RNA–Protein interactions for RNA: ENST00000604967.1

TUBE1-210, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-210ENST00000604967 KIF2CQ99661 725 aa12.21□□□□□ -0.45
TUBE1-210ENST00000604967 AGO4Q9HCK5 861 aaKnown RBP12.21□□□□□ -0.45
TUBE1-210ENST00000604967 A0A0C4DFX4 3053 aa12.21□□□□□ -0.46
TUBE1-210ENST00000604967 SPTBN5Q9NRC6 3674 aaKnown RBP12.2□□□□□ -0.46
TUBE1-210ENST00000604967 CCDC196A0A1B0GTZ2 297 aa12.2□□□□□ -0.46
TUBE1-210ENST00000604967 hCG_1984214I3L0E3 225 aa12.2□□□□□ -0.46
TUBE1-210ENST00000604967 FGBP02675 491 aa12.2□□□□□ -0.46
TUBE1-210ENST00000604967 DNAJB2P25686 324 aa12.2□□□□□ -0.46
TUBE1-210ENST00000604967 TCF7P36402 384 aaPredicted RBP12.2□□□□□ -0.46
TUBE1-210ENST00000604967 MKRN4PQ13434 485 aaPredicted RBP12.2□□□□□ -0.46
TUBE1-210ENST00000604967 MARCH8Q5T0T0 291 aa12.2□□□□□ -0.46
TUBE1-210ENST00000604967 PSRC1Q6PGN9 363 aaPredicted RBP12.2□□□□□ -0.46
TUBE1-210ENST00000604967 RUFY4Q6ZNE9 571 aa12.2□□□□□ -0.46
TUBE1-210ENST00000604967 SPRED2Q7Z698 418 aa12.2□□□□□ -0.46
TUBE1-210ENST00000604967 NLRX1Q86UT6 975 aa12.2□□□□□ -0.46
TUBE1-210ENST00000604967 SERINC5Q86VE9 423 aa12.2□□□□□ -0.46
TUBE1-210ENST00000604967 ZNF713Q8N859 430 aaPredicted RBP12.2□□□□□ -0.46
TUBE1-210ENST00000604967 C7orf31Q8N865 590 aa12.2□□□□□ -0.46
TUBE1-210ENST00000604967 GJA10Q969M2 543 aa12.2□□□□□ -0.46
TUBE1-210ENST00000604967 GBF1Q92538 1859 aa12.2□□□□□ -0.46
TUBE1-210ENST00000604967 UNC80Q8N2C7 3258 aa12.19□□□□□ -0.46
TUBE1-210ENST00000604967 PFKFB2O60825 505 aa12.19□□□□□ -0.46
TUBE1-210ENST00000604967 LGR5O75473 907 aa12.19□□□□□ -0.46
TUBE1-210ENST00000604967 CXCL10P02778 98 aa12.19□□□□□ -0.46
TUBE1-210ENST00000604967 CYP3A4P08684 503 aa12.19□□□□□ -0.46
TUBE1-210ENST00000604967 FDPSP14324 419 aaKnown RBP12.19□□□□□ -0.46
TUBE1-210ENST00000604967 SELPP16109 830 aa12.19□□□□□ -0.46
TUBE1-210ENST00000604967 MARK3P27448 753 aa12.19□□□□□ -0.46
TUBE1-210ENST00000604967 AP3B2Q13367 1082 aa12.19□□□□□ -0.46
TUBE1-210ENST00000604967 GRIN2CQ14957 1233 aa12.19□□□□□ -0.46
TUBE1-210ENST00000604967 ME3Q16798 604 aa12.19□□□□□ -0.46
TUBE1-210ENST00000604967 NECAB1Q8N987 351 aa12.19□□□□□ -0.46
TUBE1-210ENST00000604967 LMBR1Q8WVP7 490 aa12.19□□□□□ -0.46
TUBE1-210ENST00000604967 CDX2Q99626 313 aaPredicted RBP12.19□□□□□ -0.46
TUBE1-210ENST00000604967 KATNAL1Q9BW62 490 aa12.19□□□□□ -0.46
TUBE1-210ENST00000604967 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.18□□□□□ -0.46
TUBE1-210ENST00000604967 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.18□□□□□ -0.46
TUBE1-210ENST00000604967 NOP56O00567 594 aaKnown RBP12.18□□□□□ -0.46
TUBE1-210ENST00000604967 ATG7O95352 703 aa12.18□□□□□ -0.46
TUBE1-210ENST00000604967 FOSP01100 380 aaPredicted RBP12.18□□□□□ -0.46
TUBE1-210ENST00000604967 ATP4AP20648 1035 aa12.18□□□□□ -0.46
TUBE1-210ENST00000604967 ANAPC15P60006 121 aa12.18□□□□□ -0.46
TUBE1-210ENST00000604967 ACTR2P61160 394 aa12.18□□□□□ -0.46
TUBE1-210ENST00000604967 PTK7Q13308 1070 aa12.18□□□□□ -0.46
TUBE1-210ENST00000604967 LRRC8DQ7L1W4 858 aa12.18□□□□□ -0.46
TUBE1-210ENST00000604967 REXO1Q8N1G1 1221 aaKnown RBP12.18□□□□□ -0.46
TUBE1-210ENST00000604967 AFAP1L1Q8TED9 768 aa12.18□□□□□ -0.46
TUBE1-210ENST00000604967 TRAPPC12Q8WVT3 735 aa12.18□□□□□ -0.46
TUBE1-210ENST00000604967 JPH1Q9HDC5 661 aaPredicted RBP12.18□□□□□ -0.46
TUBE1-210ENST00000604967 KCNJ14Q9UNX9 436 aa12.18□□□□□ -0.46
TUBE1-210ENST00000604967 SIP14410 1827 aa12.18□□□□□ -0.46
TUBE1-210ENST00000604967 TRANK1O15050 2925 aa12.17□□□□□ -0.46
TUBE1-210ENST00000604967 IGKV6D-21A0A0A0MT36 114 aa12.17□□□□□ -0.46
TUBE1-210ENST00000604967 C17orf102A2RUQ5 167 aa12.17□□□□□ -0.46
TUBE1-210ENST00000604967 FAM205CA6NFA0 338 aa12.17□□□□□ -0.46
TUBE1-210ENST00000604967 ZBTB42B2RXF5 422 aa12.17□□□□□ -0.46
TUBE1-210ENST00000604967 DDX39AO00148 427 aaKnown RBP12.17□□□□□ -0.46
TUBE1-210ENST00000604967 CIITAP33076 1130 aa12.17□□□□□ -0.46
TUBE1-210ENST00000604967 DEFB103AP81534 67 aa12.17□□□□□ -0.46
TUBE1-210ENST00000604967 BFSP2Q13515 415 aa12.17□□□□□ -0.46
TUBE1-210ENST00000604967 EARS2Q5JPH6 523 aaKnown RBP12.17□□□□□ -0.46
TUBE1-210ENST00000604967 ABHD15Q6UXT9 468 aa12.17□□□□□ -0.46
TUBE1-210ENST00000604967 PLA2G4DQ86XP0 818 aa12.17□□□□□ -0.46
TUBE1-210ENST00000604967 TEX2Q8IWB9 1127 aa12.17□□□□□ -0.46
TUBE1-210ENST00000604967 CAGE1Q8TC20 777 aa12.17□□□□□ -0.46
TUBE1-210ENST00000604967 OXER1Q8TDS5 423 aa12.17□□□□□ -0.46
TUBE1-210ENST00000604967 MYLIPQ8WY64 445 aa12.17□□□□□ -0.46
TUBE1-210ENST00000604967 SEPT1Q8WYJ6 367 aa12.17□□□□□ -0.46
TUBE1-210ENST00000604967 ATP6V0A1Q93050 837 aa12.17□□□□□ -0.46
TUBE1-210ENST00000604967 NKX2-4Q9H2Z4 354 aa12.17□□□□□ -0.46
TUBE1-210ENST00000604967 SLC9A2Q9UBY0 812 aa12.17□□□□□ -0.46
TUBE1-210ENST00000604967 NOD1Q9Y239 953 aa12.17□□□□□ -0.46
TUBE1-210ENST00000604967 STXBP5LQ9Y2K9 1186 aa12.17□□□□□ -0.46
TUBE1-210ENST00000604967 NFASCO94856 1347 aa12.16□□□□□ -0.46
TUBE1-210ENST00000604967 EMSYQ7Z589 1322 aa12.16□□□□□ -0.46
TUBE1-210ENST00000604967 MBLAC1A4D2B0 266 aaPredicted RBP12.16□□□□□ -0.46
TUBE1-210ENST00000604967 EPOPA6NHQ4 379 aa12.16□□□□□ -0.46
TUBE1-210ENST00000604967 MAFGO15525 162 aa12.16□□□□□ -0.46
TUBE1-210ENST00000604967 JAK2O60674 1132 aa12.16□□□□□ -0.46
TUBE1-210ENST00000604967 CHRNA1P02708 482 aa12.16□□□□□ -0.46
TUBE1-210ENST00000604967 RFC2P35250 354 aa12.16□□□□□ -0.46
TUBE1-210ENST00000604967 THPOP40225 353 aa12.16□□□□□ -0.46
TUBE1-210ENST00000604967 SSRP1Q08945 709 aaKnown RBP12.16□□□□□ -0.46
TUBE1-210ENST00000604967 ADGRE1Q14246 886 aa12.16□□□□□ -0.46
TUBE1-210ENST00000604967 PLCB4Q15147 1175 aa12.16□□□□□ -0.46
TUBE1-210ENST00000604967 ZNF697Q5TEC3 545 aa12.16□□□□□ -0.46
TUBE1-210ENST00000604967 NIPA1Q7RTP0 329 aa12.16□□□□□ -0.46
TUBE1-210ENST00000604967 CCDC60Q8IWA6 550 aaPredicted RBP12.16□□□□□ -0.46
TUBE1-210ENST00000604967 TIFAQ96CG3 184 aa12.16□□□□□ -0.46
TUBE1-210ENST00000604967 CDHR1Q96JP9 859 aa12.16□□□□□ -0.46
TUBE1-210ENST00000604967 C6orf50Q9HD87 102 aa12.16□□□□□ -0.46
TUBE1-210ENST00000604967 SH3GLB2Q9NR46 395 aa12.16□□□□□ -0.46
TUBE1-210ENST00000604967 LCHNA4D1U4 455 aa12.15□□□□□ -0.46
TUBE1-210ENST00000604967 WNT7AO00755 349 aa12.15□□□□□ -0.46
TUBE1-210ENST00000604967 MSH4O15457 936 aa12.15□□□□□ -0.46
TUBE1-210ENST00000604967 DEXIO95424 95 aa12.15□□□□□ -0.46
TUBE1-210ENST00000604967 TDP2O95551 362 aa12.15□□□□□ -0.46
TUBE1-210ENST00000604967 CTSHP09668 335 aa12.15□□□□□ -0.46
TUBE1-210ENST00000604967 INSRRP14616 1297 aa12.15□□□□□ -0.46
TUBE1-210ENST00000604967 ATP2A2P16615 1042 aaKnown RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms