RNA–Protein interactions for RNA: ENST00000602113.5

DDX49-213, Transcript of DEAD-box helicase 49, humanhuman

TSL 1 (best)

Gene DDX49, Length 1,691 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-213ENST00000602113 NT5C3AQ9H0P0 336 aa19.59■□□□□ 0.73
DDX49-213ENST00000602113 KBTBD4Q9NVX7 518 aa19.59■□□□□ 0.73
DDX49-213ENST00000602113 HOOK1Q9UJC3 728 aaKnown RBP19.59■□□□□ 0.73
DDX49-213ENST00000602113 A0A087WWV3 80 aa19.58■□□□□ 0.72
DDX49-213ENST00000602113 SORBS3O60504 671 aa19.58■□□□□ 0.72
DDX49-213ENST00000602113 TRPA1O75762 1119 aa19.58■□□□□ 0.72
DDX49-213ENST00000602113 ARIH2O95376 493 aa19.58■□□□□ 0.72
DDX49-213ENST00000602113 HOXC6P09630 235 aa19.58■□□□□ 0.72
DDX49-213ENST00000602113 LACTBP83111 547 aaPredicted RBP19.58■□□□□ 0.72
DDX49-213ENST00000602113 CTTNQ14247 550 aaKnown RBP19.58■□□□□ 0.72
DDX49-213ENST00000602113 ZNF746Q6NUN9 644 aaPredicted RBP19.58■□□□□ 0.72
DDX49-213ENST00000602113 RAD54LQ92698 747 aa19.58■□□□□ 0.72
DDX49-213ENST00000602113 KATNBL1Q9H079 304 aa19.58■□□□□ 0.72
DDX49-213ENST00000602113 TUFT1Q9NNX1 390 aa19.58■□□□□ 0.72
DDX49-213ENST00000602113 PDGFCQ9NRA1 345 aa19.58■□□□□ 0.72
DDX49-213ENST00000602113 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.58■□□□□ 0.72
DDX49-213ENST00000602113 SLC5A4Q9NY91 659 aa19.58■□□□□ 0.72
DDX49-213ENST00000602113 TUBE1Q9UJT0 475 aa19.58■□□□□ 0.72
DDX49-213ENST00000602113 PCDHA5Q9Y5H7 936 aa19.58■□□□□ 0.72
DDX49-213ENST00000602113 MCM3APO60318 1980 aa19.58■□□□□ 0.72
DDX49-213ENST00000602113 THSD7BQ9C0I4 1608 aa19.57■□□□□ 0.72
DDX49-213ENST00000602113 E9PMD0 336 aa19.57■□□□□ 0.72
DDX49-213ENST00000602113 TGFB3P10600 412 aa19.57■□□□□ 0.72
DDX49-213ENST00000602113 PSMC6P62333 389 aa19.57■□□□□ 0.72
DDX49-213ENST00000602113 TYRO3Q06418 890 aa19.57■□□□□ 0.72
DDX49-213ENST00000602113 DPYDQ12882 1025 aa19.57■□□□□ 0.72
DDX49-213ENST00000602113 MCM6Q14566 821 aa19.57■□□□□ 0.72
DDX49-213ENST00000602113 CCDC34Q96HJ3 373 aa19.57■□□□□ 0.72
DDX49-213ENST00000602113 TRIM47Q96LD4 638 aa19.57■□□□□ 0.72
DDX49-213ENST00000602113 TINF2Q9BSI4 451 aa19.57■□□□□ 0.72
DDX49-213ENST00000602113 MAGEF1Q9HAY2 307 aa19.57■□□□□ 0.72
DDX49-213ENST00000602113 JPH1Q9HDC5 661 aaPredicted RBP19.57■□□□□ 0.72
DDX49-213ENST00000602113 WRAP73Q9P2S5 460 aaPredicted RBP19.57■□□□□ 0.72
DDX49-213ENST00000602113 SLC9A2Q9UBY0 812 aa19.57■□□□□ 0.72
DDX49-213ENST00000602113 DDX41Q9UJV9 622 aaKnown RBP19.57■□□□□ 0.72
DDX49-213ENST00000602113 DOCK3Q8IZD9 2030 aa19.57■□□□□ 0.72
DDX49-213ENST00000602113 WDR64B1ANS9 1081 aa19.56■□□□□ 0.72
DDX49-213ENST00000602113 GTPBP6O43824 516 aaPredicted RBP19.56■□□□□ 0.72
DDX49-213ENST00000602113 PSMC4P43686 418 aa19.56■□□□□ 0.72
DDX49-213ENST00000602113 JAK3P52333 1124 aa19.56■□□□□ 0.72
DDX49-213ENST00000602113 FCGRTP55899 365 aa19.56■□□□□ 0.72
DDX49-213ENST00000602113 CAP1Q01518 475 aa19.56■□□□□ 0.72
DDX49-213ENST00000602113 CUL4BQ13620 913 aa19.56■□□□□ 0.72
DDX49-213ENST00000602113 LY6KQ17RY6 165 aa19.56■□□□□ 0.72
DDX49-213ENST00000602113 TAPT1Q6NXT6 567 aa19.56■□□□□ 0.72
DDX49-213ENST00000602113 CCDC62Q6P9F0 684 aa19.56■□□□□ 0.72
DDX49-213ENST00000602113 SASS6Q6UVJ0 657 aa19.56■□□□□ 0.72
DDX49-213ENST00000602113 CYFIP1Q7L576 1253 aa19.56■□□□□ 0.72
DDX49-213ENST00000602113 TPH2Q8IWU9 490 aa19.56■□□□□ 0.72
DDX49-213ENST00000602113 SPATA20Q8TB22 786 aa19.56■□□□□ 0.72
DDX49-213ENST00000602113 SOCS4Q8WXH5 440 aa19.56■□□□□ 0.72
DDX49-213ENST00000602113 LARP4BQ92615 738 aaKnown RBP19.56■□□□□ 0.72
DDX49-213ENST00000602113 BLZF1Q9H2G9 400 aa19.56■□□□□ 0.72
DDX49-213ENST00000602113 VTA1Q9NP79 307 aa19.56■□□□□ 0.72
DDX49-213ENST00000602113 FLRT1Q9NZU1 646 aa19.56■□□□□ 0.72
DDX49-213ENST00000602113 SYNGAP1Q96PV0 1343 aa19.56■□□□□ 0.72
DDX49-213ENST00000602113 CYP2B6P20813 491 aa19.56■□□□□ 0.72
DDX49-213ENST00000602113 SFNP31947 248 aa19.56■□□□□ 0.72
DDX49-213ENST00000602113 SARSP49591 514 aaKnown RBP19.56■□□□□ 0.72
DDX49-213ENST00000602113 DHX8Q14562 1220 aaKnown RBP19.56■□□□□ 0.72
DDX49-213ENST00000602113 GSE1Q14687 1217 aa19.56■□□□□ 0.72
DDX49-213ENST00000602113 TMEM63BQ5T3F8 832 aa19.56■□□□□ 0.72
DDX49-213ENST00000602113 KCNV1Q6PIU1 500 aa19.56■□□□□ 0.72
DDX49-213ENST00000602113 BANK1Q8NDB2 785 aa19.56■□□□□ 0.72
DDX49-213ENST00000602113 NEK9Q8TD19 979 aa19.56■□□□□ 0.72
DDX49-213ENST00000602113 TSPY26PQ9H489 355 aa19.56■□□□□ 0.72
DDX49-213ENST00000602113 TCEAL9Q9UHQ7 104 aa19.56■□□□□ 0.72
DDX49-213ENST00000602113 SAMM50Q9Y512 469 aa19.56■□□□□ 0.72
DDX49-213ENST00000602113 ZSWIM8A7E2V4 1837 aa19.55■□□□□ 0.72
DDX49-213ENST00000602113 BIN1O00499 593 aa19.55■□□□□ 0.72
DDX49-213ENST00000602113 CCDC192P0DO97 292 aa19.55■□□□□ 0.72
DDX49-213ENST00000602113 RGS2P41220 211 aa19.55■□□□□ 0.72
DDX49-213ENST00000602113 ACTR2P61160 394 aa19.55■□□□□ 0.72
DDX49-213ENST00000602113 SP4Q02446 784 aa19.55■□□□□ 0.72
DDX49-213ENST00000602113 CCL14Q16627 93 aa19.55■□□□□ 0.72
DDX49-213ENST00000602113 NT5DC1Q5TFE4 455 aa19.55■□□□□ 0.72
DDX49-213ENST00000602113 SV2BQ7L1I2 683 aa19.55■□□□□ 0.72
DDX49-213ENST00000602113 MSL3Q8N5Y2 521 aaKnown RBP19.55■□□□□ 0.72
DDX49-213ENST00000602113 RDM1Q8NG50 284 aa19.55■□□□□ 0.72
DDX49-213ENST00000602113 LXNQ9BS40 222 aa19.55■□□□□ 0.72
DDX49-213ENST00000602113 DOCK5Q9H7D0 1870 aa19.55■□□□□ 0.72
DDX49-213ENST00000602113 RBM47A0AV96 593 aaKnown RBP19.54■□□□□ 0.72
DDX49-213ENST00000602113 FARP2O94887 1054 aaPredicted RBP19.54■□□□□ 0.72
DDX49-213ENST00000602113 GGPS1O95749 300 aa19.54■□□□□ 0.72
DDX49-213ENST00000602113 P4HBP07237 508 aaKnown RBP19.54■□□□□ 0.72
DDX49-213ENST00000602113 PLA2G4BP0C869 781 aa19.54■□□□□ 0.72
DDX49-213ENST00000602113 MUTP22033 750 aa19.54■□□□□ 0.72
DDX49-213ENST00000602113 SP3Q02447 781 aa19.54■□□□□ 0.72
DDX49-213ENST00000602113 NEDD9Q14511 834 aa19.54■□□□□ 0.72
DDX49-213ENST00000602113 UGCGQ16739 394 aa19.54■□□□□ 0.72
DDX49-213ENST00000602113 SMAP1Q8IYB5 467 aaPredicted RBP19.54■□□□□ 0.72
DDX49-213ENST00000602113 GIMAP8Q8ND71 665 aaPredicted RBP19.54■□□□□ 0.72
DDX49-213ENST00000602113 SCFD2Q8WU76 684 aa19.54■□□□□ 0.72
DDX49-213ENST00000602113 SMARCE1Q969G3 411 aa19.54■□□□□ 0.72
DDX49-213ENST00000602113 APBA2Q99767 749 aa19.54■□□□□ 0.72
DDX49-213ENST00000602113 DNM3Q9UQ16 869 aa19.54■□□□□ 0.72
DDX49-213ENST00000602113 PCDHA10Q9Y5I2 948 aa19.54■□□□□ 0.72
DDX49-213ENST00000602113 MYMKA6NI61 221 aa19.53■□□□□ 0.72
DDX49-213ENST00000602113 ZBTB39O15060 712 aa19.53■□□□□ 0.72
DDX49-213ENST00000602113 IGHA2P01877 340 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms