RNA–Protein interactions for RNA: ENST00000611067.4

SEMA3B-210, Transcript of semaphorin 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-210ENST00000611067 SMARCAL1Q9NZC9 954 aa21.02■□□□□ 0.96
SEMA3B-210ENST00000611067 PCDHA4Q9UN74 947 aa21.02■□□□□ 0.96
SEMA3B-210ENST00000611067 COL2A1P02458 1487 aaPredicted RBP21.02■□□□□ 0.96
SEMA3B-210ENST00000611067 KLRF2D3W0D1 207 aa21.02■□□□□ 0.95
SEMA3B-210ENST00000611067 KRT14P02533 472 aa21.02■□□□□ 0.95
SEMA3B-210ENST00000611067 EIF4A3P38919 411 aaKnown RBP21.02■□□□□ 0.95
SEMA3B-210ENST00000611067 PDE4DQ08499 809 aa21.02■□□□□ 0.95
SEMA3B-210ENST00000611067 SH2D3CQ8N5H7 860 aa21.02■□□□□ 0.95
SEMA3B-210ENST00000611067 PSMB7Q99436 277 aa21.02■□□□□ 0.95
SEMA3B-210ENST00000611067 EPN3Q9H201 632 aa21.02■□□□□ 0.95
SEMA3B-210ENST00000611067 GDF3Q9NR23 364 aa21.02■□□□□ 0.95
SEMA3B-210ENST00000611067 SH3GLB2Q9NR46 395 aa21.02■□□□□ 0.95
SEMA3B-210ENST00000611067 RBM12Q9NTZ6 932 aaKnown RBP21.02■□□□□ 0.95
SEMA3B-210ENST00000611067 EHD2Q9NZN4 543 aa21.02■□□□□ 0.95
SEMA3B-210ENST00000611067 RNF14Q9UBS8 474 aa21.02■□□□□ 0.95
SEMA3B-210ENST00000611067 CLRN2A0PK11 232 aa21.01■□□□□ 0.95
SEMA3B-210ENST00000611067 FAM196BA6NMK8 535 aa21.01■□□□□ 0.95
SEMA3B-210ENST00000611067 GOLGA8HP0CJ92 632 aa21.01■□□□□ 0.95
SEMA3B-210ENST00000611067 LSP1P33241 339 aa21.01■□□□□ 0.95
SEMA3B-210ENST00000611067 ATP1A2P50993 1020 aa21.01■□□□□ 0.95
SEMA3B-210ENST00000611067 CERKLQ49MI3 558 aaPredicted RBP21.01■□□□□ 0.95
SEMA3B-210ENST00000611067 CFAP58Q5T655 872 aa21.01■□□□□ 0.95
SEMA3B-210ENST00000611067 CD302Q8IX05 232 aa21.01■□□□□ 0.95
SEMA3B-210ENST00000611067 LRRC47Q8N1G4 583 aaKnown RBP21.01■□□□□ 0.95
SEMA3B-210ENST00000611067 GPATCH11Q8N954 259 aa21.01■□□□□ 0.95
SEMA3B-210ENST00000611067 LRRC15Q8TF66 581 aa21.01■□□□□ 0.95
SEMA3B-210ENST00000611067 PLIN2Q99541 437 aa21.01■□□□□ 0.95
SEMA3B-210ENST00000611067 TMEM60Q9H2L4 133 aa21.01■□□□□ 0.95
SEMA3B-210ENST00000611067 TCP10L2B9ZVM9 353 aa21.01■□□□□ 0.95
SEMA3B-210ENST00000611067 AKR1B10O60218 316 aa21.01■□□□□ 0.95
SEMA3B-210ENST00000611067 SETQ01105 290 aaPredicted RBP21.01■□□□□ 0.95
SEMA3B-210ENST00000611067 STK4Q13043 487 aa21.01■□□□□ 0.95
SEMA3B-210ENST00000611067 TNIP1Q15025 636 aa21.01■□□□□ 0.95
SEMA3B-210ENST00000611067 KCTD16Q68DU8 428 aa21.01■□□□□ 0.95
SEMA3B-210ENST00000611067 MREGQ8N565 214 aa21.01■□□□□ 0.95
SEMA3B-210ENST00000611067 RNPC3Q96LT9 517 aaKnown RBP21.01■□□□□ 0.95
SEMA3B-210ENST00000611067 CSRNP1Q96S65 589 aa21.01■□□□□ 0.95
SEMA3B-210ENST00000611067 TLR10Q9BXR5 811 aa21.01■□□□□ 0.95
SEMA3B-210ENST00000611067 TSKSQ9UJT2 592 aa21.01■□□□□ 0.95
SEMA3B-210ENST00000611067 SIK3Q9Y2K2 1263 aa21.01■□□□□ 0.95
SEMA3B-210ENST00000611067 H0YHG0 523 aa21■□□□□ 0.95
SEMA3B-210ENST00000611067 NAP1L1P55209 391 aaKnown RBP21■□□□□ 0.95
SEMA3B-210ENST00000611067 CFAP221Q4G0U5 840 aa21■□□□□ 0.95
SEMA3B-210ENST00000611067 USP17L2Q6R6M4 530 aa21■□□□□ 0.95
SEMA3B-210ENST00000611067 CLEC10AQ8IUN9 316 aa21■□□□□ 0.95
SEMA3B-210ENST00000611067 C1orf131Q8NDD1 294 aaKnown RBP21■□□□□ 0.95
SEMA3B-210ENST00000611067 CCDC43Q96MW1 224 aaKnown RBP21■□□□□ 0.95
SEMA3B-210ENST00000611067 SPZ1Q9BXG8 430 aa21■□□□□ 0.95
SEMA3B-210ENST00000611067 TRIM9Q9C026 710 aa21■□□□□ 0.95
SEMA3B-210ENST00000611067 A1CFQ9NQ94 594 aaKnown RBP21■□□□□ 0.95
SEMA3B-210ENST00000611067 ZNF70Q9UC06 446 aaPredicted RBP21■□□□□ 0.95
SEMA3B-210ENST00000611067 GREB1LQ9C091 1923 aaPredicted RBP21■□□□□ 0.95
SEMA3B-210ENST00000611067 LTBP3Q9NS15 1303 aa20.99■□□□□ 0.95
SEMA3B-210ENST00000611067 ZNF233A6NK53 670 aa20.99■□□□□ 0.95
SEMA3B-210ENST00000611067 M0R2N6 131 aa20.99■□□□□ 0.95
SEMA3B-210ENST00000611067 LAD1O00515 517 aa20.99■□□□□ 0.95
SEMA3B-210ENST00000611067 SLURP2P0DP57 97 aa20.99■□□□□ 0.95
SEMA3B-210ENST00000611067 MAP2K2P36507 400 aa20.99■□□□□ 0.95
SEMA3B-210ENST00000611067 MAGEA1P43355 309 aa20.99■□□□□ 0.95
SEMA3B-210ENST00000611067 ATP2B2Q01814 1243 aa20.99■□□□□ 0.95
SEMA3B-210ENST00000611067 PAK2Q13177 524 aa20.99■□□□□ 0.95
SEMA3B-210ENST00000611067 COBLL1Q53SF7 1204 aa20.99■□□□□ 0.95
SEMA3B-210ENST00000611067 NAA35Q5VZE5 725 aa20.99■□□□□ 0.95
SEMA3B-210ENST00000611067 CCDC194A0A1B0GVG4 234 aa20.99■□□□□ 0.95
SEMA3B-210ENST00000611067 NCK2O43639 380 aa20.99■□□□□ 0.95
SEMA3B-210ENST00000611067 PDHBP11177 359 aa20.99■□□□□ 0.95
SEMA3B-210ENST00000611067 PRPHP41219 470 aa20.99■□□□□ 0.95
SEMA3B-210ENST00000611067 VWA3BQ502W6 1294 aa20.99■□□□□ 0.95
SEMA3B-210ENST00000611067 KLHDC7AQ5VTJ3 777 aa20.99■□□□□ 0.95
SEMA3B-210ENST00000611067 RNF10Q8N5U6 811 aaKnown RBP20.99■□□□□ 0.95
SEMA3B-210ENST00000611067 MTMR14Q8NCE2 650 aa20.99■□□□□ 0.95
SEMA3B-210ENST00000611067 RASGRP4Q8TDF6 673 aa20.99■□□□□ 0.95
SEMA3B-210ENST00000611067 C7orf25Q9BPX7 421 aa20.99■□□□□ 0.95
SEMA3B-210ENST00000611067 SALL4Q9UJQ4 1053 aa20.99■□□□□ 0.95
SEMA3B-210ENST00000611067 USP17L5A8MUK1 530 aa20.98■□□□□ 0.95
SEMA3B-210ENST00000611067 MYO1FO00160 1098 aa20.98■□□□□ 0.95
SEMA3B-210ENST00000611067 EPHB6O15197 1021 aa20.98■□□□□ 0.95
SEMA3B-210ENST00000611067 NKRFO15226 690 aaKnown RBP eCLIP20.98■□□□□ 0.959e-6■□□□□ 8.3
SEMA3B-210ENST00000611067 CYTH3O43739 400 aa20.98■□□□□ 0.95
SEMA3B-210ENST00000611067 GLI1P08151 1106 aa20.98■□□□□ 0.95
SEMA3B-210ENST00000611067 CARSP49589 748 aaKnown RBP20.98■□□□□ 0.95
SEMA3B-210ENST00000611067 SPDYE2Q495Y8 402 aa20.98■□□□□ 0.95
SEMA3B-210ENST00000611067 TATDN1Q6P1N9 297 aa20.98■□□□□ 0.95
SEMA3B-210ENST00000611067 VEZTQ9HBM0 779 aa20.98■□□□□ 0.95
SEMA3B-210ENST00000611067 PPP1R37O75864 691 aa20.98■□□□□ 0.95
SEMA3B-210ENST00000611067 PLCG1P19174 1290 aa20.98■□□□□ 0.95
SEMA3B-210ENST00000611067 NR1D1P20393 614 aa20.98■□□□□ 0.95
SEMA3B-210ENST00000611067 ASPRV1Q53RT3 343 aa20.98■□□□□ 0.95
SEMA3B-210ENST00000611067 ZNF473Q8WTR7 871 aaKnown RBP20.98■□□□□ 0.95
SEMA3B-210ENST00000611067 NOX5Q96PH1 765 aa20.98■□□□□ 0.95
SEMA3B-210ENST00000611067 CXorf56Q9H5V9 222 aa20.98■□□□□ 0.95
SEMA3B-210ENST00000611067 GGA2Q9UJY4 613 aa20.98■□□□□ 0.95
SEMA3B-210ENST00000611067 NFU1Q9UMS0 254 aa20.98■□□□□ 0.95
SEMA3B-210ENST00000611067 MYH4Q9Y623 1939 aa20.98■□□□□ 0.95
SEMA3B-210ENST00000611067 SRRM3A6NNA2 597 aaPredicted RBP20.97■□□□□ 0.95
SEMA3B-210ENST00000611067 FCER1AP12319 257 aa20.97■□□□□ 0.95
SEMA3B-210ENST00000611067 SMARCA1P28370 1054 aa20.97■□□□□ 0.95
SEMA3B-210ENST00000611067 ASIC1P78348 528 aa20.97■□□□□ 0.95
SEMA3B-210ENST00000611067 RPAINQ86UA6 219 aa20.97■□□□□ 0.95
SEMA3B-210ENST00000611067 CCDC84Q86UT8 332 aaPredicted RBP20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms