RNA–Protein interactions for RNA: ENST00000609024.5

CHMP4A-211, Transcript of charged multivesicular body protein 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4A, Length 735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-211ENST00000609024 TAF2Q6P1X5 1199 aa20.05■□□□□ 0.8
CHMP4A-211ENST00000609024 RNF135Q8IUD6 432 aa20.05■□□□□ 0.8
CHMP4A-211ENST00000609024 PIGSQ96S52 555 aa20.05■□□□□ 0.8
CHMP4A-211ENST00000609024 GPR20Q99678 358 aa20.05■□□□□ 0.8
CHMP4A-211ENST00000609024 DSCC1Q9BVC3 393 aa20.05■□□□□ 0.8
CHMP4A-211ENST00000609024 RTEL1Q9NZ71 1219 aa20.05■□□□□ 0.8
CHMP4A-211ENST00000609024 ICAM3P32942 547 aa20.04■□□□□ 0.8
CHMP4A-211ENST00000609024 CTC1Q2NKJ3 1217 aa20.04■□□□□ 0.8
CHMP4A-211ENST00000609024 HERC4Q5GLZ8 1057 aaPredicted RBP20.04■□□□□ 0.8
CHMP4A-211ENST00000609024 TRIM50Q86XT4 487 aa20.04■□□□□ 0.8
CHMP4A-211ENST00000609024 GIMAP8Q8ND71 665 aaPredicted RBP20.04■□□□□ 0.8
CHMP4A-211ENST00000609024 LMBR1Q8WVP7 490 aa20.04■□□□□ 0.8
CHMP4A-211ENST00000609024 CUL5Q93034 780 aa20.04■□□□□ 0.8
CHMP4A-211ENST00000609024 MTMR8Q96EF0 704 aa20.04■□□□□ 0.8
CHMP4A-211ENST00000609024 PLVAPQ9BX97 442 aa20.04■□□□□ 0.8
CHMP4A-211ENST00000609024 OSBPL7Q9BZF2 842 aa20.04■□□□□ 0.8
CHMP4A-211ENST00000609024 MAD2L2Q9UI95 211 aa20.04■□□□□ 0.8
CHMP4A-211ENST00000609024 SPATA31C2B4DYI2 1134 aa20.03■□□□□ 0.8
CHMP4A-211ENST00000609024 HDAC1Q13547 482 aaPredicted RBP20.03■□□□□ 0.8
CHMP4A-211ENST00000609024 PKN1Q16512 942 aa20.03■□□□□ 0.8
CHMP4A-211ENST00000609024 NLRX1Q86UT6 975 aa20.03■□□□□ 0.8
CHMP4A-211ENST00000609024 SUGP1Q8IWZ8 645 aaKnown RBP20.03■□□□□ 0.8
CHMP4A-211ENST00000609024 SMARCC2Q8TAQ2 1214 aa20.03■□□□□ 0.8
CHMP4A-211ENST00000609024 PRRX2Q99811 253 aa20.03■□□□□ 0.8
CHMP4A-211ENST00000609024 BCAS3Q9H6U6 928 aa20.03■□□□□ 0.8
CHMP4A-211ENST00000609024 PNMA6FA0A0J9YX94 578 aa20.02■□□□□ 0.8
CHMP4A-211ENST00000609024 PALM3A6NDB9 673 aaPredicted RBP20.02■□□□□ 0.8
CHMP4A-211ENST00000609024 MMP1P03956 469 aa20.02■□□□□ 0.8
CHMP4A-211ENST00000609024 DLX2Q07687 328 aaPredicted RBP20.02■□□□□ 0.8
CHMP4A-211ENST00000609024 B4GALNT3Q6L9W6 998 aa20.02■□□□□ 0.8
CHMP4A-211ENST00000609024 EDAQ92838 391 aa20.02■□□□□ 0.8
CHMP4A-211ENST00000609024 INPP4AQ96PE3 977 aaPredicted RBP20.02■□□□□ 0.8
CHMP4A-211ENST00000609024 ALG13Q9NP73 1137 aaKnown RBP20.02■□□□□ 0.8
CHMP4A-211ENST00000609024 ENPP3O14638 875 aa20.01■□□□□ 0.79
CHMP4A-211ENST00000609024 CHRNA1P02708 482 aa20.01■□□□□ 0.79
CHMP4A-211ENST00000609024 PTPN5P54829 565 aa20.01■□□□□ 0.79
CHMP4A-211ENST00000609024 PPFIA1Q13136 1202 aa20.01■□□□□ 0.79
CHMP4A-211ENST00000609024 CLP1Q92989 425 aaKnown RBP20.01■□□□□ 0.79
CHMP4A-211ENST00000609024 PBXIP1Q96AQ6 731 aa20.01■□□□□ 0.79
CHMP4A-211ENST00000609024 KAT6AQ92794 2004 aa20.01■□□□□ 0.79
CHMP4A-211ENST00000609024 M0QZ92 97 aa20■□□□□ 0.79
CHMP4A-211ENST00000609024 TBX10O75333 385 aa20■□□□□ 0.79
CHMP4A-211ENST00000609024 RPLP2P05387 115 aaKnown RBP20■□□□□ 0.79
CHMP4A-211ENST00000609024 GTF2F1P35269 517 aaKnown RBP eCLIP20■□□□□ 0.79
CHMP4A-211ENST00000609024 MRPS9P82933 396 aaKnown RBP20■□□□□ 0.79
CHMP4A-211ENST00000609024 ADAM15Q13444 863 aa20■□□□□ 0.79
CHMP4A-211ENST00000609024 GRM4Q14833 912 aa20■□□□□ 0.79
CHMP4A-211ENST00000609024 SART3Q15020 963 aaKnown RBP20■□□□□ 0.79
CHMP4A-211ENST00000609024 PIBF1Q8WXW3 757 aa20■□□□□ 0.79
CHMP4A-211ENST00000609024 GLG1Q92896 1179 aa20■□□□□ 0.79
CHMP4A-211ENST00000609024 SENP7Q9BQF6 1050 aa20■□□□□ 0.79
CHMP4A-211ENST00000609024 RIOX1Q9H6W3 641 aa20■□□□□ 0.79
CHMP4A-211ENST00000609024 TUBE1Q9UJT0 475 aa20■□□□□ 0.79
CHMP4A-211ENST00000609024 PLAGL2Q9UPG8 496 aa20■□□□□ 0.79
CHMP4A-211ENST00000609024 IFIT3O14879 490 aaKnown RBP19.99■□□□□ 0.79
CHMP4A-211ENST00000609024 LINC01565O15544 149 aa19.99■□□□□ 0.79
CHMP4A-211ENST00000609024 TCF7P36402 384 aaPredicted RBP19.99■□□□□ 0.79
CHMP4A-211ENST00000609024 LPIN1Q14693 890 aa19.99■□□□□ 0.79
CHMP4A-211ENST00000609024 NAALADL2Q58DX5 795 aa19.99■□□□□ 0.79
CHMP4A-211ENST00000609024 XRRA1Q6P2D8 792 aa19.99■□□□□ 0.79
CHMP4A-211ENST00000609024 TSHZ1Q6ZSZ6 1077 aa19.99■□□□□ 0.79
CHMP4A-211ENST00000609024 P2RX5Q93086 422 aa19.99■□□□□ 0.79
CHMP4A-211ENST00000609024 EHMT1Q9H9B1 1298 aa19.99■□□□□ 0.79
CHMP4A-211ENST00000609024 ERAP1Q9NZ08 941 aa19.99■□□□□ 0.79
CHMP4A-211ENST00000609024 SUPT16HQ9Y5B9 1047 aaKnown RBP19.99■□□□□ 0.79
CHMP4A-211ENST00000609024 MYO7AQ13402 2215 aa19.99■□□□□ 0.79
CHMP4A-211ENST00000609024 TMEM221A6NGB7 291 aa19.98■□□□□ 0.79
CHMP4A-211ENST00000609024 M0R296 226 aa19.98■□□□□ 0.79
CHMP4A-211ENST00000609024 DGKIO75912 1065 aa19.98■□□□□ 0.79
CHMP4A-211ENST00000609024 STAG3L1P0CL83 205 aa19.98■□□□□ 0.79
CHMP4A-211ENST00000609024 MARK3P27448 753 aa19.98■□□□□ 0.79
CHMP4A-211ENST00000609024 RRP1P56182 461 aaKnown RBP19.98■□□□□ 0.79
CHMP4A-211ENST00000609024 ADAM17P78536 824 aa19.98■□□□□ 0.79
CHMP4A-211ENST00000609024 SEC23AQ15436 765 aa19.98■□□□□ 0.79
CHMP4A-211ENST00000609024 IER5Q5VY09 327 aa19.98■□□□□ 0.79
CHMP4A-211ENST00000609024 RUFY4Q6ZNE9 571 aa19.98■□□□□ 0.79
CHMP4A-211ENST00000609024 TRIM67Q6ZTA4 783 aa19.98■□□□□ 0.79
CHMP4A-211ENST00000609024 RALYLQ86SE5 291 aaKnown RBP19.98■□□□□ 0.79
CHMP4A-211ENST00000609024 CMTR2Q8IYT2 770 aaKnown RBP19.98■□□□□ 0.79
CHMP4A-211ENST00000609024 DNAJB3Q8WWF6 145 aa19.98■□□□□ 0.79
CHMP4A-211ENST00000609024 TNPO1Q92973 898 aaKnown RBP19.98■□□□□ 0.79
CHMP4A-211ENST00000609024 CDHR1Q96JP9 859 aa19.98■□□□□ 0.79
CHMP4A-211ENST00000609024 FTHL17Q9BXU8 183 aa19.98■□□□□ 0.79
CHMP4A-211ENST00000609024 RWDD1Q9H446 243 aaPredicted RBP19.98■□□□□ 0.79
CHMP4A-211ENST00000609024 CDY2AQ9Y6F7 541 aa19.98■□□□□ 0.79
CHMP4A-211ENST00000609024 IGBP1P78318 339 aa19.97■□□□□ 0.79
CHMP4A-211ENST00000609024 WTAPQ15007 396 aa19.97■□□□□ 0.79
CHMP4A-211ENST00000609024 GRIK4Q16099 956 aa19.97■□□□□ 0.79
CHMP4A-211ENST00000609024 PCNX4Q63HM2 1172 aa19.97■□□□□ 0.79
CHMP4A-211ENST00000609024 CYB5R4Q7L1T6 521 aa19.97■□□□□ 0.79
CHMP4A-211ENST00000609024 BMP8AQ7Z5Y6 402 aa19.97■□□□□ 0.79
CHMP4A-211ENST00000609024 CATIPQ7Z7H3 387 aa19.97■□□□□ 0.79
CHMP4A-211ENST00000609024 MICAL1Q8TDZ2 1067 aa19.97■□□□□ 0.79
CHMP4A-211ENST00000609024 ZNF689Q96CS4 500 aaPredicted RBP19.97■□□□□ 0.79
CHMP4A-211ENST00000609024 SEC63Q9UGP8 760 aaKnown RBP19.97■□□□□ 0.79
CHMP4A-211ENST00000609024 LRFN2Q9ULH4 789 aa19.97■□□□□ 0.79
CHMP4A-211ENST00000609024 FRMPD4Q14CM0 1322 aa19.97■□□□□ 0.79
CHMP4A-211ENST00000609024 NRIP1P48552 1158 aa19.96■□□□□ 0.79
CHMP4A-211ENST00000609024 SEMA3FQ13275 785 aa19.96■□□□□ 0.79
CHMP4A-211ENST00000609024 PAN2Q504Q3 1202 aaKnown RBP19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms