RNA–Protein interactions for RNA: ENST00000601816.3

PNKP-216, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 682 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-216ENST00000601816 JPH1Q9HDC5 661 aaPredicted RBP29.75■■■□□ 2.35
PNKP-216ENST00000601816 SETD4Q9NVD3 440 aa29.75■■■□□ 2.35
PNKP-216ENST00000601816 TET1Q8NFU7 2136 aa29.74■■■□□ 2.35
PNKP-216ENST00000601816 GSTTP1A0A1W2PQM5 241 aa29.74■■■□□ 2.35
PNKP-216ENST00000601816 ESYT2A0FGR8 921 aa29.74■■■□□ 2.35
PNKP-216ENST00000601816 MYOGP15173 224 aa29.74■■■□□ 2.35
PNKP-216ENST00000601816 PDIA3P30101 505 aaKnown RBP29.74■■■□□ 2.35
PNKP-216ENST00000601816 PKN1Q16512 942 aa29.74■■■□□ 2.35
PNKP-216ENST00000601816 CEP55Q53EZ4 464 aa29.74■■■□□ 2.35
PNKP-216ENST00000601816 PPP2R2DQ66LE6 453 aa29.74■■■□□ 2.35
PNKP-216ENST00000601816 CYP2W1Q8TAV3 490 aa29.74■■■□□ 2.35
PNKP-216ENST00000601816 TM6SF1Q9BZW5 370 aa29.74■■■□□ 2.35
PNKP-216ENST00000601816 PRDM12Q9H4Q4 367 aa29.74■■■□□ 2.35
PNKP-216ENST00000601816 C6orf50Q9HD87 102 aa29.74■■■□□ 2.35
PNKP-216ENST00000601816 CDH23Q9H251 3354 aa29.74■■■□□ 2.35
PNKP-216ENST00000601816 ARHGAP4P98171 946 aa29.73■■■□□ 2.35
PNKP-216ENST00000601816 JAKMIP3Q5VZ66 844 aa29.73■■■□□ 2.35
PNKP-216ENST00000601816 GAS2L1Q99501 681 aaPredicted RBP29.73■■■□□ 2.35
PNKP-216ENST00000601816 SDF4Q9BRK5 362 aa29.73■■■□□ 2.35
PNKP-216ENST00000601816 RNF26Q9BY78 433 aaPredicted RBP29.73■■■□□ 2.35
PNKP-216ENST00000601816 ZMYND12Q9H0C1 365 aa29.73■■■□□ 2.35
PNKP-216ENST00000601816 EMSYQ7Z589 1322 aa29.72■■■□□ 2.35
PNKP-216ENST00000601816 RSPH10B2B2RC85 870 aa29.72■■■□□ 2.35
PNKP-216ENST00000601816 RSPH10BP0C881 870 aa29.72■■■□□ 2.35
PNKP-216ENST00000601816 IFNAR1P17181 557 aa29.72■■■□□ 2.35
PNKP-216ENST00000601816 ZNF76P36508 570 aa29.72■■■□□ 2.35
PNKP-216ENST00000601816 CCT2P78371 535 aaKnown RBP29.72■■■□□ 2.35
PNKP-216ENST00000601816 TOB2Q14106 344 aaPredicted RBP29.72■■■□□ 2.35
PNKP-216ENST00000601816 MBTPS1Q14703 1052 aa29.72■■■□□ 2.35
PNKP-216ENST00000601816 NTRK3Q16288 839 aa29.72■■■□□ 2.35
PNKP-216ENST00000601816 MCTP2Q6DN12 878 aa29.72■■■□□ 2.35
PNKP-216ENST00000601816 HERC6Q8IVU3 1022 aa29.72■■■□□ 2.35
PNKP-216ENST00000601816 LMBR1Q8WVP7 490 aa29.72■■■□□ 2.35
PNKP-216ENST00000601816 GLG1Q92896 1179 aa29.72■■■□□ 2.35
PNKP-216ENST00000601816 SLC26A6Q9BXS9 759 aa29.72■■■□□ 2.35
PNKP-216ENST00000601816 NCOA5Q9HCD5 579 aaKnown RBP29.72■■■□□ 2.35
PNKP-216ENST00000601816 ERAP1Q9NZ08 941 aa29.72■■■□□ 2.35
PNKP-216ENST00000601816 SLC9A2Q9UBY0 812 aa29.72■■■□□ 2.35
PNKP-216ENST00000601816 NFASCO94856 1347 aa29.71■■■□□ 2.35
PNKP-216ENST00000601816 NRCAMQ92823 1304 aa29.71■■■□□ 2.35
PNKP-216ENST00000601816 CAND2O75155 1236 aa29.71■■■□□ 2.35
PNKP-216ENST00000601816 ARP10275 920 aa29.71■■■□□ 2.35
PNKP-216ENST00000601816 WDR5P61964 334 aaKnown RBP29.71■■■□□ 2.35
PNKP-216ENST00000601816 REXO1Q8N1G1 1221 aaKnown RBP29.71■■■□□ 2.35
PNKP-216ENST00000601816 UPF3BQ9BZI7 483 aaKnown RBP29.71■■■□□ 2.35
PNKP-216ENST00000601816 SMARCAD1Q9H4L7 1026 aa29.71■■■□□ 2.35
PNKP-216ENST00000601816 AGO4Q9HCK5 861 aaKnown RBP29.71■■■□□ 2.35
PNKP-216ENST00000601816 ABHD14A-ACY1A0A1B0GW23 586 aa29.7■■■□□ 2.35
PNKP-216ENST00000601816 KIF28PB7ZC32 967 aa29.7■■■□□ 2.35
PNKP-216ENST00000601816 MEIS1O00470 390 aa29.7■■■□□ 2.35
PNKP-216ENST00000601816 PPFIA3O75145 1194 aa29.7■■■□□ 2.35
PNKP-216ENST00000601816 LGR5O75473 907 aa29.7■■■□□ 2.35
PNKP-216ENST00000601816 MARK3P27448 753 aa29.7■■■□□ 2.35
PNKP-216ENST00000601816 GNA11P29992 359 aa29.7■■■□□ 2.35
PNKP-216ENST00000601816 NIPA1Q7RTP0 329 aa29.7■■■□□ 2.35
PNKP-216ENST00000601816 EFCAB14O75071 495 aa29.69■■■□□ 2.34
PNKP-216ENST00000601816 CA3P07451 260 aa29.69■■■□□ 2.34
PNKP-216ENST00000601816 ADAM17P78536 824 aa29.69■■■□□ 2.34
PNKP-216ENST00000601816 PPFIA1Q13136 1202 aa29.69■■■□□ 2.34
PNKP-216ENST00000601816 IKBKEQ14164 716 aa29.69■■■□□ 2.34
PNKP-216ENST00000601816 TCTN1Q2MV58 587 aa29.69■■■□□ 2.34
PNKP-216ENST00000601816 PHF6Q8IWS0 365 aaKnown RBP eCLIP29.69■■■□□ 2.34
PNKP-216ENST00000601816 CCDC148Q8NFR7 591 aa29.69■■■□□ 2.34
PNKP-216ENST00000601816 CTSHP09668 335 aa29.68■■■□□ 2.34
PNKP-216ENST00000601816 AZI2Q9H6S1 392 aa29.68■■■□□ 2.34
PNKP-216ENST00000601816 CENPBP07199 599 aaPredicted RBP29.67■■■□□ 2.34
PNKP-216ENST00000601816 ACTR2P61160 394 aa29.67■■■□□ 2.34
PNKP-216ENST00000601816 DEFB103AP81534 67 aa29.67■■■□□ 2.34
PNKP-216ENST00000601816 ITGB3BPQ13352 177 aaPredicted RBP29.67■■■□□ 2.34
PNKP-216ENST00000601816 PLA2G4DQ86XP0 818 aa29.67■■■□□ 2.34
PNKP-216ENST00000601816 TRIM22Q8IYM9 498 aa29.67■■■□□ 2.34
PNKP-216ENST00000601816 BICD2Q8TD16 824 aa29.67■■■□□ 2.34
PNKP-216ENST00000601816 ZNF274Q96GC6 653 aaPredicted RBP29.67■■■□□ 2.34
PNKP-216ENST00000601816 CHD9Q3L8U1 2897 aa29.67■■■□□ 2.34
PNKP-216ENST00000601816 ADAMTS3O15072 1205 aa29.66■■■□□ 2.34
PNKP-216ENST00000601816 CYP3A4P08684 503 aa29.66■■■□□ 2.34
PNKP-216ENST00000601816 GRIK4Q16099 956 aa29.66■■■□□ 2.34
PNKP-216ENST00000601816 CRYGNQ8WXF5 182 aa29.66■■■□□ 2.34
PNKP-216ENST00000601816 PCYT2Q99447 389 aa29.66■■■□□ 2.34
PNKP-216ENST00000601816 LARP6Q9BRS8 491 aaKnown RBP29.66■■■□□ 2.34
PNKP-216ENST00000601816 PDRG1Q9NUG6 133 aa29.66■■■□□ 2.34
PNKP-216ENST00000601816 VPS54Q9P1Q0 977 aa29.66■■■□□ 2.34
PNKP-216ENST00000601816 FAM86B1E9PN63 330 aa29.65■■■□□ 2.34
PNKP-216ENST00000601816 CPLX1O14810 134 aa29.65■■■□□ 2.34
PNKP-216ENST00000601816 TLL1O43897 1013 aa29.65■■■□□ 2.34
PNKP-216ENST00000601816 FAM86B2P0C5J1 330 aa29.65■■■□□ 2.34
PNKP-216ENST00000601816 TAF2Q6P1X5 1199 aa29.65■■■□□ 2.34
PNKP-216ENST00000601816 DBF4BQ8NFT6 615 aa29.65■■■□□ 2.34
PNKP-216ENST00000601816 ZBED2Q9BTP6 218 aa29.65■■■□□ 2.34
PNKP-216ENST00000601816 SSRP1Q08945 709 aaKnown RBP29.64■■■□□ 2.34
PNKP-216ENST00000601816 ADGRE1Q14246 886 aa29.64■■■□□ 2.34
PNKP-216ENST00000601816 PLEKHG4Q58EX7 1191 aa29.64■■■□□ 2.34
PNKP-216ENST00000601816 RASGRP4Q8TDF6 673 aa29.64■■■□□ 2.34
PNKP-216ENST00000601816 TUBE1Q9UJT0 475 aa29.64■■■□□ 2.34
PNKP-216ENST00000601816 IGLV3-22A0A075B6J6 115 aa29.63■■■□□ 2.33
PNKP-216ENST00000601816 DDX39AO00148 427 aaKnown RBP29.63■■■□□ 2.33
PNKP-216ENST00000601816 IGFBP4P22692 258 aa29.63■■■□□ 2.33
PNKP-216ENST00000601816 FAM26DQ5JW98 314 aa29.63■■■□□ 2.33
PNKP-216ENST00000601816 CPLX2Q6PUV4 134 aaKnown RBP29.63■■■□□ 2.33
PNKP-216ENST00000601816 RUFY4Q6ZNE9 571 aa29.63■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms