RNA–Protein interactions for RNA: ENST00000607448.5

LINC01001-203, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 1,569 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-203ENST00000607448 POLR2MP0CAP2 368 aa11.93□□□□□ -0.5
LINC01001-203ENST00000607448 CALM1P0DP23 149 aa11.93□□□□□ -0.5
LINC01001-203ENST00000607448 CALM2P0DP24 149 aa11.93□□□□□ -0.5
LINC01001-203ENST00000607448 CALM3P0DP25 149 aa11.93□□□□□ -0.5
LINC01001-203ENST00000607448 SMARCA1P28370 1054 aa11.93□□□□□ -0.5
LINC01001-203ENST00000607448 CDC27P30260 824 aa11.93□□□□□ -0.5
LINC01001-203ENST00000607448 CPT1AP50416 773 aa11.93□□□□□ -0.5
LINC01001-203ENST00000607448 SP2Q02086 613 aa11.93□□□□□ -0.5
LINC01001-203ENST00000607448 FUT2Q10981 343 aa11.93□□□□□ -0.5
LINC01001-203ENST00000607448 SNW1Q13573 536 aaKnown RBP11.93□□□□□ -0.5
LINC01001-203ENST00000607448 IQCB1Q15051 598 aa11.93□□□□□ -0.5
LINC01001-203ENST00000607448 STK38Q15208 465 aa11.93□□□□□ -0.5
LINC01001-203ENST00000607448 LRIT3Q3SXY7 679 aa11.93□□□□□ -0.5
LINC01001-203ENST00000607448 VSIG10LQ86VR7 867 aa11.93□□□□□ -0.5
LINC01001-203ENST00000607448 DRC7Q8IY82 874 aa11.93□□□□□ -0.5
LINC01001-203ENST00000607448 CEP57L1Q8IYX8 460 aa11.93□□□□□ -0.5
LINC01001-203ENST00000607448 SPC24Q8NBT2 197 aa11.93□□□□□ -0.5
LINC01001-203ENST00000607448 PPP1R12CQ9BZL4 782 aa11.93□□□□□ -0.5
LINC01001-203ENST00000607448 TRPV6Q9H1D0 765 aa11.93□□□□□ -0.5
LINC01001-203ENST00000607448 GOLPH3LQ9H4A5 285 aa11.93□□□□□ -0.5
LINC01001-203ENST00000607448 BCAS3Q9H6U6 928 aa11.93□□□□□ -0.5
LINC01001-203ENST00000607448 FAM217BQ9NTX9 383 aaPredicted RBP11.93□□□□□ -0.5
LINC01001-203ENST00000607448 MAP3K20Q9NYL2 800 aaKnown RBP11.93□□□□□ -0.5
LINC01001-203ENST00000607448 DDX41Q9UJV9 622 aaKnown RBP11.93□□□□□ -0.5
LINC01001-203ENST00000607448 FRMPD4Q14CM0 1322 aa11.93□□□□□ -0.5
LINC01001-203ENST00000607448 B4DLN1 442 aa11.92□□□□□ -0.5
LINC01001-203ENST00000607448 ZEB2O60315 1214 aa11.92□□□□□ -0.5
LINC01001-203ENST00000607448 EIF3JO75822 258 aaKnown RBP11.92□□□□□ -0.5
LINC01001-203ENST00000607448 CABYRO75952 493 aa11.92□□□□□ -0.5
LINC01001-203ENST00000607448 TIMP1P01033 207 aa11.92□□□□□ -0.5
LINC01001-203ENST00000607448 MMP3P08254 477 aa11.92□□□□□ -0.5
LINC01001-203ENST00000607448 MRPL12P52815 198 aaKnown RBP11.92□□□□□ -0.5
LINC01001-203ENST00000607448 FOSBP53539 338 aa11.92□□□□□ -0.5
LINC01001-203ENST00000607448 MRPS9P82933 396 aaKnown RBP11.92□□□□□ -0.5
LINC01001-203ENST00000607448 CEBPZQ03701 1054 aaKnown RBP11.92□□□□□ -0.5
LINC01001-203ENST00000607448 DHX8Q14562 1220 aaKnown RBP11.92□□□□□ -0.5
LINC01001-203ENST00000607448 SF3A1Q15459 793 aaKnown RBP11.92□□□□□ -0.5
LINC01001-203ENST00000607448 TYW1BQ6NUM6 668 aa11.92□□□□□ -0.5
LINC01001-203ENST00000607448 SYNE3Q6ZMZ3 975 aa11.92□□□□□ -0.5
LINC01001-203ENST00000607448 FMR1NBQ8N0W7 255 aaPredicted RBP11.92□□□□□ -0.5
LINC01001-203ENST00000607448 LINC00301Q8NCQ3 95 aa11.92□□□□□ -0.5
LINC01001-203ENST00000607448 AFG1LQ8WV93 481 aa11.92□□□□□ -0.5
LINC01001-203ENST00000607448 LZTS2Q9BRK4 669 aa11.92□□□□□ -0.5
LINC01001-203ENST00000607448 TRMT13Q9NUP7 481 aaKnown RBP11.92□□□□□ -0.5
LINC01001-203ENST00000607448 SEC63Q9UGP8 760 aaKnown RBP11.92□□□□□ -0.5
LINC01001-203ENST00000607448 PCDHA7Q9UN72 937 aa11.92□□□□□ -0.5
LINC01001-203ENST00000607448 BECN2A8MW95 431 aa11.92□□□□□ -0.5
LINC01001-203ENST00000607448 ZBTB43O43298 467 aa11.92□□□□□ -0.5
LINC01001-203ENST00000607448 GNAQP50148 359 aa11.92□□□□□ -0.5
LINC01001-203ENST00000607448 UBE2SQ16763 222 aa11.92□□□□□ -0.5
LINC01001-203ENST00000607448 MYSM1Q5VVJ2 828 aa11.92□□□□□ -0.5
LINC01001-203ENST00000607448 Q7L0L9 218 aa11.92□□□□□ -0.5
LINC01001-203ENST00000607448 CCDC186Q7Z3E2 898 aa11.92□□□□□ -0.5
LINC01001-203ENST00000607448 SAMD3Q8N6K7 520 aa11.92□□□□□ -0.5
LINC01001-203ENST00000607448 BPIFA3Q9BQP9 254 aa11.92□□□□□ -0.5
LINC01001-203ENST00000607448 PYCARDQ9ULZ3 195 aa11.92□□□□□ -0.5
LINC01001-203ENST00000607448 PTPRSQ13332 1948 aa11.91□□□□□ -0.5
LINC01001-203ENST00000607448 GOLGA8AA7E2F4 631 aa11.91□□□□□ -0.5
LINC01001-203ENST00000607448 SPTLC2O15270 562 aa11.91□□□□□ -0.5
LINC01001-203ENST00000607448 GH1P01241 217 aa11.91□□□□□ -0.5
LINC01001-203ENST00000607448 CSF2RAP15509 400 aa11.91□□□□□ -0.5
LINC01001-203ENST00000607448 UBA1P22314 1058 aaKnown RBP11.91□□□□□ -0.5
LINC01001-203ENST00000607448 CYP2C18P33260 490 aa11.91□□□□□ -0.5
LINC01001-203ENST00000607448 GUCY1B3Q02153 619 aa11.91□□□□□ -0.5
LINC01001-203ENST00000607448 FPGSQ05932 587 aa11.91□□□□□ -0.5
LINC01001-203ENST00000607448 SEMA3FQ13275 785 aa11.91□□□□□ -0.5
LINC01001-203ENST00000607448 ZRSR1Q15695 479 aaKnown RBP11.91□□□□□ -0.5
LINC01001-203ENST00000607448 RTN1Q16799 776 aa11.91□□□□□ -0.5
LINC01001-203ENST00000607448 NBPF20Q3BBV1 942 aa11.91□□□□□ -0.5
LINC01001-203ENST00000607448 WWC2Q6AWC2 1192 aa11.91□□□□□ -0.5
LINC01001-203ENST00000607448 C16orf59Q7L2K0 433 aa11.91□□□□□ -0.5
LINC01001-203ENST00000607448 UBE2Q2Q8WVN8 375 aa11.91□□□□□ -0.5
LINC01001-203ENST00000607448 KAT2BQ92831 832 aa11.91□□□□□ -0.5
LINC01001-203ENST00000607448 MTG1Q9BT17 334 aaPredicted RBP11.91□□□□□ -0.5
LINC01001-203ENST00000607448 TELO2Q9Y4R8 837 aa11.91□□□□□ -0.5
LINC01001-203ENST00000607448 STK36Q9NRP7 1315 aa11.9□□□□□ -0.5
LINC01001-203ENST00000607448 PIK3CDO00329 1044 aa11.9□□□□□ -0.5
LINC01001-203ENST00000607448 TLR3O15455 904 aaKnown RBP11.9□□□□□ -0.5
LINC01001-203ENST00000607448 ZNF286BP0CG31 522 aa11.9□□□□□ -0.5
LINC01001-203ENST00000607448 CYP2C9P11712 490 aa11.9□□□□□ -0.5
LINC01001-203ENST00000607448 CMA1P23946 247 aa11.9□□□□□ -0.5
LINC01001-203ENST00000607448 CCND2P30279 289 aa11.9□□□□□ -0.5
LINC01001-203ENST00000607448 METAP2P50579 478 aaKnown RBP eCLIP11.9□□□□□ -0.5
LINC01001-203ENST00000607448 CHMP4BP1P59074 171 aa11.9□□□□□ -0.5
LINC01001-203ENST00000607448 TRAF1Q13077 416 aa11.9□□□□□ -0.5
LINC01001-203ENST00000607448 HSDL1Q3SXM5 330 aa11.9□□□□□ -0.5
LINC01001-203ENST00000607448 MFSD5Q6N075 450 aa11.9□□□□□ -0.5
LINC01001-203ENST00000607448 HEATR3Q7Z4Q2 680 aa11.9□□□□□ -0.5
LINC01001-203ENST00000607448 TET1Q8NFU7 2136 aa11.9□□□□□ -0.5
LINC01001-203ENST00000607448 TIGD1Q96MW7 591 aa11.9□□□□□ -0.5
LINC01001-203ENST00000607448 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.9□□□□□ -0.5
LINC01001-203ENST00000607448 SDF4Q9BRK5 362 aa11.9□□□□□ -0.5
LINC01001-203ENST00000607448 FTOQ9C0B1 505 aaKnown RBP eCLIP11.9□□□□□ -0.5
LINC01001-203ENST00000607448 WNT8AQ9H1J5 351 aa11.9□□□□□ -0.5
LINC01001-203ENST00000607448 RBM28Q9NW13 759 aaKnown RBP11.9□□□□□ -0.5
LINC01001-203ENST00000607448 NID2Q14112 1375 aa11.9□□□□□ -0.5
LINC01001-203ENST00000607448 UNC80Q8N2C7 3258 aa11.9□□□□□ -0.5
LINC01001-203ENST00000607448 ADAMTS3O15072 1205 aa11.89□□□□□ -0.51
LINC01001-203ENST00000607448 PPFIA3O75145 1194 aa11.89□□□□□ -0.51
LINC01001-203ENST00000607448 PPP6R2O75170 966 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms