RNA–Protein interactions for RNA: ENST00000608263.5

CTCFL-216, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 4,040 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-216ENST00000608263 ALKBH5Q6P6C2 394 aaKnown RBP11.33□□□□□ -0.6
CTCFL-216ENST00000608263 PHLDB2Q86SQ0 1253 aa11.33□□□□□ -0.6
CTCFL-216ENST00000608263 CCDC105Q8IYK2 499 aa11.33□□□□□ -0.6
CTCFL-216ENST00000608263 PIGOQ8TEQ8 1089 aa11.33□□□□□ -0.6
CTCFL-216ENST00000608263 TSKSQ9UJT2 592 aa11.33□□□□□ -0.6
CTCFL-216ENST00000608263 PTPN22Q9Y2R2 807 aa11.33□□□□□ -0.6
CTCFL-216ENST00000608263 A0A1W2PRG0 241 aa11.33□□□□□ -0.6
CTCFL-216ENST00000608263 CALUO43852 315 aaPredicted RBP11.33□□□□□ -0.6
CTCFL-216ENST00000608263 ECE2O60344 883 aa11.33□□□□□ -0.6
CTCFL-216ENST00000608263 ACTN1P12814 892 aa11.33□□□□□ -0.6
CTCFL-216ENST00000608263 NR1D1P20393 614 aa11.33□□□□□ -0.6
CTCFL-216ENST00000608263 CARSP49589 748 aaKnown RBP11.33□□□□□ -0.6
CTCFL-216ENST00000608263 PLTPP55058 493 aa11.33□□□□□ -0.6
CTCFL-216ENST00000608263 PDXDC2PQ6P474 469 aa11.33□□□□□ -0.6
CTCFL-216ENST00000608263 RUFY4Q6ZNE9 571 aa11.33□□□□□ -0.6
CTCFL-216ENST00000608263 UNC13DQ70J99 1090 aa11.33□□□□□ -0.6
CTCFL-216ENST00000608263 OR2W6PQ8NHA6 318 aa11.33□□□□□ -0.6
CTCFL-216ENST00000608263 MED15Q96RN5 788 aa11.33□□□□□ -0.6
CTCFL-216ENST00000608263 BEGAINQ9BUH8 593 aa11.33□□□□□ -0.6
CTCFL-216ENST00000608263 RASAL2Q9UJF2 1139 aa11.33□□□□□ -0.6
CTCFL-216ENST00000608263 PIK3C2AO00443 1686 aa11.33□□□□□ -0.6
CTCFL-216ENST00000608263 A0A1W2PQC6 194 aa11.32□□□□□ -0.6
CTCFL-216ENST00000608263 NTSR2O95665 410 aa11.32□□□□□ -0.6
CTCFL-216ENST00000608263 CCDC172P0C7W6 258 aa11.32□□□□□ -0.6
CTCFL-216ENST00000608263 RCAN1P53805 252 aa11.32□□□□□ -0.6
CTCFL-216ENST00000608263 PLCB3Q01970 1234 aa11.32□□□□□ -0.6
CTCFL-216ENST00000608263 TRAF1Q13077 416 aa11.32□□□□□ -0.6
CTCFL-216ENST00000608263 GRM4Q14833 912 aa11.32□□□□□ -0.6
CTCFL-216ENST00000608263 E2F5Q15329 346 aa11.32□□□□□ -0.6
CTCFL-216ENST00000608263 BARGINQ6ZT62 677 aa11.32□□□□□ -0.6
CTCFL-216ENST00000608263 DPH6Q7L8W6 267 aa11.32□□□□□ -0.6
CTCFL-216ENST00000608263 DDX42Q86XP3 938 aaKnown RBP eCLIP11.32□□□□□ -0.6
CTCFL-216ENST00000608263 DNAJC17Q9NVM6 304 aaKnown RBP11.32□□□□□ -0.6
CTCFL-216ENST00000608263 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.32□□□□□ -0.6
CTCFL-216ENST00000608263 POTEFA5A3E0 1075 aa11.32□□□□□ -0.6
CTCFL-216ENST00000608263 ZSCAN5CA6NGD5 496 aaPredicted RBP11.32□□□□□ -0.6
CTCFL-216ENST00000608263 POTEIP0CG38 1075 aa11.32□□□□□ -0.6
CTCFL-216ENST00000608263 KRT5P13647 590 aa11.32□□□□□ -0.6
CTCFL-216ENST00000608263 MAGEA9P43362 315 aa11.32□□□□□ -0.6
CTCFL-216ENST00000608263 DHX9Q08211 1270 aaKnown RBP11.32□□□□□ -0.6
CTCFL-216ENST00000608263 POTEGQ6S5H5 508 aa11.32□□□□□ -0.6
CTCFL-216ENST00000608263 POTEEQ6S8J3 1075 aa11.32□□□□□ -0.6
CTCFL-216ENST00000608263 EEPD1Q7L9B9 569 aa11.32□□□□□ -0.6
CTCFL-216ENST00000608263 GIMAP8Q8ND71 665 aaPredicted RBP11.32□□□□□ -0.6
CTCFL-216ENST00000608263 BHMT2Q9H2M3 363 aa11.32□□□□□ -0.6
CTCFL-216ENST00000608263 TMEM51Q9NW97 253 aa11.32□□□□□ -0.6
CTCFL-216ENST00000608263 PLAAQ9Y263 795 aa11.32□□□□□ -0.6
CTCFL-216ENST00000608263 ITIH6Q6UXX5 1313 aa11.32□□□□□ -0.6
CTCFL-216ENST00000608263 CCDC169A6NNP5 214 aa11.32□□□□□ -0.6
CTCFL-216ENST00000608263 USP17L10C9JJH3 530 aa11.32□□□□□ -0.6
CTCFL-216ENST00000608263 ORC4O43929 436 aa11.32□□□□□ -0.6
CTCFL-216ENST00000608263 RHOBTB3O94955 611 aa11.32□□□□□ -0.6
CTCFL-216ENST00000608263 CALCOCO2Q13137 446 aa11.32□□□□□ -0.6
CTCFL-216ENST00000608263 FBXW10Q5XX13 1052 aa11.32□□□□□ -0.6
CTCFL-216ENST00000608263 GSTA5Q7RTV2 222 aa11.32□□□□□ -0.6
CTCFL-216ENST00000608263 CCDC127Q96BQ5 260 aa11.32□□□□□ -0.6
CTCFL-216ENST00000608263 PCIF1Q9H4Z3 704 aa11.32□□□□□ -0.6
CTCFL-216ENST00000608263 ASIC3Q9UHC3 531 aa11.32□□□□□ -0.6
CTCFL-216ENST00000608263 A0A087WUV0 522 aaPredicted RBP11.32□□□□□ -0.6
CTCFL-216ENST00000608263 COASYQ13057 564 aa11.32□□□□□ -0.6
CTCFL-216ENST00000608263 ZNF211Q13398 564 aaPredicted RBP11.32□□□□□ -0.6
CTCFL-216ENST00000608263 CAPN12Q6ZSI9 719 aa11.32□□□□□ -0.6
CTCFL-216ENST00000608263 TADA2BQ86TJ2 420 aa11.32□□□□□ -0.6
CTCFL-216ENST00000608263 COL23A1Q86Y22 540 aaPredicted RBP11.32□□□□□ -0.6
CTCFL-216ENST00000608263 ANKS4BQ8N8V4 417 aa11.32□□□□□ -0.6
CTCFL-216ENST00000608263 MPHOSPH6Q99547 160 aaKnown RBP11.32□□□□□ -0.6
CTCFL-216ENST00000608263 MTA3Q9BTC8 594 aa11.32□□□□□ -0.6
CTCFL-216ENST00000608263 COA1Q9GZY4 146 aa11.32□□□□□ -0.6
CTCFL-216ENST00000608263 NUCKS1Q9H1E3 243 aaKnown RBP11.32□□□□□ -0.6
CTCFL-216ENST00000608263 SAMD15Q9P1V8 674 aa11.32□□□□□ -0.6
CTCFL-216ENST00000608263 MTRF1LQ9UGC7 380 aaKnown RBP11.32□□□□□ -0.6
CTCFL-216ENST00000608263 FRMD3A2A2Y4 597 aa11.31□□□□□ -0.6
CTCFL-216ENST00000608263 ARHGEF35A5YM69 484 aa11.31□□□□□ -0.6
CTCFL-216ENST00000608263 ZBED4O75132 1171 aa11.31□□□□□ -0.6
CTCFL-216ENST00000608263 CTNNA2P26232 953 aa11.31□□□□□ -0.6
CTCFL-216ENST00000608263 SEC24CP53992 1094 aa11.31□□□□□ -0.6
CTCFL-216ENST00000608263 KCNH2Q12809 1159 aa11.31□□□□□ -0.6
CTCFL-216ENST00000608263 MESDQ14696 234 aa11.31□□□□□ -0.6
CTCFL-216ENST00000608263 SLC15A2Q16348 729 aa11.31□□□□□ -0.6
CTCFL-216ENST00000608263 LRRC31Q6UY01 552 aa11.31□□□□□ -0.6
CTCFL-216ENST00000608263 NCAPG2Q86XI2 1143 aa11.31□□□□□ -0.6
CTCFL-216ENST00000608263 CCSER1Q9C0I3 900 aa11.31□□□□□ -0.6
CTCFL-216ENST00000608263 STK17AQ9UEE5 414 aa11.31□□□□□ -0.6
CTCFL-216ENST00000608263 ANO9A1A5B4 782 aa11.31□□□□□ -0.6
CTCFL-216ENST00000608263 NOP56O00567 594 aaKnown RBP11.31□□□□□ -0.6
CTCFL-216ENST00000608263 SERPING1P05155 500 aa11.31□□□□□ -0.6
CTCFL-216ENST00000608263 CNGA1P29973 690 aa11.31□□□□□ -0.6
CTCFL-216ENST00000608263 ARHGAP25P42331 645 aa11.31□□□□□ -0.6
CTCFL-216ENST00000608263 NT5DC1Q5TFE4 455 aa11.31□□□□□ -0.6
CTCFL-216ENST00000608263 TMED8Q6PL24 325 aaPredicted RBP11.31□□□□□ -0.6
CTCFL-216ENST00000608263 TRAPPC11Q7Z392 1133 aa11.31□□□□□ -0.6
CTCFL-216ENST00000608263 EFCAB13Q8IY85 973 aa11.31□□□□□ -0.6
CTCFL-216ENST00000608263 RTKN2Q8IZC4 609 aa11.31□□□□□ -0.6
CTCFL-216ENST00000608263 ANKRD35Q8N283 1001 aa11.31□□□□□ -0.6
CTCFL-216ENST00000608263 GCNT4Q9P109 453 aa11.31□□□□□ -0.6
CTCFL-216ENST00000608263 ABT1Q9ULW3 272 aaKnown RBP11.31□□□□□ -0.6
CTCFL-216ENST00000608263 FANCGO15287 622 aa11.31□□□□□ -0.6
CTCFL-216ENST00000608263 GH2P01242 217 aa11.31□□□□□ -0.6
CTCFL-216ENST00000608263 MYL1P05976 194 aa11.31□□□□□ -0.6
CTCFL-216ENST00000608263 KCNB1Q14721 858 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms