ 0.05
COPS7B-223ENST00000611614 ARHGAP25P42331 645 aa15.37■□□□□ 0.05
COPS7B-223ENST00000611614 KRT79Q5XKE5 535 aa15.37■□□□□ 0.05
COPS7B-223ENST00000611614 RAD54LQ92698 747 aa15.37■□□□□ 0.05
COPS7B-223ENST00000611614 OTUD5Q96G74 571 aa15.37■□□□□ 0.05
COPS7B-223ENST00000611614 GBP3Q9H0R5 595 aa15.37■□□□□ 0.05
COPS7B-223ENST00000611614 EIF3JO75822 258 aaKnown RBP15.36■□□□□ 0.05
COPS7B-223ENST00000611614 NDUFA10O95299 355 aa15.36■□□□□ 0.05
COPS7B-223ENST00000611614 HOXA7P31268 230 aaPredicted RBP15.36■□□□□ 0.05
COPS7B-223ENST00000611614 MTIF2P46199 727 aaKnown RBP15.36■□□□□ 0.05
COPS7B-223ENST00000611614 CENPPQ6IPU0 288 aa15.36■□□□□ 0.05
COPS7B-223ENST00000611614 CATSPERGQ6ZRH7 1159 aa15.36■□□□□ 0.05
COPS7B-223ENST00000611614 HDXQ7Z353 690 aa15.36■□□□□ 0.05
COPS7B-223ENST00000611614 SLC35F6Q8N357 371 aa15.36■□□□□ 0.05
COPS7B-223ENST00000611614 RETREG2Q8NC44 543 aa15.36■□□□□ 0.05
COPS7B-223ENST00000611614 SNX29Q8TEQ0 813 aa15.36■□□□□ 0.05
COPS7B-223ENST00000611614 ATG4CQ96DT6 458 aa15.36■□□□□ 0.05
COPS7B-223ENST00000611614 LRRC27Q9C0I9 530 aa15.36■□□□□ 0.05
COPS7B-223ENST00000611614 ZNF408Q9H9D4 720 aa15.36■□□□□ 0.05
COPS7B-223ENST00000611614 ZNF536O15090 1300 aa15.36■□□□□ 0.05
COPS7B-223ENST00000611614 CTAGE9A4FU28 777 aa15.36■□□□□ 0.05
COPS7B-223ENST00000611614 POTEMA6NI47 508 aa15.36■□□□□ 0.05
COPS7B-223ENST00000611614 SOCS7O14512 581 aa15.36■□□□□ 0.05
COPS7B-223ENST00000611614 DSG3P32926 999 aa15.36■□□□□ 0.05
COPS7B-223ENST00000611614 TBC1D8BQ0IIM8 1120 aa15.36■□□□□ 0.05
COPS7B-223ENST00000611614 TMEM119Q4V9L6 283 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms