RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 MAN1B1Q9UKM7 699 aa10.35□□□□□ -0.75
CSMD1-217ENST00000602723 NUP153P49790 1475 aaKnown RBP10.35□□□□□ -0.75
CSMD1-217ENST00000602723 ZNF658Q5TYW1 1059 aaPredicted RBP10.35□□□□□ -0.75
CSMD1-217ENST00000602723 RYBPQ8N488 228 aaPredicted RBP10.35□□□□□ -0.75
CSMD1-217ENST00000602723 FAM193BQ96PV7 902 aaPredicted RBP10.35□□□□□ -0.75
CSMD1-217ENST00000602723 GOLGA8HP0CJ92 632 aa10.34□□□□□ -0.75
CSMD1-217ENST00000602723 FKBP3Q00688 224 aaKnown RBP10.34□□□□□ -0.75
CSMD1-217ENST00000602723 YWHAHQ04917 246 aaPredicted RBP10.34□□□□□ -0.75
CSMD1-217ENST00000602723 CENPUQ71F23 418 aa10.34□□□□□ -0.75
CSMD1-217ENST00000602723 PDIK1LQ8N165 341 aa10.34□□□□□ -0.75
CSMD1-217ENST00000602723 CHAMP1Q96JM3 812 aa10.34□□□□□ -0.75
CSMD1-217ENST00000602723 AP1M1Q9BXS5 423 aa10.34□□□□□ -0.75
CSMD1-217ENST00000602723 TMEM60Q9H2L4 133 aa10.34□□□□□ -0.75
CSMD1-217ENST00000602723 MAGED2Q9UNF1 606 aaPredicted RBP10.34□□□□□ -0.75
CSMD1-217ENST00000602723 NOVA2Q9UNW9 492 aaKnown RBP10.34□□□□□ -0.75
CSMD1-217ENST00000602723 PRPSAP2O60256 369 aa10.34□□□□□ -0.75
CSMD1-217ENST00000602723 THOC5Q13769 683 aaKnown RBP10.34□□□□□ -0.75
CSMD1-217ENST00000602723 SPARCL1Q14515 664 aa10.34□□□□□ -0.75
CSMD1-217ENST00000602723 FAM47CQ5HY64 1035 aa10.34□□□□□ -0.75
CSMD1-217ENST00000602723 SUPT20HQ8NEM7 779 aa10.34□□□□□ -0.75
CSMD1-217ENST00000602723 SPDYE1Q8NFV5 336 aaPredicted RBP10.34□□□□□ -0.75
CSMD1-217ENST00000602723 PYROXD1Q8WU10 500 aa10.34□□□□□ -0.75
CSMD1-217ENST00000602723 RPS6KC1Q96S38 1066 aa10.34□□□□□ -0.75
CSMD1-217ENST00000602723 PPARGC1AQ9UBK2 798 aaKnown RBP10.34□□□□□ -0.75
CSMD1-217ENST00000602723 ASXL2Q76L83 1435 aa10.34□□□□□ -0.75
CSMD1-217ENST00000602723 GYG2O15488 501 aa10.34□□□□□ -0.75
CSMD1-217ENST00000602723 DDIT3P35638 169 aa10.34□□□□□ -0.75
CSMD1-217ENST00000602723 PABPC4Q13310 644 aaKnown RBP eCLIP10.34□□□□□ -0.75
CSMD1-217ENST00000602723 CERKLQ49MI3 558 aaPredicted RBP10.34□□□□□ -0.75
CSMD1-217ENST00000602723 ATP6V0A1Q93050 837 aa10.34□□□□□ -0.75
CSMD1-217ENST00000602723 NCLNQ969V3 563 aa10.34□□□□□ -0.75
CSMD1-217ENST00000602723 LSG1Q9H089 658 aaKnown RBP10.34□□□□□ -0.75
CSMD1-217ENST00000602723 PDE6BP35913 854 aa10.34□□□□□ -0.75
CSMD1-217ENST00000602723 PRKG1Q13976 671 aa10.34□□□□□ -0.75
CSMD1-217ENST00000602723 GLE1Q53GS7 698 aaKnown RBP10.34□□□□□ -0.75
CSMD1-217ENST00000602723 TRIM67Q6ZTA4 783 aa10.34□□□□□ -0.75
CSMD1-217ENST00000602723 NDUFA10O95299 355 aa10.34□□□□□ -0.75
CSMD1-217ENST00000602723 NR1H3Q13133 447 aa10.34□□□□□ -0.75
CSMD1-217ENST00000602723 GRAMD1CQ8IYS0 662 aa10.34□□□□□ -0.75
CSMD1-217ENST00000602723 RNF217Q8TC41 542 aa10.34□□□□□ -0.75
CSMD1-217ENST00000602723 SSH3Q8TE77 659 aa10.34□□□□□ -0.75
CSMD1-217ENST00000602723 GIPC2Q8TF65 315 aa10.34□□□□□ -0.75
CSMD1-217ENST00000602723 MID2Q9UJV3 735 aa10.34□□□□□ -0.75
CSMD1-217ENST00000602723 CAPN11Q9UMQ6 739 aa10.34□□□□□ -0.75
CSMD1-217ENST00000602723 BCAMP50895 628 aa10.34□□□□□ -0.75
CSMD1-217ENST00000602723 ICE2Q659A1 982 aa10.34□□□□□ -0.75
CSMD1-217ENST00000602723 FGGP02679 453 aa10.34□□□□□ -0.75
CSMD1-217ENST00000602723 ZBTB41Q5SVQ8 909 aa10.34□□□□□ -0.75
CSMD1-217ENST00000602723 C1orf146Q5VVC0 180 aa10.34□□□□□ -0.75
CSMD1-217ENST00000602723 HIPK4Q8NE63 616 aa10.34□□□□□ -0.75
CSMD1-217ENST00000602723 PAGR1Q9BTK6 254 aa10.34□□□□□ -0.75
CSMD1-217ENST00000602723 UBE2TQ9NPD8 197 aaPredicted RBP10.34□□□□□ -0.75
CSMD1-217ENST00000602723 PCDHA4Q9UN74 947 aa10.34□□□□□ -0.75
CSMD1-217ENST00000602723 PTPN21Q16825 1174 aa10.34□□□□□ -0.75
CSMD1-217ENST00000602723 KIF19Q2TAC6 998 aa10.34□□□□□ -0.75
CSMD1-217ENST00000602723 BBS9Q3SYG4 887 aa10.34□□□□□ -0.75
CSMD1-217ENST00000602723 TRIML2Q8N7C3 387 aa10.34□□□□□ -0.75
CSMD1-217ENST00000602723 ACCSQ96QU6 501 aa10.34□□□□□ -0.75
CSMD1-217ENST00000602723 G3BP2Q9UN86 482 aaKnown RBP10.34□□□□□ -0.75
CSMD1-217ENST00000602723 H0Y3Z8 333 aa10.34□□□□□ -0.75
CSMD1-217ENST00000602723 ARHGEF9O43307 516 aa10.34□□□□□ -0.75
CSMD1-217ENST00000602723 FMNL1O95466 1100 aaPredicted RBP10.34□□□□□ -0.75
CSMD1-217ENST00000602723 A1BGP04217 495 aa10.34□□□□□ -0.75
CSMD1-217ENST00000602723 ARL4AP40617 200 aa10.34□□□□□ -0.75
CSMD1-217ENST00000602723 TFAMQ00059 246 aaKnown RBP10.34□□□□□ -0.75
CSMD1-217ENST00000602723 TAF1BQ53T94 588 aaPredicted RBP10.34□□□□□ -0.75
CSMD1-217ENST00000602723 PI4K2BQ8TCG2 481 aa10.34□□□□□ -0.75
CSMD1-217ENST00000602723 SPTLC3Q9NUV7 552 aa10.34□□□□□ -0.75
CSMD1-217ENST00000602723 IPO5O00410 1097 aaKnown RBP10.33□□□□□ -0.76
CSMD1-217ENST00000602723 FOSP01100 380 aaPredicted RBP10.33□□□□□ -0.76
CSMD1-217ENST00000602723 MLH3Q9UHC1 1453 aa10.33□□□□□ -0.76
CSMD1-217ENST00000602723 M0R2C6 588 aa10.33□□□□□ -0.76
CSMD1-217ENST00000602723 OCA2Q04671 838 aa10.33□□□□□ -0.76
CSMD1-217ENST00000602723 KIF17Q9P2E2 1029 aa10.33□□□□□ -0.76
CSMD1-217ENST00000602723 A0A087WWV3 80 aa10.33□□□□□ -0.76
CSMD1-217ENST00000602723 THAP9Q9H5L6 903 aa10.33□□□□□ -0.76
CSMD1-217ENST00000602723 SUFUQ9UMX1 484 aa10.33□□□□□ -0.76
CSMD1-217ENST00000602723 TBC1D1Q86TI0 1168 aaPredicted RBP10.33□□□□□ -0.76
CSMD1-217ENST00000602723 ENOX1Q8TC92 643 aaKnown RBP10.33□□□□□ -0.76
CSMD1-217ENST00000602723 FAM149B1Q96BN6 582 aa10.33□□□□□ -0.76
CSMD1-217ENST00000602723 ZFP69BQ9UJL9 534 aa10.33□□□□□ -0.76
CSMD1-217ENST00000602723 CSADQ9Y600 493 aa10.33□□□□□ -0.76
CSMD1-217ENST00000602723 SYNGAP1Q96PV0 1343 aa10.33□□□□□ -0.76
CSMD1-217ENST00000602723 ZBED6P86452 979 aa10.33□□□□□ -0.76
CSMD1-217ENST00000602723 ASPRV1Q53RT3 343 aa10.33□□□□□ -0.76
CSMD1-217ENST00000602723 LAMC1P11047 1609 aa10.33□□□□□ -0.76
CSMD1-217ENST00000602723 TMPRSS15P98073 1019 aa10.33□□□□□ -0.76
CSMD1-217ENST00000602723 MDM2Q00987 491 aaPredicted RBP10.33□□□□□ -0.76
CSMD1-217ENST00000602723 RMDN2Q96LZ7 410 aa10.33□□□□□ -0.76
CSMD1-217ENST00000602723 ZBTB18Q99592 522 aa10.33□□□□□ -0.76
CSMD1-217ENST00000602723 TOM1O60784 492 aa10.33□□□□□ -0.76
CSMD1-217ENST00000602723 ZBED1O96006 694 aa10.33□□□□□ -0.76
CSMD1-217ENST00000602723 PYGLP06737 847 aa10.33□□□□□ -0.76
CSMD1-217ENST00000602723 SYT2Q8N9I0 419 aaPredicted RBP10.33□□□□□ -0.76
CSMD1-217ENST00000602723 PITPNM3Q9BZ71 974 aa10.33□□□□□ -0.76
CSMD1-217ENST00000602723 PALMDQ9NP74 551 aa10.33□□□□□ -0.76
CSMD1-217ENST00000602723 ATP8B3O60423 1300 aa10.33□□□□□ -0.76
CSMD1-217ENST00000602723 KDM5CP41229 1560 aa10.33□□□□□ -0.76
CSMD1-217ENST00000602723 ZNF233A6NK53 670 aa10.33□□□□□ -0.76
CSMD1-217ENST00000602723 ABCB6Q9NP58 842 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms