RNA–Protein interactions for RNA: ENST00000611457.4

CBWD1-219, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 3,324 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-219ENST00000611457 CASTP20810 708 aaKnown RBP8.18□□□□□ -1.1
CBWD1-219ENST00000611457 ABCD1P33897 745 aa8.18□□□□□ -1.1
CBWD1-219ENST00000611457 HMGN5P82970 282 aaKnown RBP8.18□□□□□ -1.1
CBWD1-219ENST00000611457 ST3GAL1Q11201 340 aa8.18□□□□□ -1.1
CBWD1-219ENST00000611457 PPP4R3CPQ6ZMV5 832 aa8.18□□□□□ -1.1
CBWD1-219ENST00000611457 OR6J1Q8NGC5 347 aa8.18□□□□□ -1.1
CBWD1-219ENST00000611457 GLT1D1Q96MS3 346 aa8.18□□□□□ -1.1
CBWD1-219ENST00000611457 MTMR9Q96QG7 549 aa8.18□□□□□ -1.1
CBWD1-219ENST00000611457 ANO3Q9BYT9 981 aa8.18□□□□□ -1.1
CBWD1-219ENST00000611457 SMARCAD1Q9H4L7 1026 aa8.18□□□□□ -1.1
CBWD1-219ENST00000611457 OBSL1O75147 1896 aa8.18□□□□□ -1.1
CBWD1-219ENST00000611457 FRMPD2Q68DX3 1309 aaPredicted RBP8.18□□□□□ -1.1
CBWD1-219ENST00000611457 EVI5O60447 810 aa8.18□□□□□ -1.1
CBWD1-219ENST00000611457 PLEKHA8P1O95397 391 aa8.18□□□□□ -1.1
CBWD1-219ENST00000611457 ITGB5P18084 799 aa8.18□□□□□ -1.1
CBWD1-219ENST00000611457 MAGEA10P43363 369 aaPredicted RBP8.18□□□□□ -1.1
CBWD1-219ENST00000611457 CEP55Q53EZ4 464 aa8.18□□□□□ -1.1
CBWD1-219ENST00000611457 MARCH8Q5T0T0 291 aa8.18□□□□□ -1.1
CBWD1-219ENST00000611457 PDE12Q6L8Q7 609 aaKnown RBP8.18□□□□□ -1.1
CBWD1-219ENST00000611457 CLP1Q92989 425 aaKnown RBP8.18□□□□□ -1.1
CBWD1-219ENST00000611457 FTHL17Q9BXU8 183 aa8.18□□□□□ -1.1
CBWD1-219ENST00000611457 SENP6Q9GZR1 1112 aaPredicted RBP8.18□□□□□ -1.1
CBWD1-219ENST00000611457 TTC3P53804 2025 aa8.17□□□□□ -1.1
CBWD1-219ENST00000611457 FSCN2O14926 492 aa8.17□□□□□ -1.1
CBWD1-219ENST00000611457 PGK2P07205 417 aa8.17□□□□□ -1.1
CBWD1-219ENST00000611457 ADRB2P07550 413 aa8.17□□□□□ -1.1
CBWD1-219ENST00000611457 MFSD10Q14728 455 aa8.17□□□□□ -1.1
CBWD1-219ENST00000611457 TRIM60Q495X7 471 aa8.17□□□□□ -1.1
CBWD1-219ENST00000611457 TYW1BQ6NUM6 668 aa8.17□□□□□ -1.1
CBWD1-219ENST00000611457 SYNE3Q6ZMZ3 975 aa8.17□□□□□ -1.1
CBWD1-219ENST00000611457 CLEC17AQ6ZS10 378 aa8.17□□□□□ -1.1
CBWD1-219ENST00000611457 BBXQ8WY36 941 aaPredicted RBP8.17□□□□□ -1.1
CBWD1-219ENST00000611457 PSTPIP2Q9H939 334 aa8.17□□□□□ -1.1
CBWD1-219ENST00000611457 C1orf112Q9NSG2 853 aa8.17□□□□□ -1.1
CBWD1-219ENST00000611457 DENND4CQ5VZ89 1909 aa8.17□□□□□ -1.1
CBWD1-219ENST00000611457 MYH11P35749 1972 aa8.17□□□□□ -1.1
CBWD1-219ENST00000611457 SELPP16109 830 aa8.17□□□□□ -1.1
CBWD1-219ENST00000611457 PTMSP20962 102 aa8.17□□□□□ -1.1
CBWD1-219ENST00000611457 METAP2P50579 478 aaKnown RBP eCLIP8.17□□□□□ -1.1
CBWD1-219ENST00000611457 FXR2P51116 673 aaKnown RBP eCLIP8.17□□□□□ -1.1
CBWD1-219ENST00000611457 TMEM184AQ6ZMB5 413 aa8.17□□□□□ -1.1
CBWD1-219ENST00000611457 C16orf59Q7L2K0 433 aa8.17□□□□□ -1.1
CBWD1-219ENST00000611457 POLR3CQ9BUI4 534 aaPredicted RBP8.17□□□□□ -1.1
CBWD1-219ENST00000611457 GZF1Q9H116 711 aaPredicted RBP8.17□□□□□ -1.1
CBWD1-219ENST00000611457 STARD7Q9NQZ5 370 aa8.17□□□□□ -1.1
CBWD1-219ENST00000611457 CHST12Q9NRB3 414 aa8.17□□□□□ -1.1
CBWD1-219ENST00000611457 CTDP1Q9Y5B0 961 aaPredicted RBP8.17□□□□□ -1.1
CBWD1-219ENST00000611457 PLXNA3P51805 1871 aa8.17□□□□□ -1.1
CBWD1-219ENST00000611457 MAGEB2O15479 319 aa8.16□□□□□ -1.1
CBWD1-219ENST00000611457 LGALS2P05162 132 aa8.16□□□□□ -1.1
CBWD1-219ENST00000611457 IQCF3P0C7M6 154 aa8.16□□□□□ -1.1
CBWD1-219ENST00000611457 MCM4P33991 863 aa8.16□□□□□ -1.1
CBWD1-219ENST00000611457 ADCYAP1R1P41586 468 aa8.16□□□□□ -1.1
CBWD1-219ENST00000611457 SP2Q02086 613 aa8.16□□□□□ -1.1
CBWD1-219ENST00000611457 ARHGEF16Q5VV41 709 aa8.16□□□□□ -1.1
CBWD1-219ENST00000611457 Q6ZUG5 572 aa8.16□□□□□ -1.1
CBWD1-219ENST00000611457 CMTR2Q8IYT2 770 aaKnown RBP8.16□□□□□ -1.1
CBWD1-219ENST00000611457 ANP32BQ92688 251 aaKnown RBP8.16□□□□□ -1.1
CBWD1-219ENST00000611457 P2RX5Q93086 422 aa8.16□□□□□ -1.1
CBWD1-219ENST00000611457 GPCPD1Q9NPB8 672 aa8.16□□□□□ -1.1
CBWD1-219ENST00000611457 KCND2Q9NZV8 630 aa8.16□□□□□ -1.1
CBWD1-219ENST00000611457 ZNF215Q9UL58 517 aaPredicted RBP8.16□□□□□ -1.1
CBWD1-219ENST00000611457 GOLGA8AA7E2F4 631 aa8.16□□□□□ -1.1
CBWD1-219ENST00000611457 GOLGA8BA8MQT2 603 aa8.16□□□□□ -1.1
CBWD1-219ENST00000611457 B4GALT4O60513 344 aa8.16□□□□□ -1.1
CBWD1-219ENST00000611457 RB1P06400 928 aa8.16□□□□□ -1.1
CBWD1-219ENST00000611457 NCLP19338 710 aaKnown RBP8.16□□□□□ -1.1
CBWD1-219ENST00000611457 HOXA13P31271 388 aaPredicted RBP8.16□□□□□ -1.1
CBWD1-219ENST00000611457 RFC5P40937 340 aa8.16□□□□□ -1.1
CBWD1-219ENST00000611457 HAND2P61296 217 aa8.16□□□□□ -1.1
CBWD1-219ENST00000611457 UBE3AQ05086 875 aa8.16□□□□□ -1.1
CBWD1-219ENST00000611457 ZNF410Q86VK4 478 aa8.16□□□□□ -1.1
CBWD1-219ENST00000611457 C4orf19Q8IY42 314 aa8.16□□□□□ -1.1
CBWD1-219ENST00000611457 NSUN7Q8NE18 718 aaKnown RBP8.16□□□□□ -1.1
CBWD1-219ENST00000611457 SEPT1Q8WYJ6 367 aa8.16□□□□□ -1.1
CBWD1-219ENST00000611457 PANK2Q9BZ23 570 aa8.16□□□□□ -1.1
CBWD1-219ENST00000611457 GRPEL1Q9HAV7 217 aa8.16□□□□□ -1.1
CBWD1-219ENST00000611457 ANKEF1Q9NU02 776 aa8.16□□□□□ -1.1
CBWD1-219ENST00000611457 TRAK2O60296 914 aa8.16□□□□□ -1.1
CBWD1-219ENST00000611457 PDIA5Q14554 519 aa8.16□□□□□ -1.1
CBWD1-219ENST00000611457 PUS10Q3MIT2 529 aaKnown RBP8.16□□□□□ -1.1
CBWD1-219ENST00000611457 ATL3Q6DD88 541 aa8.16□□□□□ -1.1
CBWD1-219ENST00000611457 CYP26C1Q6V0L0 522 aa8.16□□□□□ -1.1
CBWD1-219ENST00000611457 SLFN12Q8IYM2 578 aa8.16□□□□□ -1.1
CBWD1-219ENST00000611457 C4orf32Q8N8J7 132 aa8.16□□□□□ -1.1
CBWD1-219ENST00000611457 ATP8B4Q8TF62 1192 aa8.16□□□□□ -1.1
CBWD1-219ENST00000611457 JPH2Q9BR39 696 aaPredicted RBP8.16□□□□□ -1.1
CBWD1-219ENST00000611457 MTIF3Q9H2K0 278 aaKnown RBP8.16□□□□□ -1.1
CBWD1-219ENST00000611457 CIZ1Q9ULV3 898 aaPredicted RBP8.16□□□□□ -1.1
CBWD1-219ENST00000611457 MAFFQ9ULX9 164 aa8.16□□□□□ -1.1
CBWD1-219ENST00000611457 CEP131Q9UPN4 1083 aa8.16□□□□□ -1.1
CBWD1-219ENST00000611457 PTPRDP23468 1912 aa8.16□□□□□ -1.1
CBWD1-219ENST00000611457 HBP1O60381 514 aa8.15□□□□□ -1.1
CBWD1-219ENST00000611457 CAPN15O75808 1086 aa8.15□□□□□ -1.1
CBWD1-219ENST00000611457 BRD1O95696 1058 aa8.15□□□□□ -1.1
CBWD1-219ENST00000611457 MMP1P03956 469 aa8.15□□□□□ -1.1
CBWD1-219ENST00000611457 FDPSP14324 419 aaKnown RBP8.15□□□□□ -1.1
CBWD1-219ENST00000611457 ERVK-21P61565 698 aa8.15□□□□□ -1.1
CBWD1-219ENST00000611457 ZYXQ15942 572 aaKnown RBP8.15□□□□□ -1.1
CBWD1-219ENST00000611457 CSPP1Q1MSJ5 1256 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms