RNA–Protein interactions for RNA: ENST00000609232.5

CTCFL-222, Transcript of CCCTC-binding factor like, human

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 3,668 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTCFL-222	ENST00000609232	KCNJ12	Q14500	433 aa		10.87	□□□□□ -0.67
CTCFL-222	ENST00000609232	RRAGA	Q7L523	313 aa		10.87	□□□□□ -0.67
CTCFL-222	ENST00000609232	C10orf67	Q8IYJ2	551 aa		10.87	□□□□□ -0.67
CTCFL-222	ENST00000609232	C4orf32	Q8N8J7	132 aa		10.87	□□□□□ -0.67
CTCFL-222	ENST00000609232	KIFC3	Q9BVG8	833 aa		10.87	□□□□□ -0.67
CTCFL-222	ENST00000609232	DISC1	Q9NRI5	854 aa		10.87	□□□□□ -0.67
CTCFL-222	ENST00000609232	FZD9	O00144	591 aa		10.87	□□□□□ -0.67
CTCFL-222	ENST00000609232	USO1	O60763	962 aa	Known RBP	10.87	□□□□□ -0.67
CTCFL-222	ENST00000609232	CAPN2	P17655	700 aa		10.87	□□□□□ -0.67
CTCFL-222	ENST00000609232	ZNF280A	P59817	542 aa	Predicted RBP	10.87	□□□□□ -0.67
CTCFL-222	ENST00000609232	LMBRD2	Q68DH5	695 aa	Predicted RBP	10.87	□□□□□ -0.67
CTCFL-222	ENST00000609232	MLKL	Q8NB16	471 aa		10.87	□□□□□ -0.67
CTCFL-222	ENST00000609232	SPIRE2	Q8WWL2	714 aa		10.87	□□□□□ -0.67
CTCFL-222	ENST00000609232	WDR87	Q6ZQQ6	2873 aa		10.87	□□□□□ -0.67
CTCFL-222	ENST00000609232	KIF2A	O00139	706 aa	Predicted RBP	10.86	□□□□□ -0.67
CTCFL-222	ENST00000609232	SEC31A	O94979	1220 aa	Known RBP	10.86	□□□□□ -0.67
CTCFL-222	ENST00000609232	GYS2	P54840	703 aa		10.86	□□□□□ -0.67
CTCFL-222	ENST00000609232	KCNA1	Q09470	495 aa		10.86	□□□□□ -0.67
CTCFL-222	ENST00000609232	GADL1	Q6ZQY3	521 aa		10.86	□□□□□ -0.67
CTCFL-222	ENST00000609232	SEPT14	Q6ZU15	432 aa		10.86	□□□□□ -0.67
CTCFL-222	ENST00000609232	DDX12P	Q92771	950 aa		10.86	□□□□□ -0.67
CTCFL-222	ENST00000609232	HOOK2	Q96ED9	719 aa		10.86	□□□□□ -0.67
CTCFL-222	ENST00000609232	TCHP	Q9BT92	498 aa		10.86	□□□□□ -0.67
CTCFL-222	ENST00000609232	MRPL44	Q9H9J2	332 aa	Known RBP	10.86	□□□□□ -0.67
CTCFL-222	ENST00000609232	SUGCT	Q9HAC7	445 aa		10.86	□□□□□ -0.67
CTCFL-222	ENST00000609232	HDAC6	Q9UBN7	1215 aa		10.86	□□□□□ -0.67
CTCFL-222	ENST00000609232	LRRN2	O75325	713 aa		10.86	□□□□□ -0.67
CTCFL-222	ENST00000609232	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	10.86	□□□□□ -0.67
CTCFL-222	ENST00000609232	CYFIP1	Q7L576	1253 aa		10.86	□□□□□ -0.67
CTCFL-222	ENST00000609232	AGPAT5	Q9NUQ2	364 aa		10.86	□□□□□ -0.67
CTCFL-222	ENST00000609232	DUSP10	Q9Y6W6	482 aa		10.86	□□□□□ -0.67
CTCFL-222	ENST00000609232	ABCB4	P21439	1286 aa		10.86	□□□□□ -0.67
CTCFL-222	ENST00000609232	TRAF1	Q13077	416 aa		10.86	□□□□□ -0.67
CTCFL-222	ENST00000609232	PLA2G4D	Q86XP0	818 aa		10.86	□□□□□ -0.67
CTCFL-222	ENST00000609232	PCDH10	Q9P2E7	1040 aa		10.86	□□□□□ -0.67
CTCFL-222	ENST00000609232	DLEC1	Q9Y238	1755 aa		10.85	□□□□□ -0.67
CTCFL-222	ENST00000609232	TBC1D12	O60347	775 aa		10.85	□□□□□ -0.67
CTCFL-222	ENST00000609232	PLEK	P08567	350 aa	Predicted RBP	10.85	□□□□□ -0.67
CTCFL-222	ENST00000609232	FXR1	P51114	621 aa	Known RBP eCLIP	10.85	□□□□□ -0.67	2e-8	■□□□□ 9.7
CTCFL-222	ENST00000609232	ARHGAP4	P98171	946 aa		10.85	□□□□□ -0.67
CTCFL-222	ENST00000609232	SEZ6	Q53EL9	994 aa		10.85	□□□□□ -0.67
CTCFL-222	ENST00000609232	TAB3	Q8N5C8	712 aa	Predicted RBP	10.85	□□□□□ -0.67
CTCFL-222	ENST00000609232	GPRC5D	Q9NZD1	345 aa		10.85	□□□□□ -0.67
CTCFL-222	ENST00000609232	CWC15	Q9P013	229 aa	Known RBP	10.85	□□□□□ -0.67
CTCFL-222	ENST00000609232	GCOM1	H8Y6P7	765 aa	Predicted RBP	10.85	□□□□□ -0.67
CTCFL-222	ENST00000609232	CBFA2T2	O43439	604 aa		10.85	□□□□□ -0.67
CTCFL-222	ENST00000609232	GTPBP6	O43824	516 aa	Predicted RBP	10.85	□□□□□ -0.67
CTCFL-222	ENST00000609232	POLR2M	P0CAP2	368 aa		10.85	□□□□□ -0.67
CTCFL-222	ENST00000609232	MDM2	Q00987	491 aa	Predicted RBP	10.85	□□□□□ -0.67
CTCFL-222	ENST00000609232	KRT31	Q15323	416 aa		10.85	□□□□□ -0.67
CTCFL-222	ENST00000609232	APOBEC3F	Q8IUX4	373 aa	Known RBP	10.85	□□□□□ -0.67
CTCFL-222	ENST00000609232	TXLNB	Q8N3L3	684 aa		10.85	□□□□□ -0.67
CTCFL-222	ENST00000609232	BICD1	Q96G01	975 aa		10.85	□□□□□ -0.67
CTCFL-222	ENST00000609232	AK8	Q96MA6	479 aa		10.85	□□□□□ -0.67
CTCFL-222	ENST00000609232	SCLT1	Q96NL6	688 aa		10.85	□□□□□ -0.67
CTCFL-222	ENST00000609232	RASSF4	Q9H2L5	321 aa		10.85	□□□□□ -0.67
CTCFL-222	ENST00000609232	ZNHIT6	Q9NWK9	470 aa	Known RBP	10.85	□□□□□ -0.67
CTCFL-222	ENST00000609232	PACSIN2	Q9UNF0	486 aa	Predicted RBP	10.85	□□□□□ -0.67
CTCFL-222	ENST00000609232	TISP43	B9A030	160 aa		10.85	□□□□□ -0.67
CTCFL-222	ENST00000609232	GAS7	O60861	476 aa		10.85	□□□□□ -0.67
CTCFL-222	ENST00000609232	TBCA	O75347	108 aa	Known RBP	10.85	□□□□□ -0.67
CTCFL-222	ENST00000609232	CASQ1	P31415	396 aa		10.85	□□□□□ -0.67
CTCFL-222	ENST00000609232	CYP2C19	P33261	490 aa		10.85	□□□□□ -0.67
CTCFL-222	ENST00000609232	NF2	P35240	595 aa		10.85	□□□□□ -0.67
CTCFL-222	ENST00000609232	PRPH	P41219	470 aa		10.85	□□□□□ -0.67
CTCFL-222	ENST00000609232	NAA35	Q5VZE5	725 aa		10.85	□□□□□ -0.67
CTCFL-222	ENST00000609232	ZBTB10	Q96DT7	871 aa		10.85	□□□□□ -0.67
CTCFL-222	ENST00000609232	OTUD5	Q96G74	571 aa		10.85	□□□□□ -0.67
CTCFL-222	ENST00000609232	MTR	Q99707	1265 aa		10.85	□□□□□ -0.67
CTCFL-222	ENST00000609232	QSER1	Q2KHR3	1735 aa		10.84	□□□□□ -0.67
CTCFL-222	ENST00000609232	RNF225	M0QZC1	329 aa	Predicted RBP	10.84	□□□□□ -0.67
CTCFL-222	ENST00000609232	CLCN6	P51797	869 aa		10.84	□□□□□ -0.67
CTCFL-222	ENST00000609232	SPECC1L	Q69YQ0	1117 aa		10.84	□□□□□ -0.67
CTCFL-222	ENST00000609232	FAM160B2	Q86V87	743 aa		10.84	□□□□□ -0.67
CTCFL-222	ENST00000609232	LDHD	Q86WU2	507 aa		10.84	□□□□□ -0.67
CTCFL-222	ENST00000609232	SULF1	Q8IWU6	871 aa		10.84	□□□□□ -0.67
CTCFL-222	ENST00000609232	ZBED3	Q96IU2	234 aa	Predicted RBP	10.84	□□□□□ -0.67
CTCFL-222	ENST00000609232	GSDMA	Q96QA5	445 aa		10.84	□□□□□ -0.67
CTCFL-222	ENST00000609232	SPAG5	Q96R06	1193 aa		10.84	□□□□□ -0.67
CTCFL-222	ENST00000609232	SYT17	Q9BSW7	474 aa		10.84	□□□□□ -0.67
CTCFL-222	ENST00000609232	FGFBP2	Q9BYJ0	223 aa		10.84	□□□□□ -0.67
CTCFL-222	ENST00000609232	RMND1	Q9NWS8	449 aa		10.84	□□□□□ -0.67
CTCFL-222	ENST00000609232	MRPL11	Q9Y3B7	192 aa	Known RBP	10.84	□□□□□ -0.67
CTCFL-222	ENST00000609232	KIAA0100	Q14667	2235 aa	Known RBP	10.84	□□□□□ -0.67
CTCFL-222	ENST00000609232	AKR1B15	C9JRZ8	316 aa	Predicted RBP	10.84	□□□□□ -0.67
CTCFL-222	ENST00000609232	NFIB	O00712	420 aa		10.84	□□□□□ -0.67
CTCFL-222	ENST00000609232	CALCA	P01258	141 aa		10.84	□□□□□ -0.67
CTCFL-222	ENST00000609232	NPEPPS	P55786	919 aa		10.84	□□□□□ -0.67
CTCFL-222	ENST00000609232	AMPD3	Q01432	767 aa		10.84	□□□□□ -0.67
CTCFL-222	ENST00000609232	C2CD6	Q53TS8	623 aa		10.84	□□□□□ -0.67
CTCFL-222	ENST00000609232	NCAPG2	Q86XI2	1143 aa		10.84	□□□□□ -0.67
CTCFL-222	ENST00000609232	GPC2	Q8N158	579 aa		10.84	□□□□□ -0.67
CTCFL-222	ENST00000609232	TRIML1	Q8N9V2	468 aa		10.84	□□□□□ -0.67
CTCFL-222	ENST00000609232	DCPS	Q96C86	337 aa	Known RBP	10.84	□□□□□ -0.67
CTCFL-222	ENST00000609232	MTMR8	Q96EF0	704 aa		10.84	□□□□□ -0.67
CTCFL-222	ENST00000609232	WDR24	Q96S15	920 aa		10.84	□□□□□ -0.67
CTCFL-222	ENST00000609232	FEZ2	Q9UHY8	353 aa	Predicted RBP	10.84	□□□□□ -0.67
CTCFL-222	ENST00000609232	FEM1B	Q9UK73	627 aa		10.84	□□□□□ -0.67
CTCFL-222	ENST00000609232	LUC7L2	Q9Y383	392 aa	Known RBP	10.84	□□□□□ -0.67
CTCFL-222	ENST00000609232	MYH4	Q9Y623	1939 aa		10.84	□□□□□ -0.67

Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms