RNA–Protein interactions for RNA: ENST00000606273.3

HLA-F-230, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 579 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-230ENST00000606273 NDUFB10O96000 172 aa14.38□□□□□ -0.11
HLA-F-230ENST00000606273 GSPT1P15170 499 aaKnown RBP14.38□□□□□ -0.11
HLA-F-230ENST00000606273 DEFB103AP81534 67 aa14.38□□□□□ -0.11
HLA-F-230ENST00000606273 TCF15Q12870 199 aa14.38□□□□□ -0.11
HLA-F-230ENST00000606273 BFSP2Q13515 415 aa14.38□□□□□ -0.11
HLA-F-230ENST00000606273 HERC4Q5GLZ8 1057 aaPredicted RBP14.38□□□□□ -0.11
HLA-F-230ENST00000606273 FAM47CQ5HY64 1035 aa14.38□□□□□ -0.11
HLA-F-230ENST00000606273 EEPD1Q7L9B9 569 aa14.38□□□□□ -0.11
HLA-F-230ENST00000606273 PRRX2Q99811 253 aa14.38□□□□□ -0.11
HLA-F-230ENST00000606273 ATP8A2Q9NTI2 1148 aa14.38□□□□□ -0.11
HLA-F-230ENST00000606273 FAM50BQ9Y247 325 aa14.38□□□□□ -0.11
HLA-F-230ENST00000606273 MYH7P12883 1935 aa14.37□□□□□ -0.11
HLA-F-230ENST00000606273 CDC14CA4D256 554 aa14.37□□□□□ -0.11
HLA-F-230ENST00000606273 ERICH6BQ5W0A0 696 aa14.37□□□□□ -0.11
HLA-F-230ENST00000606273 KIAA1211Q6ZU35 1233 aa14.37□□□□□ -0.11
HLA-F-230ENST00000606273 PPP1R13LQ8WUF5 828 aa14.37□□□□□ -0.11
HLA-F-230ENST00000606273 EDAQ92838 391 aa14.37□□□□□ -0.11
HLA-F-230ENST00000606273 PABPC5Q96DU9 382 aaKnown RBP14.37□□□□□ -0.11
HLA-F-230ENST00000606273 MRPL38Q96DV4 380 aaKnown RBP14.37□□□□□ -0.11
HLA-F-230ENST00000606273 MTG1Q9BT17 334 aaPredicted RBP14.37□□□□□ -0.11
HLA-F-230ENST00000606273 PUS7LQ9H0K6 701 aaKnown RBP14.37□□□□□ -0.11
HLA-F-230ENST00000606273 ARMT1Q9H993 441 aa14.37□□□□□ -0.11
HLA-F-230ENST00000606273 A1CFQ9NQ94 594 aaKnown RBP14.37□□□□□ -0.11
HLA-F-230ENST00000606273 HOMER2Q9NSB8 354 aa14.37□□□□□ -0.11
HLA-F-230ENST00000606273 MUTYHQ9UIF7 546 aa14.37□□□□□ -0.11
HLA-F-230ENST00000606273 MYL3P08590 195 aa14.36□□□□□ -0.11
HLA-F-230ENST00000606273 COL19A1Q14993 1142 aa14.36□□□□□ -0.11
HLA-F-230ENST00000606273 UBE3CQ15386 1083 aa14.36□□□□□ -0.11
HLA-F-230ENST00000606273 LRRFIP1Q32MZ4 808 aaKnown RBP14.36□□□□□ -0.11
HLA-F-230ENST00000606273 DUSP28Q4G0W2 176 aa14.36□□□□□ -0.11
HLA-F-230ENST00000606273 RNFT1Q5M7Z0 435 aa14.36□□□□□ -0.11
HLA-F-230ENST00000606273 NFRKBQ6P4R8 1299 aa14.36□□□□□ -0.11
HLA-F-230ENST00000606273 FBXO16Q8IX29 292 aaPredicted RBP14.36□□□□□ -0.11
HLA-F-230ENST00000606273 OSBP2Q969R2 916 aa14.36□□□□□ -0.11
HLA-F-230ENST00000606273 SEC62Q99442 399 aaKnown RBP14.36□□□□□ -0.11
HLA-F-230ENST00000606273 C17orf80Q9BSJ5 609 aa14.36□□□□□ -0.11
HLA-F-230ENST00000606273 FSD1Q9BTV5 496 aa14.36□□□□□ -0.11
HLA-F-230ENST00000606273 ACAD9Q9H845 621 aa14.36□□□□□ -0.11
HLA-F-230ENST00000606273 NYAP2Q9P242 653 aa14.36□□□□□ -0.11
HLA-F-230ENST00000606273 CTNNA3Q9UI47 895 aa14.36□□□□□ -0.11
HLA-F-230ENST00000606273 CFAP54Q96N23 3096 aa14.35□□□□□ -0.11
HLA-F-230ENST00000606273 RNF113AO15541 343 aaKnown RBP14.35□□□□□ -0.11
HLA-F-230ENST00000606273 MBD4O95243 580 aa14.35□□□□□ -0.11
HLA-F-230ENST00000606273 PTPN11Q06124 597 aaPredicted RBP14.35□□□□□ -0.11
HLA-F-230ENST00000606273 PKN1Q16512 942 aa14.35□□□□□ -0.11
HLA-F-230ENST00000606273 TTC22Q5TAA0 569 aa14.35□□□□□ -0.11
HLA-F-230ENST00000606273 SV2AQ7L0J3 742 aa14.35□□□□□ -0.11
HLA-F-230ENST00000606273 RNF135Q8IUD6 432 aa14.35□□□□□ -0.11
HLA-F-230ENST00000606273 BANK1Q8NDB2 785 aa14.35□□□□□ -0.11
HLA-F-230ENST00000606273 PBXIP1Q96AQ6 731 aa14.35□□□□□ -0.11
HLA-F-230ENST00000606273 EVI5LQ96CN4 794 aa14.35□□□□□ -0.11
HLA-F-230ENST00000606273 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.35□□□□□ -0.11
HLA-F-230ENST00000606273 FEM1BQ9UK73 627 aa14.35□□□□□ -0.11
HLA-F-230ENST00000606273 ABHD14A-ACY1A0A1B0GW23 586 aa14.34□□□□□ -0.11
HLA-F-230ENST00000606273 M0R2C6 588 aa14.34□□□□□ -0.11
HLA-F-230ENST00000606273 CPT1AP50416 773 aa14.34□□□□□ -0.11
HLA-F-230ENST00000606273 PTPROQ16827 1216 aa14.34□□□□□ -0.11
HLA-F-230ENST00000606273 TCTN1Q2MV58 587 aa14.34□□□□□ -0.11
HLA-F-230ENST00000606273 LYSMD3Q7Z3D4 306 aa14.34□□□□□ -0.11
HLA-F-230ENST00000606273 MORC4Q8TE76 937 aa14.34□□□□□ -0.11
HLA-F-230ENST00000606273 RILPL2Q969X0 211 aa14.34□□□□□ -0.11
HLA-F-230ENST00000606273 ALG13Q9NP73 1137 aaKnown RBP14.34□□□□□ -0.11
HLA-F-230ENST00000606273 VTA1Q9NP79 307 aa14.34□□□□□ -0.11
HLA-F-230ENST00000606273 SDSP20132 328 aa14.33□□□□□ -0.12
HLA-F-230ENST00000606273 LTBRP36941 435 aa14.33□□□□□ -0.12
HLA-F-230ENST00000606273 NR1H3Q13133 447 aa14.33□□□□□ -0.12
HLA-F-230ENST00000606273 SMAD2Q15796 467 aaKnown RBP14.33□□□□□ -0.12
HLA-F-230ENST00000606273 TCEAL5Q5H9L2 206 aa14.33□□□□□ -0.12
HLA-F-230ENST00000606273 ZMYM1Q5SVZ6 1142 aa14.33□□□□□ -0.12
HLA-F-230ENST00000606273 CNKSR3Q6P9H4 555 aa14.33□□□□□ -0.12
HLA-F-230ENST00000606273 CTR9Q6PD62 1173 aa14.33□□□□□ -0.12
HLA-F-230ENST00000606273 EP400NLQ6ZTU2 488 aa14.33□□□□□ -0.12
HLA-F-230ENST00000606273 AMOTL1Q8IY63 956 aa14.33□□□□□ -0.12
HLA-F-230ENST00000606273 AFAP1L1Q8TED9 768 aa14.33□□□□□ -0.12
HLA-F-230ENST00000606273 APPBP2Q92624 585 aa14.33□□□□□ -0.12
HLA-F-230ENST00000606273 FAM227BQ96M60 508 aa14.33□□□□□ -0.12
HLA-F-230ENST00000606273 WDR11Q9BZH6 1224 aa14.33□□□□□ -0.12
HLA-F-230ENST00000606273 RNF146Q9NTX7 359 aa14.33□□□□□ -0.12
HLA-F-230ENST00000606273 FAM86C1Q9NVL1 165 aa14.33□□□□□ -0.12
HLA-F-230ENST00000606273 CLIP2Q9UDT6 1046 aa14.33□□□□□ -0.12
HLA-F-230ENST00000606273 NOD1Q9Y239 953 aa14.33□□□□□ -0.12
HLA-F-230ENST00000606273 COL4A4P53420 1690 aaPredicted RBP14.33□□□□□ -0.12
HLA-F-230ENST00000606273 ZNF318Q5VUA4 2279 aa14.32□□□□□ -0.12
HLA-F-230ENST00000606273 TMEM221A6NGB7 291 aa14.32□□□□□ -0.12
HLA-F-230ENST00000606273 M0R296 226 aa14.32□□□□□ -0.12
HLA-F-230ENST00000606273 NBNO60934 754 aa14.32□□□□□ -0.12
HLA-F-230ENST00000606273 CXCL10P02778 98 aa14.32□□□□□ -0.12
HLA-F-230ENST00000606273 TIGD5Q53EQ6 642 aa14.32□□□□□ -0.12
HLA-F-230ENST00000606273 ZSCAN25Q6NSZ9 544 aa14.32□□□□□ -0.12
HLA-F-230ENST00000606273 FAM117BQ6P1L5 589 aa14.32□□□□□ -0.12
HLA-F-230ENST00000606273 MKL1Q969V6 931 aa14.32□□□□□ -0.12
HLA-F-230ENST00000606273 TRERF1Q96PN7 1200 aa14.32□□□□□ -0.12
HLA-F-230ENST00000606273 CTAGE1Q96RT6 745 aa14.32□□□□□ -0.12
HLA-F-230ENST00000606273 INSL6Q9Y581 213 aa14.32□□□□□ -0.12
HLA-F-230ENST00000606273 SCN5AQ14524 2016 aa14.32□□□□□ -0.12
HLA-F-230ENST00000606273 A0A0D9SFI3 127 aa14.31□□□□□ -0.12
HLA-F-230ENST00000606273 RBM47A0AV96 593 aaKnown RBP14.31□□□□□ -0.12
HLA-F-230ENST00000606273 KPNA6O60684 536 aa14.31□□□□□ -0.12
HLA-F-230ENST00000606273 ZFYP08048 801 aaPredicted RBP14.31□□□□□ -0.12
HLA-F-230ENST00000606273 SELPP16109 830 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms